prot_E-siliculosus-1a_M_contig79.15955.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig79.15955.1
Unique Nameprot_E-siliculosus-1a_M_contig79.15955.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length463
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig79.15955.1 vs. uniprot
Match: D7FZ55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ55_ECTSI)

HSP 1 Score: 666 bits (1718), Expect = 2.050e-237
Identity = 379/468 (80.98%), Postives = 393/468 (83.97%), Query Frame = 0
Query:    1 MSQAVKRISPIAGAAAGGLVAGAAGIWAWRSKRDNADKDDAPTAPAXXXSP----PLQRTGPMVAVYLDDSSIEKLQMEYPGTKPGRLRKVVIEYDPSDEQRGLYEPRFGGSATVKLTGEASSDNRLALVASVSSAGTSVEPPSLPCAVDVTPGDVGGGPLGSTVLIEQIKRVGALAEDSWNGLLPALSAHERDFPSEEGSYNKLDEPLTLTGSICRADWVEGMTGVCRTTTAGGGKREDGWTPQPCTICNTLDSSPCRDIYKKFDALTTRIIELQPPSETSSDGSKSPGTSSGSSSAKDDERGLAEAPGGGDGDGKQAGATEIVAGSDRGAGQSGADVASEGSAGTAVXXXXXXXLSGRQGGHS--RKVEGGEKESEEGVSGEPETEEERLRREELELLEDKRMGVMVEMLTCSRFYHVLEDSNADDGLVPDMSGDDEEGGEGDAAPGGSSASESDGAGKVEEGEAK 462
            MSQAVKRISP AG AAGGLVAGAAG+WAWRSKRDNA K DA TAP XXX      PLQRTGPMVAVYLDDSSIEKLQMEYPGTKPGRLRKVVIEYDPSDEQRGLYEPRFGGSATVK+TGEA SDNRLALVASVSSAGTSVEPPSL CAVDVTPGDVGGGPLGSTVLIEQIKRVGALAEDSW GLLP LSAHERDFPSEEGSYNKLDEPLTLTGSICRADWVE MTGVCRTTTAGGGKREDGWTPQ C+ICNTL+SSPCRDI+KKFDA++TRI ELQP SETSSDGSK PG                          KQ  ATE+VAGSDRGAG+SG D+ASEGSAG AV       LSGR GGHS  RK E GEKES  G SGEPETEEERLRREELE+LEDKRM VMVEM  CS+F+HVLEDS ADDGLVP M GDDEEG EGDAAPGG+SASES GA KVEEGEAK
Sbjct:    1 MSQAVKRISPFAGVAAGGLVAGAAGLWAWRSKRDNAVKGDATTAPXXXXXXXXXXPLQRTGPMVAVYLDDSSIEKLQMEYPGTKPGRLRKVVIEYDPSDEQRGLYEPRFGGSATVKVTGEACSDNRLALVASVSSAGTSVEPPSLSCAVDVTPGDVGGGPLGSTVLIEQIKRVGALAEDSWKGLLPPLSAHERDFPSEEGSYNKLDEPLTLTGSICRADWVEPMTGVCRTTTAGGGKREDGWTPQACSICNTLESSPCRDIHKKFDAVSTRIYELQPTSETSSDGSKPPGXXXXXXXXXXXXXXXXXXXXXXXXXXKQTEATEVVAGSDRGAGRSGTDIASEGSAGPAVGGGDENALSGRHGGHSPSRKGEVGEKESVAGGSGEPETEEERLRREELEVLEDKRMVVMVEMFRCSKFHHVLEDSYADDGLVPGMLGDDEEGEEGDAAPGGASASESGGAVKVEEGEAK 468          
BLAST of mRNA_E-siliculosus-1a_M_contig79.15955.1 vs. uniprot
Match: A0A6H5JUT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUT1_9PHAE)

HSP 1 Score: 650 bits (1677), Expect = 2.840e-231
Identity = 363/462 (78.57%), Postives = 380/462 (82.25%), Query Frame = 0
Query:    1 MSQAVKRISPIAGAAAGGLVAGAAGIWAWRSKRDNADKDDAPTAPAXXXSPPLQRTGPMVAVYLDDSSIEKLQMEYPGTKPGRLRKVVIEYDPSDEQRGLYEPRFGGSATVKLTGEASSDNRLALVASVSSAGTSVEPPSLPCAVDVTPGDVGGGPLGSTVLIEQIKRVGALAEDSWNGLLPALSAHERDFPSEEGSYNKLDEPLTLTGSICRADWVEGMTGVCRTTTAGGGKREDGWTPQPCTICNTLDSSPCRDIYKKFDALTTRIIELQPPSETSSDGSKSPGTSSGSSSAKDDERGLAEAPGGGDGDGKQAGATEIVAGSDRGAGQSGADVASEGSAGTAVXXXXXXXLSGRQGGHSRKVEGGEKESEEGVSGEPETEEERLRREELELLEDKRMGVMVEMLTCSRFYHVLEDSNADDGLVPDMSGDDEEGGEGDAAPGGSSASESDGAGKVEEGEAK 462
            MSQAVKRISPIAG AAGGLVAGAAG+WAWRS RDN D DDA TAPA   SPPLQRTGPMVAVYLDDSSIEKLQM+YPGT PGRLRKVVIEYDPSDEQRGLYEPRFG SATVKLTGEASS+NR+ALVASVSSAGTSVEPPSL CAVDVTPG+VGGGPLGSTVLIEQIKRVGA+AEDSW GLLPALSAHERDF SEEGSYNKLDEPLTLTGSICRADWVEGMTGVCRTTTAGGGKREDGWTPQPCTICN+L+SSPCRDIYK+FDAL TRI ELQPPSETSSDGSKSPGTS G                                           DVA EGSAGTAV       LSGRQGGHSRK EGGEKESEE         EERLRREELE+LE+KR  VMV+ML CS+F+HVLEDSNADDGLVPDMSGDDEEGGEGDAAPGG+SAS+S GA KV+EGEAK
