prot_E-siliculosus-1a_M_contig79.16019.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig79.16019.1
Unique Nameprot_E-siliculosus-1a_M_contig79.16019.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length152
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig79.16019.1 vs. uniprot
Match: A0A6H5KRJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRJ5_9PHAE)

HSP 1 Score: 238 bits (608), Expect = 5.510e-72
Identity = 120/140 (85.71%), Postives = 128/140 (91.43%), Query Frame = 0 
Query:   14 AQQRGPVEFSKFLGDRGVDAPVNCNHLAFAGDPATWTRPILLKQGMCLQYQKRAFYNDDPTTTTGKASAAASKVSSFQGGPAGHANRLGASCVKVEADRAGSSAT--PHCAALSQLRPEVRQVAGVVERSFARSFLHHFT 151
            A+ +GPV  SKFLG+RGVD PVN NH AFAGDPA WTRPILLKQGMCLQYQKRAFY++ PTTTTGKASAAASKVSSFQGGPAGH NRLGASCVKVEADRAGSSA+  PHCAALSQLRPE+R+VAGVVERSFARSFL HFT
Sbjct:  158 AELQGPVRLSKFLGERGVDVPVNLNHPAFAGDPAAWTRPILLKQGMCLQYQKRAFYHESPTTTTGKASAAASKVSSFQGGPAGHGNRLGASCVKVEADRAGSSASAIPHCAALSQLRPELRKVAGVVERSFARSFLRHFT 297
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig79.16019.1 vs. uniprot
Match: A0A6H5K8J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8J1_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 3.730e-9
Identity = 30/47 (63.83%), Postives = 36/47 (76.60%), Query Frame = 0 
Query:   12 SRAQQRGPVEFSKFLGDRGVDAPVNCNHLAFAGDPATWTRPILLKQG 58
            + A+ +GPVE SKF+GDRGV APV  +  AFAGDPA WT PILL+ G
Sbjct:  223 AEAELQGPVELSKFVGDRGVHAPVVHDLPAFAGDPAAWTAPILLEAG 269
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig79.16019.1 vs. uniprot
Match: A0A6H5JH26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH26_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 1.040e-7
Identity = 29/47 (61.70%), Postives = 35/47 (74.47%), Query Frame = 0 
Query:   12 SRAQQRGPVEFSKFLGDRGVDAPVNCNHLAFAGDPATWTRPILLKQG 58
            + A+ +G VE SKF+GDRGVDAPV  +  AFAGDPA WT PI L+ G
Sbjct:   75 AEAELQGLVELSKFVGDRGVDAPVVHDIPAFAGDPAAWTAPIPLEAG 121
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig79.16019.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KRJ5_9PHAE5.510e-7285.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8J1_9PHAE3.730e-963.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JH26_9PHAE1.040e-761.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig79contigE-siliculosus-1a_M_contig79:674640..675654 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig79.16019.1mRNA_E-siliculosus-1a_M_contig79.16019.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig79 674640..675654 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig79.16019.1 ID=prot_E-siliculosus-1a_M_contig79.16019.1|Name=mRNA_E-siliculosus-1a_M_contig79.16019.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=152bp
PLACPGRCHGVSRAQQRGPVEFSKFLGDRGVDAPVNCNHLAFAGDPATWT
RPILLKQGMCLQYQKRAFYNDDPTTTTGKASAAASKVSSFQGGPAGHANR
LGASCVKVEADRAGSSATPHCAALSQLRPEVRQVAGVVERSFARSFLHHF
TE
back to top