prot_E-siliculosus-1a_M_contig8.16044.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16044.1
Unique Nameprot_E-siliculosus-1a_M_contig8.16044.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length541
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16044.1 vs. uniprot
Match: D8LQN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN3_ECTSI)

HSP 1 Score: 820 bits (2117), Expect = 2.000e-295
Identity = 444/533 (83.30%), Postives = 455/533 (85.37%), Query Frame = 0 
Query:    1 MKAAAKRAKRARDSRARDTDCSSVTSTSTLDDSHHRLQHHPLEPSTTIKHIKYDAGAYEGFEEEKERDQLNPEQTANGTDFTGIQVPEGAPKDLLCEECERRNAVGFCEDCGEALCAACLAILHIPSTGGQAHPHLAQARTKRTTSFEGIRSLRAGDESSILREEEDPIPAHEIDEDEMATRRDLSVPTSLEAPTIDLTSSTAKRNAAEPLHKEGQLVVFRAALADSLPDHLAGDDEEEACEDHEHVMSVRRRGSRPRELYGEVISVPMARHGEWGHARRRTQGHRLLVRVRVLGRASGGYSEPFVEEWQRRKHQREGPREPVKITGGSGADPLAREVGAAKSKDVRREGVRRTCVLPEKELPLINPPPLPTNTSIAPTPATAKAGTTFKKTRSGVGAAGRSRSLESGTVGGVAGDDREGQALVVLVPEEELFAVEVKREELRRSRFAIVEACCQSAERRRKADGTRAALKRWLDTTVEIRNERWEWASRMLQRRTRGILVRIRCARQHEAEERALWEAGRRLHKQFRYLDTQ 533
            MKAAAKRAKRARD RARDTDCSSVTSTSTLDDSHHRLQHHPL+PSTTIKHIKYDAG YEGFEEEK+RDQLNPEQTANG DFTGIQ                                                              +GIRSLRAGDESS+LREEEDPIPAHE+DEDEMATRRDLSVPTSLEAPTIDLTSSTAKRNAAEPLHK+GQLVVFRAALADSLPDHLAG+DEEEACEDHE+ MSVRRRGSRPRELYGEV+SVPMARHGEWGHARRRTQGHRLLVRVRVLGRASGGYSEPFVEEWQRRKHQREGPREPVKITGGSGADPLAREVGAAK+KDV REGVRRTCVLPEKELPLINPPPLPTNTSIAPTPATAKAGT FK+TRSGVGA GRSRSLESG VGGV  DDR GQALVVLVPEEELF VEVKREELRRSR AIVEAC QSAERRRKAD TRAALKRWLDTTVEIRNERWEWASRMLQRRTRGILVRIRCARQ EAEERALWEAGRRLHKQFRYLDTQ
Sbjct:    1 MKAAAKRAKRARDLRARDTDCSSVTSTSTLDDSHHRLQHHPLKPSTTIKHIKYDAGGYEGFEEEKKRDQLNPEQTANGADFTGIQ--------------------------------------------------------------DGIRSLRAGDESSVLREEEDPIPAHEVDEDEMATRRDLSVPTSLEAPTIDLTSSTAKRNAAEPLHKKGQLVVFRAALADSLPDHLAGNDEEEACEDHENGMSVRRRGSRPRELYGEVMSVPMARHGEWGHARRRTQGHRLLVRVRVLGRASGGYSEPFVEEWQRRKHQREGPREPVKITGGSGADPLAREVGAAKAKDVCREGVRRTCVLPEKELPLINPPPLPTNTSIAPTPATAKAGTAFKETRSGVGATGRSRSLESGMVGGVESDDRGGQALVVLVPEEELFPVEVKREELRRSRCAIVEACYQSAERRRKADDTRAALKRWLDTTVEIRNERWEWASRMLQRRTRGILVRIRCARQREAEERALWEAGRRLHKQFRYLDTQ 471
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16044.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQN3_ECTSI2.000e-29583.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000315B-box-type zinc fingerPFAMPF00643zf-B_boxcoord: 93..125
e-value: 1.4E-5
score: 25.2
IPR000315B-box-type zinc fingerPROSITEPS50119ZF_BBOXcoord: 91..135
score: 10.182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:215916..223643 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16044.1mRNA_E-siliculosus-1a_M_contig8.16044.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig8 215916..223643 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig8.16044.1 ID=prot_E-siliculosus-1a_M_contig8.16044.1|Name=mRNA_E-siliculosus-1a_M_contig8.16044.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=541bp
MKAAAKRAKRARDSRARDTDCSSVTSTSTLDDSHHRLQHHPLEPSTTIKH
IKYDAGAYEGFEEEKERDQLNPEQTANGTDFTGIQVPEGAPKDLLCEECE
RRNAVGFCEDCGEALCAACLAILHIPSTGGQAHPHLAQARTKRTTSFEGI
RSLRAGDESSILREEEDPIPAHEIDEDEMATRRDLSVPTSLEAPTIDLTS
STAKRNAAEPLHKEGQLVVFRAALADSLPDHLAGDDEEEACEDHEHVMSV
RRRGSRPRELYGEVISVPMARHGEWGHARRRTQGHRLLVRVRVLGRASGG
YSEPFVEEWQRRKHQREGPREPVKITGGSGADPLAREVGAAKSKDVRREG
VRRTCVLPEKELPLINPPPLPTNTSIAPTPATAKAGTTFKKTRSGVGAAG
RSRSLESGTVGGVAGDDREGQALVVLVPEEELFAVEVKREELRRSRFAIV
EACCQSAERRRKADGTRAALKRWLDTTVEIRNERWEWASRMLQRRTRGIL
VRIRCARQHEAEERALWEAGRRLHKQFRYLDTQASFTCRT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000315Znf_B-box