prot_E-siliculosus-1a_M_contig78.15933.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig78.15933.1
Unique Nameprot_E-siliculosus-1a_M_contig78.15933.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length190
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig78.15933.1 vs. uniprot
Match: D7FUE3_ECTSI (UPF0250 protein NE1487 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUE3_ECTSI)

HSP 1 Score: 330 bits (846), Expect = 7.850e-114
Identity = 173/180 (96.11%), Postives = 176/180 (97.78%), Query Frame = 0
Query:   10 MVLRLATRSFGFSPASSGGIAAQVSSRRAAARSHGRHTRPSAAAFSSRPSPAAARPTGSRPPATARKMVLRPDWEREGRVHGLRMPRERTAERAFEYLVDYPCEFEIKVIGINEGSFADDIAATVSAVCEVETSDVRFTVRDTTSGRYQSITVHAPVKNANMLYKCYELIDEDPRVKFKF 189
            MVLRLATRSFGFSPASSGGIAAQVSSRRAAARSHGRHTRP+AAAF+S PS AAARPTGSRPP TARKMVLRPDWEREGRV+GLRMPRERTAERAFEYLVDYPCEFEIKVIGINEGSFADDIAATVSAVCEVETSDVRFTVRDTTSGRYQSITVHAPVKNA MLYKCYELIDEDPRVKFKF
Sbjct:    1 MVLRLATRSFGFSPASSGGIAAQVSSRRAAARSHGRHTRPTAAAFTSGPSAAAARPTGSRPPTTARKMVLRPDWEREGRVYGLRMPRERTAERAFEYLVDYPCEFEIKVIGINEGSFADDIAATVSAVCEVETSDVRFTVRDTTSGRYQSITVHAPVKNATMLYKCYELIDEDPRVKFKF 180          
BLAST of mRNA_E-siliculosus-1a_M_contig78.15933.1 vs. uniprot
Match: A0A836CJU5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJU5_9STRA)

HSP 1 Score: 137 bits (344), Expect = 6.000e-38
Identity = 67/116 (57.76%), Postives = 87/116 (75.00%), Query Frame = 0
Query:   74 ARKMVLRPDWEREGRVHGLRMPRERTAERAFEYLVDYPCEFEIKVIGINEGSFADDIAATVSAVCEVETSDVRFTVRDTTSGRYQSITVHAPVKNANMLYKCYELIDEDPRVKFKF 189
            A  M+LR D +REGR  G          RAFEYLVDYPC+F+IK +G N+G+ ADD+AA V +VCEVE + V +TVRDT SG+Y+S+T+ APV N++MLYKCYE+I +D RV+FKF
Sbjct:   42 ALSMILRTDADREGRKMG--------NPRAFEYLVDYPCKFQIKAVGHNKGNLADDLAALVGSVCEVEPAAVEYTVRDTDSGKYRSVTLMAPVSNSDMLYKCYEVIGQDERVRFKF 149          
BLAST of mRNA_E-siliculosus-1a_M_contig78.15933.1 vs. uniprot
Match: A0A836C812_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C812_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.600e-34
Identity = 66/118 (55.93%), Postives = 80/118 (67.80%), Query Frame = 0
Query:   72 ATARKMVLRPDWEREGRVHGLRMPRERTAERAFEYLVDYPCEFEIKVIGINEGSFADDIAATVSAVCEVETSDVRFTVRDTTSGRYQSITVHAPVKNANMLYKCYELIDEDPRVKFKF 189
            A AR M LR D +REGR  G          R FEYLV+YPCEF+IKV+G N+ S ADD+AA V+A CEVE   V +T R+T SG+Y S+T+ APV +  MLY+CY  I ED RVKFKF
Sbjct:   41 AAARGMALRSDDDREGRKLG--------NPRVFEYLVEYPCEFQIKVVGFNDASLADDLAAIVAATCEVEVGAVTYTTRETESGKYSSVTLTAPVASPAMLYECYAKIGEDARVKFKF 150          
BLAST of mRNA_E-siliculosus-1a_M_contig78.15933.1 vs. uniprot
Match: A0A6U5NVB4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A6U5NVB4_9STRA)

