prot_E-siliculosus-1a_M_contig8.16113.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16113.1
Unique Nameprot_E-siliculosus-1a_M_contig8.16113.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length264
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16113.1 vs. uniprot
Match: A0A6H5K4V2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4V2_9PHAE)

HSP 1 Score: 419 bits (1078), Expect = 1.290e-146
Identity = 225/263 (85.55%), Postives = 234/263 (88.97%), Query Frame = 0 
Query:    1 MENIRSNIEHGATVLQSYVSSLQVRTDTKFSLLLGMLLGLSVVAAIAAYPGKPIDYTGVGIELPPEMRGEETVGVAKKVDGEGSAGAVDEQKPAGLQQIQGVVDNLSQLRRRXXXXXXXXXXXXXXXXLVNTTTESQSKQTGNAGDEAGRAEWDASRLDEDKLARKIGSSKAARMLGLTEDQVRQAVADAKQELEQSNSGPSGGSPARDNNDDGVGFSGSLSLGMLLVGLWALWAHLSAYPHGTLSRFLVGVFPREMETLGLA 263
            MENI S IE GATVLQSYVSSLQVRTDTKFSLLLG+LLGLSVV AIA+YPGKPIDYTGVGI+LPPEMRGEETVGVAKK+D  GS GAVDEQKPAGLQQIQGVVDNLSQLRRR                LVNTTTESQ K+TGNA DEAGRAEWDA RLDEDKLARKIGSSKAARMLGLTEDQVRQAVADAKQELEQS+SGP+GGSPARD+NDDGVGFSG LSL MLLVG+WALWAHLSAYPHGTL RFLVGVFPREMETLGLA
Sbjct:    1 MENILSKIEDGATVLQSYVSSLQVRTDTKFSLLLGILLGLSVVVAIASYPGKPIDYTGVGIDLPPEMRGEETVGVAKKLDQAGSVGAVDEQKPAGLQQIQGVVDNLSQLRRRKRAKNTPSSAAAGEESLVNTTTESQIKETGNAEDEAGRAEWDARRLDEDKLARKIGSSKAARMLGLTEDQVRQAVADAKQELEQSSSGPAGGSPARDSNDDGVGFSGFLSLAMLLVGMWALWAHLSAYPHGTLCRFLVGVFPREMETLGLA 263
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K4V2_9PHAE1.290e-14685.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..49
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 50..214
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 215..237
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 238..263
NoneNo IPR availableTMHMMTMhelixcoord: 30..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:980665..983087 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16113.1mRNA_E-siliculosus-1a_M_contig8.16113.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig8 980566..983561 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig8.16113.1 ID=prot_E-siliculosus-1a_M_contig8.16113.1|Name=mRNA_E-siliculosus-1a_M_contig8.16113.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=264bp
MENIRSNIEHGATVLQSYVSSLQVRTDTKFSLLLGMLLGLSVVAAIAAYP
GKPIDYTGVGIELPPEMRGEETVGVAKKVDGEGSAGAVDEQKPAGLQQIQ
GVVDNLSQLRRRKRAKNPPSSAAAGEESLVNTTTESQSKQTGNAGDEAGR
AEWDASRLDEDKLARKIGSSKAARMLGLTEDQVRQAVADAKQELEQSNSG
PSGGSPARDNNDDGVGFSGSLSLGMLLVGLWALWAHLSAYPHGTLSRFLV
GVFPREMETLGLA*
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