prot_E-siliculosus-1a_M_contig8.16050.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig8.16050.1
Unique Name	prot_E-siliculosus-1a_M_contig8.16050.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	501

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig8.16050.1 vs. uniprot
Match: D8LQM8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQM8_ECTSI)

HSP 1 Score: 882 bits (2280), Expect = 0.000e+0
Identity = 433/460 (94.13%), Postives = 439/460 (95.43%), Query Frame = 0

Query:   44 MAPTATFSTLPLGPLGTVVLYLTVADMAQLIGANKEMNTSALDSPEFWRERCCGTFGRHVDYIESVGKNEFLAFHMAKVLMLPGESKTNSLLPGTEAFERSVWTRQLLSFSVGASSQDRNDEGPSHTLFESRCARMLEDMRCWRMPREAVASIGKRCQSDCGCVWLDKCYWSSEPSPTADKEEWLDYDMQENTVAVVSSFMLTPYTSFWQPEQPTYNPIEACFQLMHPQIDGGKTPYYESPRFFVDPHMKRQQYNLPRPIVSFGGRVRIRLLGMAQRQTLPESMGATANHYHTCISYVALCGTFLLSCSIANHPDGPANRSAKIPPVATIGKGR---RGGXXXEDVDQGGGAAGPINGKEKTNDKLRMRWAVLVHVYPASKPDKEAALDHNGEKKPLKVKVFSDTPCLELLELYSKMYFPDEERARLVLTGGMELPAEDGKLVGEFAVHGKLSLVDPSRQ 500
            MAPTATFSTLPLGPLGTVVLYLTVADMAQLIG NKEMNTSALDSPEFWRERCCGTFGRHVDYIESVGKNEFLAFHMAKVLMLPGESKTNS LPGTEAFERSVWTRQLLSFSVGASSQDRNDEGPSHTLFESRCARMLEDMRC +MPREAVASIGKRCQSDCGCVWLDKCYWSSEPSPTADKEEWLDYDMQENTVAV  SFMLTPYTSFWQPEQPTYNPIEACFQLMHPQIDGGKTPYYESPRFFVDPHMKRQQ+NLPRPIVSFGGRVRIRLLGMAQRQTLPES+GATANHYHTCISY ALCGTFLLSCSIANHPDGPA+RSAKIPPVATIGKGR      XXXEDVDQGGGA  PIN  EK NDKLRMRWAVLVHVYPA+K D EAALD+NGEKKPLKVKVF DTPCLELLELYSKMYFPDEERARLVL GGMELPAEDGKLVGEFAVHGKLSLVDPSRQ
Sbjct:    1 MAPTATFSTLPLGPLGTVVLYLTVADMAQLIGTNKEMNTSALDSPEFWRERCCGTFGRHVDYIESVGKNEFLAFHMAKVLMLPGESKTNSRLPGTEAFERSVWTRQLLSFSVGASSQDRNDEGPSHTLFESRCARMLEDMRCGKMPREAVASIGKRCQSDCGCVWLDKCYWSSEPSPTADKEEWLDYDMQENTVAVAVSFMLTPYTSFWQPEQPTYNPIEACFQLMHPQIDGGKTPYYESPRFFVDPHMKRQQFNLPRPIVSFGGRVRIRLLGMAQRQTLPESVGATANHYHTCISYAALCGTFLLSCSIANHPDGPASRSAKIPPVATIGKGRGXXXXXXXXEDVDQGGGATSPINRIEKNNDKLRMRWAVLVHVYPANKSDNEAALDNNGEKKPLKVKVFGDTPCLELLELYSKMYFPDEERARLVLAGGMELPAEDGKLVGEFAVHGKLSLVDPSRQ 460

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig8.16050.1 vs. uniprot
Match: A0A6H5L798_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L798_9PHAE)

HSP 1 Score: 469 bits (1206), Expect = 1.230e-162
Identity = 222/237 (93.67%), Postives = 227/237 (95.78%), Query Frame = 0

Query:   44 MAPTATFSTLPLGPLGTVVLYLTVADMAQLIGANKEMNTSALDSPEFWRERCCGTFGRHVDYIESVGKNEFLAFHMAKVLMLPGESKTNSLLPGTEAFERSVWTRQLLSFSVGASSQDRNDEGPSHTLFESRCARMLEDMRCWRMPREAVASIGKRCQSDCGCVWLDKCYWSSEPSPTADKEEWLDYDMQENTVAVVSSFMLTPYTSFWQPEQPTYNPIEACFQLMHPQIDGGKTPY 280
            MAPTATFSTLPLGPL TVVLYLTVADMAQLIG NKEMNTSALDSPEFWRERCCGTFGRHVD+IESVGKNEF AFHMAK+LMLPGESKTNS L GTEAFER VWTRQLLS SVGASSQDRNDEGPSHTLFESRCARML+DM C RMPREA+ASIGKRCQSDCGCVWLDKCYWSSEPSPTADKEEWLDYDMQENTVAVV SFMLTPYTSFWQPEQPTYNPIEACFQLMHPQ+DGGKTPY
Sbjct:    1 MAPTATFSTLPLGPLATVVLYLTVADMAQLIGTNKEMNTSALDSPEFWRERCCGTFGRHVDHIESVGKNEFRAFHMAKMLMLPGESKTNSWLSGTEAFERDVWTRQLLSSSVGASSQDRNDEGPSHTLFESRCARMLQDMPCERMPREALASIGKRCQSDCGCVWLDKCYWSSEPSPTADKEEWLDYDMQENTVAVVVSFMLTPYTSFWQPEQPTYNPIEACFQLMHPQVDGGKTPY 237

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig8.16050.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig8.16050.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LQM8_ECTSI	0.000e+0	94.13	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L798_9PHAE	1.230e-162	93.67	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR39741:SF2		coord: 147..348
None	No IPR available	PANTHER	PTHR39741	FAMILY NOT NAMED	coord: 147..348

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig8	contig	E-siliculosus-1a_M_contig8:254384..260496 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig8.16050.1	mRNA_E-siliculosus-1a_M_contig8.16050.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig8 252840..262903 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig8.16050.1 ID=prot_E-siliculosus-1a_M_contig8.16050.1|Name=mRNA_E-siliculosus-1a_M_contig8.16050.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=501bp
MSTPDAAAATTTTTSSVGAIETVAAAAVGATSAVDATTTTIVRMAPTATF
STLPLGPLGTVVLYLTVADMAQLIGANKEMNTSALDSPEFWRERCCGTFG
RHVDYIESVGKNEFLAFHMAKVLMLPGESKTNSLLPGTEAFERSVWTRQL
LSFSVGASSQDRNDEGPSHTLFESRCARMLEDMRCWRMPREAVASIGKRC
QSDCGCVWLDKCYWSSEPSPTADKEEWLDYDMQENTVAVVSSFMLTPYTS
FWQPEQPTYNPIEACFQLMHPQIDGGKTPYYESPRFFVDPHMKRQQYNLP
RPIVSFGGRVRIRLLGMAQRQTLPESMGATANHYHTCISYVALCGTFLLS
CSIANHPDGPANRSAKIPPVATIGKGRRGGGGGEDVDQGGGAAGPINGKE
KTNDKLRMRWAVLVHVYPASKPDKEAALDHNGEKKPLKVKVFSDTPCLEL
LELYSKMYFPDEERARLVLTGGMELPAEDGKLVGEFAVHGKLSLVDPSRQ
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