prot_E-siliculosus-1a_M_contig8.16084.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16084.1
Unique Nameprot_E-siliculosus-1a_M_contig8.16084.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length347
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16084.1 vs. uniprot
Match: A0A6H5KXE1_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXE1_9PHAE)

HSP 1 Score: 633 bits (1632), Expect = 2.920e-228
Identity = 330/346 (95.38%), Postives = 338/346 (97.69%), Query Frame = 0
Query:    1 MFGLTQVARRPAVALAVAGGASACMLSNTYLNKSEREQGALCQAPNAPQSGMKGVAQRLGSYVQNIEDPDKITLRADKLGVKVYDVVDQAAHKAAGGLPVVRVAQALIKAPVEDVALCWWQAGRRKEWDSVNTSDSQLVRSLAPDARLVYMQGKPKRGGMISSRDFCYVSHKAPLELVGAKPGSTLFVQANAANEVPPNNASTRGDVNSVLLLVPIDPITTKAYYAIEMDVKGWLPVKVVKAAADEIPLTLAVLRDHIEKELSEEASLSPEAAAKHAIHRREGSEGKSSGGSIAGAWATREDLLETKKLLENQLKKASADERKMGIDLSALRKHIKEEIAEVDRRL 346
            MFGLTQVARRPAVALAVAGGASACML NTYL+KSE+EQGALCQAPNAPQSGMKGVAQRLG+YVQNIEDPDKITLRA+KLGVKVYDVVDQAAHKAAGGLPVVRVAQALIKAPV+DVALCWWQAGRRKEWDSVNTSDSQLVRSLAPDARLVYMQGKPKRGGMISSRDFCYVSHKAPLELVGAKPGSTLFVQANAANEVP NNASTRGDVNSVLLLVP+DPITT+AYYAIEMDVKGWLPVKVVKAAADEIPLTLAVLRDHIEKELSEEASLSPEAAAKHA+HRRE SEGKS G SIAGAWATREDLLETKKLLE QLKK SADERKMGIDLS LRKHIKEEIAEVDRRL
Sbjct:    1 MFGLTQVARRPAVALAVAGGASACMLRNTYLDKSEQEQGALCQAPNAPQSGMKGVAQRLGAYVQNIEDPDKITLRANKLGVKVYDVVDQAAHKAAGGLPVVRVAQALIKAPVDDVALCWWQAGRRKEWDSVNTSDSQLVRSLAPDARLVYMQGKPKRGGMISSRDFCYVSHKAPLELVGAKPGSTLFVQANAANEVPLNNASTRGDVNSVLLLVPVDPITTRAYYAIEMDVKGWLPVKVVKAAADEIPLTLAVLRDHIEKELSEEASLSPEAAAKHAVHRREDSEGKSGGESIAGAWATREDLLETKKLLEKQLKKVSADERKMGIDLSELRKHIKEEIAEVDRRL 346          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16084.1 vs. uniprot
Match: D8LQJ8_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQJ8_ECTSI)

HSP 1 Score: 481 bits (1238), Expect = 9.900e-170
Identity = 244/251 (97.21%), Postives = 250/251 (99.60%), Query Frame = 0
Query:   25 MLSNTYLNKSEREQGALCQAPNAPQSGMKGVAQRLGSYVQNIEDPDKITLRADKLGVKVYDVVDQAAHKAAGGLPVVRVAQALIKAPVEDVALCWWQAGRRKEWDSVNTSDSQLVRSLAPDARLVYMQGKPKRGGMISSRDFCYVSHKAPLELVGAKPGSTLFVQANAANEVPPNNASTRGDVNSVLLLVPIDPITTKAYYAIEMDVKGWLPVKVVKAAADEIPLTLAVLRDHIEKELSEEASLSPEAAAK 275
            MLSNTYL+KSER+QGALCQAPNAPQSGMKGVAQRLG+YVQNIED DKITLRADKLGVKVYDVVDQAAHKAAGGLPVVRVAQALIKAPVEDVALCWWQAGRRKEWDSVNTSDSQLVRSLAPDARLVYMQGKPKRGGMISSRDFCYVSHKAPLELVGAKPGSTLFVQANAANEVPPNNASTRGDVNSVLLLVP+DPITT+AYYAIEMDVKGWLPVKVVKAAADEIPLTLAVLRDHIEKELS+EASLSPEAAAK
Sbjct:    1 MLSNTYLDKSERDQGALCQAPNAPQSGMKGVAQRLGAYVQNIEDSDKITLRADKLGVKVYDVVDQAAHKAAGGLPVVRVAQALIKAPVEDVALCWWQAGRRKEWDSVNTSDSQLVRSLAPDARLVYMQGKPKRGGMISSRDFCYVSHKAPLELVGAKPGSTLFVQANAANEVPPNNASTRGDVNSVLLLVPVDPITTRAYYAIEMDVKGWLPVKVVKAAADEIPLTLAVLRDHIEKELSDEASLSPEAAAK 251          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16084.1 vs. uniprot
Match: A0A835YTY3_9STRA (START domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTY3_9STRA)

