prot_E-siliculosus-1a_M_contig8.16158.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16158.1
Unique Nameprot_E-siliculosus-1a_M_contig8.16158.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length231
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16158.1 vs. uniprot
Match: D8LQC7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQC7_ECTSI)

HSP 1 Score: 440 bits (1131), Expect = 8.760e-156
Identity = 221/230 (96.09%), Postives = 223/230 (96.96%), Query Frame = 0
Query:    1 MVDIQPANLSAARCQHDETDEDHSTVTATASTSSYQSGGSYSSVADTHHYRQAGMSPARAERFAPSQDHAGVQFSPPAPSFPGTPRPSESLMACHRYSRVVRVLAILDAIIVLCGASAFTPLILMIWGPIAGYLASNFRLRAAFTFLFYYGLRISWDIGWILSGGIKWVVVWVFLFTDVAASGLVYFFVVLLCRCSTAEVEHLRDPNTAWASAFFPLSVGATPFGGSPDD 230
            MVDI+PANLSAARCQHDE DEDHSTVTAT STSSYQSGGSYSSVADTHHYRQAGM PAR ER APSQDH GVQFSPPAPSFPGTPRPSESLMACHRYSRVVRVLAILDAIIVLCGASAFTPLILMIWGPIAGYLASNFRLRAAFTFLFYYGLRISWDIGWILSGGIKWVVVWVFLFTDVAASGLVYFFVVLLCRCSTAEVEHLRDPNTAWASAFFPLSVGATPF GSPD+
Sbjct:    1 MVDIRPANLSAARCQHDEMDEDHSTVTATPSTSSYQSGGSYSSVADTHHYRQAGMGPARTERLAPSQDHTGVQFSPPAPSFPGTPRPSESLMACHRYSRVVRVLAILDAIIVLCGASAFTPLILMIWGPIAGYLASNFRLRAAFTFLFYYGLRISWDIGWILSGGIKWVVVWVFLFTDVAASGLVYFFVVLLCRCSTAEVEHLRDPNTAWASAFFPLSVGATPFEGSPDN 230          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16158.1 vs. uniprot
Match: A0A6V1TFA5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TFA5_HETAK)

HSP 1 Score: 65.9 bits (159), Expect = 2.110e-9
Identity = 43/124 (34.68%), Postives = 68/124 (54.84%), Query Frame = 0
Query:   91 LMACHRYSRVVRVLAILDAIIVLCGASAFTPLILMIWGPIAGYLASN-FRLRAAFTFLFYYGLRISWDIGWILSGGIKWVVVWVFLFTDVAASGLVYFFVVLLCRCSTAEVEHLRDPNTAWASA 213
            L+  +   R VRV+A++D +I+L     F    +++WGP+AGYL S+ FR      +  YY L+++ DI +IL G   ++ V   L  D+  +  VY    LL   + AE+E LR P+  W+ A
Sbjct:  102 LLETYSLGRGVRVIALIDGMILLFDCLLFPVFFVLMWGPLAGYLGSSYFRFSFVTCYFLYYVLKMAADIIFILYGAWWFLAV---LVIDLWIARWVYMLAALLWVANPAELEALRAPSHMWSRA 222          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16158.1 vs. uniprot
Match: A0A6H5KAV0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KAV0_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 1.920e-7
Identity = 45/158 (28.48%), Postives = 79/158 (50.00%), Query Frame = 0
Query:   72 VQFSPPAPSFPGTPRPSES-LMACHRYSRVVRVLAILDAIIVLCGASAFTPLILMI-WGPIAGYLASNFRLRAAFTFLF--YYGLRISWDIGWILSGGIKWVVVWVFLFT-DVAASGLVYFFVVLLCRCSTAEVEHLRDPNTAWASAFFPLSVGATPF 224
            V F P      G   P E+ LM     ++ +R LA+ D +I++     F  L+L++ WGP++G++A   R   A+T+ +  YY LR+S  + ++  G   ++    FLF   +  + +++ F  +L   S AE+E LR+P   W+  +        PF
Sbjct:   80 VPFDPADLGVAGFMAPHEAKLMEASSLAKTIRWLAVFDGLILVINCGYFPMLLLLLLWGPLSGWMAGT-RYSTAWTYAYCCYYLLRLSTYLSYVFEGYFWFI----FLFALSLYIARVIWRFAKVLDTLSPAEIEQLRNPTAVWSGQYRRQHQNQQPF 232          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16158.1 vs. uniprot
Match: A0A836CJB9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJB9_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 8.140e-6
Identity = 40/133 (30.08%), Postives = 68/133 (51.13%), Query Frame = 0
Query:   89 ESLMACHRYSRVVRVLAILDAIIV------LCGASAFTPLILMIWGPIAGYL-ASNFRLRAAFTFLFYYGLRISWDIGWILSGGIKWVVVWVFLFTDVAASGLVYFFVVLLCRCSTAEVEHLRD-PNTAWASA 213
            E LM  +  +R ++VL+++DAI++        G   F  ++ + WGP  GY  A ++ + +A  +L YY +++  D+G +   G  W ++   L  D      VY +   L   S +E+E L+  PN AW SA
Sbjct:   45 ERLMETYSLARSIKVLSMIDAILLTFNAVFFWGPLFFIVMLALAWGPACGYYSAKHYHIHSARGYLVYYVIKVLTDVGRLFVAGF-WSIIP--LAIDSYIGRCVYVYCKRLTEASPSELEGLQSSPNPAWESA 174          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16158.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LQC7_ECTSI8.760e-15696.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6V1TFA5_HETAK2.110e-934.68Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6H5KAV0_9PHAE1.920e-728.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CJB9_9STRA8.140e-630.08Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..99
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 100..126
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 127..137
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 157..167
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 193..230
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 138..156
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 168..192
NoneNo IPR availableTMHMMTMhelixcoord: 169..191
NoneNo IPR availableTMHMMTMhelixcoord: 140..162
NoneNo IPR availableTMHMMTMhelixcoord: 103..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:1465166..1468184 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16158.1mRNA_E-siliculosus-1a_M_contig8.16158.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig8 1465120..1468210 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig8.16158.1 ID=prot_E-siliculosus-1a_M_contig8.16158.1|Name=mRNA_E-siliculosus-1a_M_contig8.16158.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=231bp
MVDIQPANLSAARCQHDETDEDHSTVTATASTSSYQSGGSYSSVADTHHY
RQAGMSPARAERFAPSQDHAGVQFSPPAPSFPGTPRPSESLMACHRYSRV
VRVLAILDAIIVLCGASAFTPLILMIWGPIAGYLASNFRLRAAFTFLFYY
GLRISWDIGWILSGGIKWVVVWVFLFTDVAASGLVYFFVVLLCRCSTAEV
EHLRDPNTAWASAFFPLSVGATPFGGSPDD*
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