Sbjct:    1 MSQAVKRISPIAGVAAGGLVAGAAGLWAWRSMRDNEDIDDATTAPAPAPSPPLQRTGPMVAVYLDDSSIEKLQMKYPGTNPGRLRKVVIEYDPSDEQRGLYEPRFGDSATVKLTGEASSENRVALVASVSSAGTSVEPPSLSCAVDVTPGEVGGGPLGSTVLIEQIKRVGAVAEDSWKGLLPALSAHERDFLSEEGSYNKLDEPLTLTGSICRADWVEGMTGVCRTTTAGGGKREDGWTPQPCTICNSLESSPCRDIYKEFDALNTRINELQPPSETSSDGSKSPGTSPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVAFEGSAGTAVGGGDENALSGRQGGHSRKGEGGEKESEEXXXXXXXXXEERLRREELEVLEEKRTDVMVKMLKCSQFHHVLEDSNADDGLVPDMSGDDEEGGEGDAAPGGASASQSGGAVKVDEGEAK 462          
BLAST of mRNA_E-siliculosus-1a_M_contig79.15955.1 vs. uniprot
Match: D8LQJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQJ5_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 7.010e-47
Identity = 91/190 (47.89%), Postives = 116/190 (61.05%), Query Frame = 0
Query:  100 LYEPRFGGSATVKLTGEASSDNRLALVASVSSAGTSVEPPSLPCAVDVTPGDV------------GGGPLGSTVLIEQIKRVGALAEDSWNGLLPALSAHERDFPSEEGSYNKLDEPLTLTGSICRADWVEGMTGVCRTTTAGGGKREDGWTPQPCTICNTLDSSPCRDIYKKFDALTTRIIELQPPSET 277
            +Y   F G A V +TG+ASS  R ALVASVS AG  VEP SL   +D++P  +            G GPL S VLIEQ K+ GA  E+ W G LP + AH+R FPSE G+Y +L EP+T+ G+ICRADWV+G + VCR T  GG KRE+ W P  C+IC     SPC+ I+++F A + R  E     ET
Sbjct:    1 MYRHLFSGKAEVTVTGDASSFARRALVASVSHAGKIVEPASLSATIDISPPAITDPEASAVAENDGPGPLASAVLIEQAKKAGATKEEMWEGTLPPMLAHDRRFPSEPGAYVRLKEPITVYGTICRADWVDGASNVCRDTLEGGQKREEDWEPSDCSICAFFSVSPCKGIFERFVATSKRRDEYLKTYET 190          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig79.15955.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FZ55_ECTSI2.050e-23780.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUT1_9PHAE2.840e-23178.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQJ5_ECTSI7.010e-4747.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..462
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..28
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig79contigE-siliculosus-1a_M_contig79:88789..92307 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig79.15955.1mRNA_E-siliculosus-1a_M_contig79.15955.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig79 88749..93299 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig79.15955.1 ID=prot_E-siliculosus-1a_M_contig79.15955.1|Name=mRNA_E-siliculosus-1a_M_contig79.15955.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=463bp
MSQAVKRISPIAGAAAGGLVAGAAGIWAWRSKRDNADKDDAPTAPAPAPS
PPLQRTGPMVAVYLDDSSIEKLQMEYPGTKPGRLRKVVIEYDPSDEQRGL
YEPRFGGSATVKLTGEASSDNRLALVASVSSAGTSVEPPSLPCAVDVTPG
DVGGGPLGSTVLIEQIKRVGALAEDSWNGLLPALSAHERDFPSEEGSYNK
LDEPLTLTGSICRADWVEGMTGVCRTTTAGGGKREDGWTPQPCTICNTLD
SSPCRDIYKKFDALTTRIIELQPPSETSSDGSKSPGTSSGSSSAKDDERG
LAEAPGGGDGDGKQAGATEIVAGSDRGAGQSGADVASEGSAGTAVGGGDE
NALSGRQGGHSRKVEGGEKESEEGVSGEPETEEERLRREELELLEDKRMG
VMVEMLTCSRFYHVLEDSNADDGLVPDMSGDDEEGGEGDAAPGGSSASES
DGAGKVEEGEAK*
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