HSP 1 Score: 266 bits (681), Expect = 4.590e-85
Identity = 134/224 (59.82%), Postives = 167/224 (74.55%), Query Frame = 0
Query:   41 LCQAPNAPQSGMKGVAQRLGSYVQNI---EDPDKITLRADKLGVKVYDVVDQAAHKAAGGLPVVRVAQALIKAPVEDVALCWWQAGRRKEWDSVNTSDSQLVRSLAPDARLVYMQGKPKRGGMISSRDFCYVSHKAPLELVGAKPGSTLFVQANAANEVPPNNASTRGDVNSVLLLVPIDPITTKAYYAIEMDVKGWLPVKVVKAAADEIPLTLAVLRDHIEKE 261
            L  A +AP + +K V  RLG  V ++   E    +T R D  GV +Y V ++AAH  AGGLPVVRVA+A+IKAPV +VA  WW    RK+WDSVNT D QLV++L  D RLVY+QGKPKRGG+ISSRDF YV H+ P + +GA+ GS LF+Q N A+EVP N++S RGDVNS+LLL P+D  TT+A YAIE+DVKGWLP KVV AAADE PLTLAV+RDH+E++
Sbjct:   35 LAAACDAPGASVKSVTARLGRLVVDVPTLEATKVLTRRTDLNGVTIYSVTNEAAHSKAGGLPVVRVAEAVIKAPVAEVAALWWHVQSRKDWDSVNTQDCQLVKALGTDERLVYLQGKPKRGGVISSRDFAYVMHRVPAQELGARTGSALFIQTNTASEVPANSSSVRGDVNSLLLLEPLDATTTRARYAIEIDVKGWLPTKVVNAAADETPLTLAVMRDHLERQ 258          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16084.1 vs. uniprot
Match: A0A4D9DBA7_9STRA (START domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DBA7_9STRA)

HSP 1 Score: 197 bits (500), Expect = 4.530e-56
Identity = 120/309 (38.83%), Postives = 177/309 (57.28%), Query Frame = 0
Query:   43 QAPNAPQSGMKGVAQRLGSYVQNIEDPDKITLRADKLGVKVYDVV-----DQAAHKAAGGLPVVRVAQALIKAPVEDVALCWWQAGRRKEWDSVNTSDSQLVRSLAPDARLVYMQGKPKRGGMISSRDFCYVSHKAPLELVGAKPGSTLFVQANAANEVPPNNASTRGDVNSVLLLVPIDPITTKAYYAIEMDVKGWLPVKVVKAAADEIPLTLAVLRDHIEKELSEEASLSPEAAAKHAIHRREGSEGKSSGGSIAGAWATREDLLETKKLLENQLKKASADERKMGIDLSALRKHIKEEIAEVDRRL 346
            Q P    +    +  R+  Y       +    + +K GVK+Y V      D A      GLPV R+ +A+I AP+E VA  WW    R  WD VNT  S++V     +ARLVY++G PK   MISSRDF +VSHK P   +G   G+  FVQ NAAN +P N+ + RG++NS++LL P+D  TT+  Y  E++ KGWLP   V+AAAD++P  L V++ H+E E +E+A    EA  +     RE  +  +    +    A+REDLL  KKLL+ +L++A  DE+K+ + L+ L+  I+ ++ +V+ RL
Sbjct:  100 QQPATDPADTDSIVFRMQKYFTTASLEEVAKFKKEKAGVKIYTVKEGSIPDPAIGGRKTGLPVARIGEAVINAPLEQVATLWWVFNGRILWDKVNTLASEVVEEYK-NARLVYIKGTPKP--MISSRDFVFVSHKVPAGDLGGSFGAQAFVQTNAANSLPENSGAVRGNINSIILLEPVDGYTTRVRYVCEIEPKGWLPTMAVEAAADDLPGVLGVMKAHLESEATEDA----EALVRRRASLRE--KDHTHPLLVDSVTASREDLLALKKLLQTKLEEAKRDEKKLNLSLAELKSKIQNDLKKVEARL 399          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16084.1 vs. uniprot
Match: W7TWL2_9STRA (Lipid-binding START n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWL2_9STRA)

