prot_E-siliculosus-1a_M_contig79.16021.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig79.16021.1
Unique Nameprot_E-siliculosus-1a_M_contig79.16021.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length395
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig79.16021.1 vs. uniprot
Match: A0A6H5JRQ4_9PHAE (TPR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRQ4_9PHAE)

HSP 1 Score: 599 bits (1544), Expect = 3.020e-213
Identity = 374/395 (94.68%), Postives = 382/395 (96.71%), Query Frame = 0
Query:    1 MKRVFGAVSGAFRSLVPKATAPAAHHQESVRKAMESLAPPGRRLPSESKTLAMELVAAASEGDKEKELSL-KTPEEMFLAANALHQGKHIPADKETAFALWKKAAEAGHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEDVGIPQDEERALELFKAAATGGFVPAIHAAASMMEAGKGGEKEDAKAVQWLEVAMEAGDPMAYSTLATWYTAGRAGLELDHKKAFELHLQAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNLGKMLENGIGVEVDRERALKLYQAALRAEGQLEGGLATTGDDTMAALFEAKREGLLSDTKKGNIAPGGQTVEHGEDQGVRQLGESSSSSSEKASA 394
            MKRVFGAVSGAFRSLVPKATAPAAHHQESVRKAMESLAPPGRRLPSESK L MELVAAASEGDKEKELSL KTPE+MFLAANA HQGKHI ADKETAFALWKKAAEAGHP  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEDVGIPQDEERAL LFKAAATGGFVPAIHAAASMMEAGKGGEKEDAKAVQWLEVAMEAGDPMAYSTLATWYTAGRAGLE+DHKKAFELHL+AANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNLGKMLENGIGVEVDRERALKLYQAALRAEGQL+GGLAT GD TMAALFEAK+EGLLSDTKKGN+A G QT EHGEDQGV+Q+GESSSSSSEKASA
Sbjct:    1 MKRVFGAVSGAFRSLVPKATAPAAHHQESVRKAMESLAPPGRRLPSESKPLVMELVAAASEGDKEKELSLLKTPEDMFLAANAFHQGKHIRADKETAFALWKKAAEAGHPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEDVGIPQDEERALGLFKAAATGGFVPAIHAAASMMEAGKGGEKEDAKAVQWLEVAMEAGDPMAYSTLATWYTAGRAGLEVDHKKAFELHLKAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNLGKMLENGIGVEVDRERALKLYQAALRAEGQLKGGLATAGDATMAALFEAKQEGLLSDTKKGNVARGSQTDEHGEDQGVKQIGESSSSSSEKASA 395          
BLAST of mRNA_E-siliculosus-1a_M_contig79.16021.1 vs. uniprot
Match: A0A1Y1RC54_9PROT (Beta-lactamase n=1 Tax=Campylobacteraceae bacterium 4484_4 TaxID=1970775 RepID=A0A1Y1RC54_9PROT)

HSP 1 Score: 83.2 bits (204), Expect = 1.060e-14
Identity = 50/119 (42.02%), Postives = 66/119 (55.46%), Query Frame = 0
Query:  168 DEERALELFKAAATGGFVPAIHAAASMMEAGKGGEKEDAKAVQWLEVAMEAGDPMAYSTLATWYTAGRAGLELDHKKAFELHLQAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFE 286
            D E A  ++   A  G   A  + A M + G+G EK++A+A +  E A+E   P A   LA WY  G+ GLE +  KA+EL L+AA   +PRAQY  AV    G G  QN  EAA W+E
Sbjct:   17 DYEEAFSVYSELAKEGDPDAQTSLAYMYQQGQGCEKDEARARELYEKAVEKKQPYALFNLAVWYANGKGGLERNPFKAYELFLEAAVAGIPRAQYEVAVMSERGNGTPQNYSEAAYWYE 135          
BLAST of mRNA_E-siliculosus-1a_M_contig79.16021.1 vs. uniprot
Match: A0A2G2PHW2_9PROT (Beta-lactamase n=1 Tax=Sulfurimonas sp. TaxID=2022749 RepID=A0A2G2PHW2_9PROT)

