prot_E-siliculosus-1a_M_contig8.16042.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16042.1
Unique Nameprot_E-siliculosus-1a_M_contig8.16042.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length84
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16042.1 vs. uniprot
Match: A0A6H5K7N9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7N9_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 8.410e-56
Identity = 80/83 (96.39%), Postives = 83/83 (100.00%), Query Frame = 0 
Query:    1 MSAVPVNQNYPGEAPPPYYQQQAAVPGQDMARCKGCGKQFVRKPGENPASAQWHRCENCNKRQTRDMLLVNATCGASSLCSIQ 83
            MSA+PVN+NYPGEAPPPYYQQQAAVPGQDMARCKGCG+QFVRKPGENPASAQWHRCENCNKRQTRDMLLVNATCGASSLCSIQ
Sbjct:    1 MSALPVNENYPGEAPPPYYQQQAAVPGQDMARCKGCGQQFVRKPGENPASAQWHRCENCNKRQTRDMLLVNATCGASSLCSIQ 83
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16042.1 vs. uniprot
Match: A0A8J5X8X5_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X8X5_DIALT)

HSP 1 Score: 51.6 bits (122), Expect = 2.670e-6
Identity = 18/27 (66.67%), Postives = 23/27 (85.19%), Query Frame = 0 
Query:   33 CKGCGKQFVRKPGENPASAQWHRCENC 59
            C+GCG+QFVR+PG  P +AQW+RCE C
Sbjct:   99 CRGCGRQFVRRPGVRPNTAQWYRCEEC 125
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K7N9_9PHAE8.410e-5696.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J5X8X5_DIALT2.670e-666.67Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:180265..183040 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16042.1mRNA_E-siliculosus-1a_M_contig8.16042.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig8 179266..183526 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig8.16042.1 ID=prot_E-siliculosus-1a_M_contig8.16042.1|Name=mRNA_E-siliculosus-1a_M_contig8.16042.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=84bp
MSAVPVNQNYPGEAPPPYYQQQAAVPGQDMARCKGCGKQFVRKPGENPAS
AQWHRCENCNKRQTRDMLLVNATCGASSLCSIQ*
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