prot_E-siliculosus-1a_M_contig780.15936.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig780.15936.1
Unique Nameprot_E-siliculosus-1a_M_contig780.15936.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length431
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig780.15936.1 vs. uniprot
Match: D8LEC0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC0_ECTSI)

HSP 1 Score: 437 bits (1125), Expect = 9.810e-149
Identity = 316/368 (85.87%), Postives = 327/368 (88.86%), Query Frame = 0
Query:   12 MFSRAKVLLPGYRRAAKEMAERQQLELEFAAYKWKMAVGGVAXXXXXXXXXXGMVILLRWWSKHQADRESALVQTVEESRAETATANEKTTRFEAQRDTARSACYEFQLAVVETRADSHTAGAESARVKTQLQTKTKLLKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVARFNVQTEASALQRLGMLSLNAALMKEEGKTEKAERDLVTCRAKYEECRSSLQLAREQMARDSAQGEAVEEAARTAATRGNETRPQAQQQQVPHGSHASTASDAELDEEGFGLKHMKEAMLRSLEEESKQDGGRDPQQGKVSSAPWAKATAAPGKRXXXXXXXXXXXTASTNRWAVFAED 379
            MFSRAKVLLPGYRRAAKE+AERQQLELEFAAYKWKMAVGGVA           MVILLRWW KHQADRESALV TVEESRAETATANEKTTRFEAQRDTARSACYEFQLAVVE RADSH A AESARVKTQLQT+TKLLK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   FNVQT+   LQRLGM SLNAALMKEEGKTEKAERD+ TCRAKYEECRSSLQ AREQMARDSAQ EAV+EAAR AAT+G ET PQAQ+QQV  GSHASTASDA+LDEEGFGL+HM++AMLRSLEEE KQDG  DPQQGKVSSAP AKA AAP  RXXXXXXXXX  TASTNRWAVFAED
Sbjct:    1 MFSRAKVLLPGYRRAAKELAERQQLELEFAAYKWKMAVGGVAFTVLILILVLSMVILLRWWGKHQADRESALVHTVEESRAETATANEKTTRFEAQRDTARSACYEFQLAVVENRADSHRASAESARVKTQLQTRTKLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNVQTQ---LQRLGMRSLNAALMKEEGKTEKAERDMATCRAKYEECRSSLQSAREQMARDSAQAEAVKEAARKAATQGKETGPQAQKQQVAQGSHASTASDAKLDEEGFGLQHMEQAMLRSLEEEVKQDGVCDPQQGKVSSAPRAKAIAAPA-RXXXXXXXXXLPTASTNRWAVFAED 364          
BLAST of mRNA_E-siliculosus-1a_M_contig780.15936.1 vs. uniprot
Match: D8LEC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC9_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 4.410e-46
Identity = 113/245 (46.12%), Postives = 121/245 (49.39%), Query Frame = 0
Query:    1 QSPSVGNKIAGMFSRAKVLLPGYRRAAKEMAERQQLELEFAAYKWKMAVGGVAXXXXXXXXXXGMVILLRWWSKHQADRESALVQTVEESRAETATANEKTTRFEAQRDTARSACYEFQLAVVETRADSHTAGAESARVKTQLQTKTKLLKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVARFNVQTEASALQRLGMLSLNAALMKEEGKTEKAERDLVTCRAKYE 245
            +S +VG+KIAGMFSRAKVLLPGYRRAAKE+AERQQL LEFAAYKWKMAVGGVA           MVILLRWW K QADRESALV TVEESRAETATANEKT   EAQRD                                                                                                     LQRLGML LN A++KEE KT+KAERDL TCRAKY+
Sbjct:    3 RSANVGSKIAGMFSRAKVLLPGYRRAAKELAERQQLGLEFAAYKWKMAVGGVAFTVLILILVLSMVILLRWWGKRQADRESALVHTVEESRAETATANEKTMLIEAQRD-----------------------------------------------------------------------------------------------------LQRLGMLFLNGAIIKEEEKTKKAERDLATCRAKYD 146          
BLAST of mRNA_E-siliculosus-1a_M_contig780.15936.1 vs. uniprot
Match: A0A6H5KTB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTB2_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 6.150e-27
Identity = 117/144 (81.25%), Postives = 123/144 (85.42%), Query Frame = 0
Query:  110 TARSACYEFQLAVVETRADSHTAGAESARVKTQLQTKTKLLKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVARFNVQTEASALQRLGMLSLNAALMKEEGKTEKAERDLVTCRAKYEECRSSLQL 253
            TARSACYEFQLAVVE RADSH AGA+ ARVKT L TKTKL +R     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   FNVQT+ASA QRL ML LNAAL+KEEGKTEKAERDL TCRAKYE  R++L L
Sbjct:   22 TARSACYEFQLAVVENRADSHKAGADLARVKTDLPTKTKLFRRTEAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNVQTQASAPQRLRMLCLNAALVKEEGKTEKAERDLATCRAKYE--RATLTL 163          
BLAST of mRNA_E-siliculosus-1a_M_contig780.15936.1 vs. uniprot
Match: A0A6H5K864_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K864_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 4.310e-25
Identity = 60/75 (80.00%), Postives = 68/75 (90.67%), Query Frame = 0
Query:  267 AVEEAARTAATRGNETRPQAQQQQVPHGSHASTASDAELDEEGFGLKHMKEAMLRSLEEESKQDGGRDPQQGKVS 341
            AVEEAAR  AT+G ET PQAQQQQ+P GSHASTASDA+L +EGFGL+HM+EAMLRS+EE SKQDGGR+PQQGKVS
Sbjct:   36 AVEEAARKGATQGKETGPQAQQQQLPQGSHASTASDAKLGKEGFGLRHMEEAMLRSMEE-SKQDGGRNPQQGKVS 109          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig780.15936.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LEC0_ECTSI9.810e-14985.87Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D8LEC9_ECTSI4.410e-4646.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTB2_9PHAE6.150e-2781.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K864_9PHAE4.310e-2580.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 185..205
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..46
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..430
NoneNo IPR availableTMHMMTMhelixcoord: 50..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig780contigE-siliculosus-1a_M_contig780:1809..4783 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig780.15936.1mRNA_E-siliculosus-1a_M_contig780.15936.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig780 1809..4783 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig780.15936.1 ID=prot_E-siliculosus-1a_M_contig780.15936.1|Name=mRNA_E-siliculosus-1a_M_contig780.15936.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=431bp
QSPSVGNKIAGMFSRAKVLLPGYRRAAKEMAERQQLELEFAAYKWKMAVG
GVAVAILILVLALGMVILLRWWSKHQADRESALVQTVEESRAETATANEK
TTRFEAQRDTARSACYEFQLAVVETRADSHTAGAESARVKTQLQTKTKLL
KRTEADKQTARSACYEYHLEGIQNRQDAYRASIALAQAEHDLQKMTQVVA
RFNVQTEASALQRLGMLSLNAALMKEEGKTEKAERDLVTCRAKYEECRSS
LQLAREQMARDSAQGEAVEEAARTAATRGNETRPQAQQQQVPHGSHASTA
SDAELDEEGFGLKHMKEAMLRSLEEESKQDGGRDPQQGKVSSAPWAKATA
APGKRRRREKKEEPPPTASTNRWAVFAEDEDDDDDAEGKGAEGATPADAT
PATSPHGRGRTRGKSPSPSRRRANNERQDS*
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