HSP 1 Score: 80.9 bits (198), Expect = 6.400e-14
Identity = 52/156 (33.33%), Postives = 77/156 (49.36%), Query Frame = 0
Query:  167 QDEERALELFKAAATGGFVPAIHAAASMMEAGKGGEKEDAKAVQWLEVAMEAGDPMAYSTLATWYTAGRAGLELDHKKAFELHLQAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNLGKMLENGIGVEVDRERALKLYQ 322
            +D   A E++   A+ G   A  +   M + G+  E +  KA ++ E+  E     A   LA  Y  G  G+E D  KA +LHLQAA   +P A Y  A+    G G  QN  EAA W+E     G  ++  NLG + ++G GV+ DR+R    ++
Sbjct:   12 KDFTTAFEIYAKLASEGNADAQTSLGYMYQNGQACEIDKQKAFKYYELGAEQKQAYALFNLAILYMNGLDGVEHDQFKAHDLHLQAAEREVPPAMYEVALMLERGLGCVQNYSEAAFWYEEGAKRGHFESFNNLGVLYKDGHGVDTDRDRCFLCFK 167          
BLAST of mRNA_E-siliculosus-1a_M_contig79.16021.1 vs. uniprot
Match: UPI0014932DB4 (sel1 repeat family protein n=2 Tax=Shigella flexneri TaxID=623 RepID=UPI0014932DB4)

HSP 1 Score: 63.5 bits (153), Expect = 1.120e-8
Identity = 44/127 (34.65%), Postives = 63/127 (49.61%), Query Frame = 0
Query:  209 VQWLEVAMEAGDPMAYSTLATWYTAGRAGLELDHKKAFELHLQAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNLGKMLENGIGVEVDRERALKLYQAALRAEGQLEGGL 335
            ++WL  + E  +  A   LAT Y     G+   ++K      QAA +    AQ      YL G  + QNLP+A  WF++A A G   A   LG+M +NG GVE + E+A   +  +  AEG +E  L
Sbjct:    1 IKWLTKSAEQKNTDAIYFLATAYKGN--GIPAKNEKYLAYLQQAATLGSSNAQAEIGYLYLIGKELPQNLPDAGVWFKKAAAQGNFAAHFYLGRMYQNGDGVERNMEKAR--FHLSNAAEGGIEPAL 123          
BLAST of mRNA_E-siliculosus-1a_M_contig79.16021.1 vs. uniprot
Match: UPI000A9997F3 (SEL1-like repeat protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI000A9997F3)

HSP 1 Score: 64.3 bits (155), Expect = 4.180e-8
Identity = 44/127 (34.65%), Postives = 64/127 (50.39%), Query Frame = 0
Query:  209 VQWLEVAMEAGDPMAYSTLATWYTAGRAGLELDHKKAFELHLQAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNLGKMLENGIGVEVDRERALKLYQAALRAEGQLEGGL 335
            ++WL  + E  +  A   LAT Y     G+  +++K      QAA +    AQ      YL G  + QNLP+A  WF++A A G   A   LG+M +NG GVE + E+A   +  +  AEG +E  L
Sbjct:  110 IKWLTKSAEQKNTDAIYFLATAYKGN--GIPANNEKYLAYLQQAATLGSSNAQAEIGYLYLIGKELPQNLPDAGVWFKKAAAQGNFAAHFYLGRMYQNGDGVERNMEKAR--FHLSNAAEGGIEPAL 232          
BLAST of mRNA_E-siliculosus-1a_M_contig79.16021.1 vs. uniprot
Match: UPI001CFB3400 (DAP3-binding cell death enhancer 1-like n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFB3400)

HSP 1 Score: 64.7 bits (156), Expect = 5.810e-8
Identity = 57/171 (33.33%), Postives = 86/171 (50.29%), Query Frame = 0
Query:  168 DEERALELFKAAATGGFVPAIHAAASMMEAGKGGEKEDAKAVQWLEVAMEAGDPMAYSTLATWYTAGR-AGLELDHKKAFELHLQAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNLGKMLENGIGVEVDRERALKLY-QAA----LRAEGQLE 332
            ++  AL  F+ AA  G+  A++ A    E G+G  K+  KA  +   A EAG  +A    A +  + +   L  D  KA  L  QAA   +P AQ    V Y++     QN  +A  + + A   G   ++ +LG   ENG+GV+ + ++ALKLY QAA    L+A+  LE
Sbjct:   33 EDNTALSCFQVAADYGYCKAVYNAGVCYELGRGVVKDMIKAAAYYRCAAEAGHNLAQYRYAKYLLSPKHEKLAEDVYKAVTLLQQAAKAGLPEAQAYLGVFYMKLP--YQNDVKAVQYLQLAARSGDTSSLYHLGLCYENGLGVQQNLQKALKLYYQAASSGCLKAQEALE 201          
BLAST of mRNA_E-siliculosus-1a_M_contig79.16021.1 vs. uniprot
Match: A0A397TFK6_9GLOM (Kinase-like domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TFK6_9GLOM)