HSP 1 Score: 138 bits (348), Expect = 4.090e-36
Identity = 78/187 (41.71%), Postives = 119/187 (63.64%), Query Frame = 0
Query:  160 MISSRDFCYVSHKAPLELVGAKPGSTLFVQANAANEVPPNNASTRGDVNSVLLLVPIDPITTKAYYAIEMDVKGWLPVKVVKAAADEIPLTLAVLRDHIEKELSEEASLSPEAAAKHAIHRREGSEGKSSGGSIAGAWATREDLLETKKLLENQLKKASADERKMGIDLSALRKHIKEEIAEVDRRL 346
            MISSRDF +VSHK P   +G   G+  FVQ NAAN +P N+ + RG++NS++LL P+D  TT+  Y  E++ KGWLP   V+AAAD++P  L V++ H+E E +E+A    EA  +     RE  +  +    +    A+REDLL  KKLL+ +L++A  DE+K+ + L+ L+  I+ ++ +V+ RL
Sbjct:    1 MISSRDFVFVSHKVPAGDLGGSFGAQAFVQTNAANTLPENSGAVRGNINSIILLEPVDGYTTRVRYVCEIEPKGWLPTMAVEAAADDLPGVLGVMKAHLESEATEDA----EALVRRRASLRE--KDHTHPLLVDSVTASREDLLALKKLLQTKLEEAKRDEKKLNLSLAELKSKIQNDLKKVEARL 181          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16084.1 vs. uniprot
Match: A0A7S1U9K1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9K1_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.680e-13
Identity = 74/270 (27.41%), Postives = 132/270 (48.89%), Query Frame = 0
Query:  101 VRVAQALIKAPVEDVALCWWQAGR-RKEWDS-VNTSDSQLVRSLAPDA---RLVYMQGKPK---RGGMISSRDFCYVSHKAPLELVGAKP----GSTLFVQANAANEVPPNNASTRGDVNSVLLLVPIDPIT-TKAYYAIEMDVKGW--------LPVKVVKAAADEIPLTLAVLRDHIEKELSEEASLSPEAAAKHAIHRREGSEGKSSGGSIA---GAWATREDLLETKKLLENQLKKASADERKMGIDLSALRKHIKEEIAEVDRRL 346
            + + +  ++AP+++VA   W +G  R++WD  V  S +  +  L  DA   R VY++ +     RG  +  RDFC+   + P  ++G        + L+V  +A + + P     R  VN +L+L PI   T T+    +EM+  GW        L     +AA ++    L+ L+  +E  + +  +   E AA  A+ R  G        S+    GA+ ++++L   +  L+ + K+ +ADE K+GI L+ L+K +  +I  V+RRL
Sbjct:  145 ITIVEGTVRAPLKEVATAVWHSGAAREQWDPRVERSQAIELPELELDADQLRTVYLRQRGAAGWRGWWLRDRDFCFTLARTPAGVLGRGTKESFATDLYVLVDAEDAIAPEPGVCRAKVNGLLVLRPIAAGTLTQVVLVLEMEPHGWHGALNAVGLGYPKHRAAEED----LSTLKAFVEDVMDDAMNAKDEMAAGEAMKRLTGEVKDVQSASLVNAVGAYVSKDELKALRDTLKARRKQIAADEAKLGIKLTDLKKQVDRDIRTVERRL 410          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16084.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KXE1_9PHAE2.920e-22895.38START domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LQJ8_ECTSI9.900e-17097.21START domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835YTY3_9STRA4.590e-8559.82START domain-containing protein n=1 Tax=Tribonema ... [more]
A0A4D9DBA7_9STRA4.530e-5638.83START domain-containing protein n=2 Tax=Monodopsid... [more]
W7TWL2_9STRA4.090e-3641.71Lipid-binding START n=1 Tax=Nannochloropsis gadita... [more]
A0A7S1U9K1_9STRA1.680e-1327.41Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 300..320
NoneNo IPR availablePANTHERPTHR19308PHOSPHATIDYLCHOLINE TRANSFER PROTEINcoord: 123..289
NoneNo IPR availablePANTHERPTHR19308:SF14coord: 123..289
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..346
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 102..260
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 53..267
e-value: 9.0E-23
score: 82.8
IPR002913START domainPFAMPF01852STARTcoord: 97..242
e-value: 6.9E-6
score: 25.6
IPR002913START domainPROSITEPS50848STARTcoord: 125..243
score: 10.49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:612273..619009 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16084.1mRNA_E-siliculosus-1a_M_contig8.16084.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig8 611757..619097 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig8.16084.1 ID=prot_E-siliculosus-1a_M_contig8.16084.1|Name=mRNA_E-siliculosus-1a_M_contig8.16084.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=347bp
MFGLTQVARRPAVALAVAGGASACMLSNTYLNKSEREQGALCQAPNAPQS
GMKGVAQRLGSYVQNIEDPDKITLRADKLGVKVYDVVDQAAHKAAGGLPV
VRVAQALIKAPVEDVALCWWQAGRRKEWDSVNTSDSQLVRSLAPDARLVY
MQGKPKRGGMISSRDFCYVSHKAPLELVGAKPGSTLFVQANAANEVPPNN
ASTRGDVNSVLLLVPIDPITTKAYYAIEMDVKGWLPVKVVKAAADEIPLT
LAVLRDHIEKELSEEASLSPEAAAKHAIHRREGSEGKSSGGSIAGAWATR
EDLLETKKLLENQLKKASADERKMGIDLSALRKHIKEEIAEVDRRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002913START_lipid-bd_dom
IPR023393START-like_dom_sf