prot_E-siliculosus-1a_M_contig8.16074.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16074.1
Unique Nameprot_E-siliculosus-1a_M_contig8.16074.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length439
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16074.1 vs. uniprot
Match: A0A6H5KYI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYI0_9PHAE)

HSP 1 Score: 763 bits (1970), Expect = 1.100e-276
Identity = 413/438 (94.29%), Postives = 421/438 (96.12%), Query Frame = 0 
Query:    1 MVSSGWNCAAWSKGEQAKVLQLVIVSVCWLFLQIEGGSPGTTAVLFTLAVYLVPTKRRRPSRSPPKSFWPDALSSAENGNNARSREIAANLLLTGELEAYFDKSSDEVRRQAPGTSTQESAPAAATPNNTASSAQGNPFEEALTRLAGAASTCGTEPLIYVRRADVAAIVDALMDVVRTPAGPNVTSPAFARLNLVRRSVRKDPRGGRRALSPVRRGERAALAFHRGRPGRGXXXXXXXXXXXGGRRAVSASPSLSRGAPTIAPSGGKALFQDSNMITPPRVLTRPSPASTKITFRPRSPPPPSPSGDGEPVGNSTVGARRIRGGMEGRQHRVLQRVHSPRAFSMTPIALAKNNEAPLSAAGASVTSGDEGGNQSGVMRSTDEKKQTTLKPPALITTMMHDGCDVTPCSTASDRKKIRCVPAKGEGSDFDDFWSSGWG 438
            MVSSGWNC AWSKGEQAKVLQLVIVSVCWLFLQIEGGSPGTTAVLFTLAVYLVPTKR RPSR+PPKSFWPDALSSAENGN+ARS EIAANLLLTGELEA+ DKSSD VRRQAPGTSTQESAPAAATPNNTASSA+GNPFEEALTRLAGAASTCGTEPLIYVRRADVA IVDALMDVVRTPAGP VTSPAFARLNLVRRS RKDPRGGRRALSPVRRGERAALAFHRGRPGRGXXXXXXXXXXX  RRAVSASPS+SRGAPTIAP GGKALFQDSNM+TPPRVL RPSPASTKITFRPRSPPPPSPSGDGEPVGNSTVGARRIRGGMEG+QHRVLQRVHSPRAFSMTPIALAKNNEAPLSAAGA VTSG EGG+QSGVMRSTDEKKQT LKPPALITTMM DGCDVTPCSTASDRKKIRCVPAKGE SDFDDFWSSGWG
Sbjct:    1 MVSSGWNCPAWSKGEQAKVLQLVIVSVCWLFLQIEGGSPGTTAVLFTLAVYLVPTKRHRPSRNPPKSFWPDALSSAENGNSARSCEIAANLLLTGELEAFLDKSSDGVRRQAPGTSTQESAPAAATPNNTASSARGNPFEEALTRLAGAASTCGTEPLIYVRRADVAVIVDALMDVVRTPAGPTVTSPAFARLNLVRRSGRKDPRGGRRALSPVRRGERAALAFHRGRPGRGXXXXXXXXXXXX-RRAVSASPSMSRGAPTIAPPGGKALFQDSNMMTPPRVLARPSPASTKITFRPRSPPPPSPSGDGEPVGNSTVGARRIRGGMEGKQHRVLQRVHSPRAFSMTPIALAKNNEAPLSAAGALVTSGGEGGSQSGVMRSTDEKKQTKLKPPALITTMMQDGCDVTPCSTASDRKKIRCVPAKGEASDFDDFWSSGWG 437
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16074.1 vs. uniprot
Match: D8LQL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQL1_ECTSI)

HSP 1 Score: 295 bits (756), Expect = 1.110e-95
Identity = 171/180 (95.00%), Postives = 173/180 (96.11%), Query Frame = 0 
Query:   87 IAANLLLTGELEAYFDKSSDEVRRQAPGTSTQESAPAAATPNNTASSAQGNPFEEALTRLAGAASTCGTEPLIYVRRADVAAIVDALMDVVRTPAGPNVTSPAFARLNLVRRSVRKDPRGGRRALSPVRRGERAALAFHRGRPGRGXXXXXXXXXXXGGRRAVSASPSLSRGAPTIAPSG 266
            +AANLLLTGELEA+FDKSSD VRRQAPGTSTQESAPAAATPNNTASSAQGNPFEEALTRLAGAASTCGTEPLIYVRRADVAAIVDALMDVVRTPAGP VTSPAFARLNLVRRS RKD RGGRRALSPVRRGERAALAFHRGRPGRG  XXXXXXXX GGRRAVSASPSLSRGAPTIAPSG
Sbjct:    1 MAANLLLTGELEAFFDKSSDGVRRQAPGTSTQESAPAAATPNNTASSAQGNPFEEALTRLAGAASTCGTEPLIYVRRADVAAIVDALMDVVRTPAGPTVTSPAFARLNLVRRSGRKDSRGGRRALSPVRRGERAALAFHRGRPGRGDGXXXXXXXXSGGRRAVSASPSLSRGAPTIAPSG 180
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16074.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KYI0_9PHAE1.100e-27694.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQL1_ECTSI1.110e-9595.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 54..438
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:448583..455265 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16074.1mRNA_E-siliculosus-1a_M_contig8.16074.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig8 448401..455463 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig8.16074.1 ID=prot_E-siliculosus-1a_M_contig8.16074.1|Name=mRNA_E-siliculosus-1a_M_contig8.16074.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=439bp
MVSSGWNCAAWSKGEQAKVLQLVIVSVCWLFLQIEGGSPGTTAVLFTLAV
YLVPTKRRRPSRSPPKSFWPDALSSAENGNNARSREIAANLLLTGELEAY
FDKSSDEVRRQAPGTSTQESAPAAATPNNTASSAQGNPFEEALTRLAGAA
STCGTEPLIYVRRADVAAIVDALMDVVRTPAGPNVTSPAFARLNLVRRSV
RKDPRGGRRALSPVRRGERAALAFHRGRPGRGGGGGGGGGEDSGGRRAVS
ASPSLSRGAPTIAPSGGKALFQDSNMITPPRVLTRPSPASTKITFRPRSP
PPPSPSGDGEPVGNSTVGARRIRGGMEGRQHRVLQRVHSPRAFSMTPIAL
AKNNEAPLSAAGASVTSGDEGGNQSGVMRSTDEKKQTTLKPPALITTMMH
DGCDVTPCSTASDRKKIRCVPAKGEGSDFDDFWSSGWG*
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