HSP 1 Score: 65.5 bits (158), Expect = 6.650e-8
Identity = 45/147 (30.61%), Postives = 77/147 (52.38%), Query Frame = 0
Query:  163 VGIPQDEERALELFKAAATGGFVPAIHAAASMMEAGKGGEKEDAKAVQWLEVAMEAGDPMAYSTLATWYTAGRAGLELDHKKAFELHLQAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNLGKMLENGIG 309
            +G  +D+  AL  +  A+  G   A +   ++     G  K+  KA Q  +++ + G     + L   Y+ G  G  +D K+AF L+L+AANMN   AQYN AV + +G GI++N  E+  W++++   G  +A   + ++L   IG
Sbjct:  343 IGTKEDKRVALHTYNQASRNGHAIASYYMGNIF----GVNKDYNKAFQCYDLSAKGGFTFGINMLGYCYSKG-IGTFVDQKEAFYLYLRAANMNNMVAQYNVAVCFDDGIGIDKNPKESKEWYKKSADNGYDKARKTMDELLGKEIG 484          
BLAST of mRNA_E-siliculosus-1a_M_contig79.16021.1 vs. uniprot
Match: UPI001493A3DE (SEL1-like repeat protein n=1 Tax=Shigella flexneri TaxID=623 RepID=UPI001493A3DE)

HSP 1 Score: 64.3 bits (155), Expect = 1.740e-7
Identity = 44/127 (34.65%), Postives = 64/127 (50.39%), Query Frame = 0
Query:  209 VQWLEVAMEAGDPMAYSTLATWYTAGRAGLELDHKKAFELHLQAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNLGKMLENGIGVEVDRERALKLYQAALRAEGQLEGGL 335
            ++WL  + E  +  A   LAT Y     G+  +++K      QAA +    AQ      YL G  + QNLP+A  WF++A A G   A   LG+M +NG GVE + E+A   +  +  AEG +E  L
Sbjct:  434 IKWLTKSAEQKNTDAIYFLATAYKGN--GIPANNEKYLAYLQQAATLGSSNAQAEIGYLYLIGKELPQNLPDAGVWFKKAAAQGNFAAHFYLGRMYQNGDGVERNMEKAR--FHLSNAAEGGIEPAL 556          
BLAST of mRNA_E-siliculosus-1a_M_contig79.16021.1 vs. uniprot
Match: A0A658XXT5_SHIFL (Beta-lactamase hcpC n=136 Tax=Enterobacterales TaxID=91347 RepID=A0A658XXT5_SHIFL)

HSP 1 Score: 64.3 bits (155), Expect = 1.980e-7
Identity = 44/127 (34.65%), Postives = 64/127 (50.39%), Query Frame = 0
Query:  209 VQWLEVAMEAGDPMAYSTLATWYTAGRAGLELDHKKAFELHLQAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNLGKMLENGIGVEVDRERALKLYQAALRAEGQLEGGL 335
            ++WL  + E  +  A   LAT Y     G+  +++K      QAA +    AQ      YL G  + QNLP+A  WF++A A G   A   LG+M +NG GVE + E+A   +  +  AEG +E  L
Sbjct:  584 IKWLTKSAEQKNTDAIYFLATAYKGN--GIPTNNEKYLAYLQQAATLGSSNAQAEIGYLYLIGKELPQNLPDAGVWFKKAAAQGNFAAHFYLGRMYQNGDGVERNMEKAR--FHLSNAAEGGIEPAL 706          
BLAST of mRNA_E-siliculosus-1a_M_contig79.16021.1 vs. uniprot
Match: UPI0015FAACE3 (SEL1-like repeat protein n=2 Tax=Escherichia coli TaxID=562 RepID=UPI0015FAACE3)

HSP 1 Score: 61.6 bits (148), Expect = 3.300e-7
Identity = 43/127 (33.86%), Postives = 63/127 (49.61%), Query Frame = 0
Query:  209 VQWLEVAMEAGDPMAYSTLATWYTAGRAGLELDHKKAFELHLQAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNLGKMLENGIGVEVDRERALKLYQAALRAEGQLEGGL 335
            ++WL  + E  +  A   LAT Y     G+  +++K      QAA +    AQ      YL G  + QNLP+A  WF++A A     A   LG+M +NG GVE + E+A   +  +  AEG +E  L
Sbjct:  107 IKWLTKSAEQKNTDAIYFLATAYKGN--GIPANNEKYLAYLQQAATLGSSNAQAEIGYLYLIGKELPQNLPDAGVWFKKAAAQDNFAAHFYLGRMYQNGDGVERNMEKAR--FHLSNAAEGGIEPAL 229          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig79.16021.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5JRQ4_9PHAE3.020e-21394.68TPR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A1Y1RC54_9PROT1.060e-1442.02Beta-lactamase n=1 Tax=Campylobacteraceae bacteriu... [more]
A0A2G2PHW2_9PROT6.400e-1433.33Beta-lactamase n=1 Tax=Sulfurimonas sp. TaxID=2022... [more]
UPI0014932DB41.120e-834.65sel1 repeat family protein n=2 Tax=Shigella flexne... [more]
UPI000A9997F34.180e-834.65SEL1-like repeat protein n=1 Tax=Escherichia coli ... [more]
UPI001CFB34005.810e-833.33DAP3-binding cell death enhancer 1-like n=1 Tax=Pr... [more]
A0A397TFK6_9GLOM6.650e-830.61Kinase-like domain-containing protein n=1 Tax=Glom... [more]
UPI001493A3DE1.740e-734.65SEL1-like repeat protein n=1 Tax=Shigella flexneri... [more]
A0A658XXT5_SHIFL1.980e-734.65Beta-lactamase hcpC n=136 Tax=Enterobacterales Tax... [more]
UPI0015FAACE33.300e-733.86SEL1-like repeat protein n=2 Tax=Escherichia coli ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 221..257
e-value: 0.011
score: 25.0
coord: 258..293
e-value: 5.5E-7
score: 39.2
coord: 294..329
e-value: 5.7E-6
score: 35.8
coord: 185..220
e-value: 0.29
score: 20.2
coord: 109..144
e-value: 0.0015
score: 27.8
coord: 73..108
e-value: 0.0055
score: 25.9
coord: 145..184
e-value: 0.38
score: 19.8
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 146..183
e-value: 0.0012
score: 19.4
coord: 109..143
e-value: 0.036
score: 14.8
coord: 258..292
e-value: 1.8E-6
score: 28.5
coord: 189..220
e-value: 2.9
score: 8.7
coord: 80..108
e-value: 0.0061
score: 17.2
coord: 294..325
e-value: 9.8E-6
score: 26.1
coord: 227..256
e-value: 0.24
score: 12.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 233..331
e-value: 2.1E-24
score: 87.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 45..232
e-value: 6.4E-38
score: 132.3
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 51..330
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..394
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 68..181
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 164..326

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig79contigE-siliculosus-1a_M_contig79:687589..691673 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig79.16021.1mRNA_E-siliculosus-1a_M_contig79.16021.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig79 687200..691716 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig79.16021.1 ID=prot_E-siliculosus-1a_M_contig79.16021.1|Name=mRNA_E-siliculosus-1a_M_contig79.16021.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=395bp
MKRVFGAVSGAFRSLVPKATAPAAHHQESVRKAMESLAPPGRRLPSESKT
LAMELVAAASEGDKEKELSLKTPEEMFLAANALHQGKHIPADKETAFALW
KKAAEAGHPKAMYSYAGCLRNGDGTKKDLPTAVSLFERLGDQGLLEAKHA
LGLVLSSGEGEDVGIPQDEERALELFKAAATGGFVPAIHAAASMMEAGKG
GEKEDAKAVQWLEVAMEAGDPMAYSTLATWYTAGRAGLELDHKKAFELHL
QAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNL
GKMLENGIGVEVDRERALKLYQAALRAEGQLEGGLATTGDDTMAALFEAK
REGLLSDTKKGNIAPGGQTVEHGEDQGVRQLGESSSSSSEKASA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR006597Sel1-like