HSP 1 Score: 104 bits (259), Expect = 3.390e-25
Identity = 50/95 (52.63%), Postives = 68/95 (71.58%), Query Frame = 0
Query:   97 ERTAE--RAFEYLVDYPCEFEIKVIGINEGSFADDIAATVSAVCEVETSDVRFTVRDTTSGRYQSITVHAPVKNANMLYKCYELIDEDPRVKFKF 189
            E T E  R F+ LV+YPC+F +K++G NEG+FA ++ + V+ VCE E  DV +T R    G++ S+TV APV+NA MLY  YE +D+DPRVKFKF
Sbjct:   53 EETGEKSRVFDALVEYPCKFTMKIVGANEGNFAQEMVSLVADVCEKEMEDVAYTTR--AMGKWTSVTVKAPVENAEMLYAIYEAVDKDPRVKFKF 145          
BLAST of mRNA_E-siliculosus-1a_M_contig78.15933.1 vs. uniprot
Match: A0A7S1Z075_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z075_9STRA)

HSP 1 Score: 104 bits (259), Expect = 4.480e-24
Identity = 54/113 (47.79%), Postives = 77/113 (68.14%), Query Frame = 0
Query:   78 VLRPDWEREG-RVHGLRMPRERTAERAFEYLVDYPCEFEIKVIGINEGSFADDIAATVSAVCEVETSDVRFTVRDTTSGRYQSITVHAPVKNANMLYKCYELIDEDPRVKFKF 189
            V  P+++ +G  +H   +  E+  +R FE LVDYPC+F +K++G NEG+F  +I   V+  CEV   DV ++ RD  +G++ S+TVHAPVK+A MLY  YE +D DPRVKFKF
Sbjct:  142 VNNPEYDDQGYTLHTNEVTGEK--KRVFEALVDYPCDFTMKIVGRNEGAFVLEIVQVVADSCEVGIEDVPYSKRD--NGKWTSVTVHAPVKDAEMLYTLYENVDRDPRVKFKF 250          
BLAST of mRNA_E-siliculosus-1a_M_contig78.15933.1 vs. uniprot
Match: A0A7S2SR06_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR06_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.470e-23
Identity = 45/86 (52.33%), Postives = 64/86 (74.42%), Query Frame = 0
Query:  104 FEYLVDYPCEFEIKVIGINEGSFADDIAATVSAVCEVETSDVRFTVRDTTSGRYQSITVHAPVKNANMLYKCYELIDEDPRVKFKF 189
            FE ++DYPCEFEIKVIG  EG FA D+ A +S V  V   D+ F+ R+T + ++ S+++ A V+ ++MLY+CYE +D+DPRVKFKF
Sbjct:   85 FERMLDYPCEFEIKVIGRLEGEFARDMVAIISTVTGVPAMDIAFSTRETPNNKFTSVSIKATVQTSDMLYQCYEELDKDPRVKFKF 170          
BLAST of mRNA_E-siliculosus-1a_M_contig78.15933.1 vs. uniprot
Match: B5Y5R9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y5R9_PHATC)

HSP 1 Score: 101 bits (252), Expect = 4.330e-23
Identity = 49/95 (51.58%), Postives = 68/95 (71.58%), Query Frame = 0
Query:   97 ERTAE--RAFEYLVDYPCEFEIKVIGINEGSFADDIAATVSAVCEVETSDVRFTVRDTTSGRYQSITVHAPVKNANMLYKCYELIDEDPRVKFKF 189
            ERT E  R FE LVDYPC+F +K++G NEG+F +++ A V+  C V+   ++ +VR    G++ S+TV APV++A MLY  YE+ID DPRVKFKF
Sbjct:  153 ERTGEKSRVFEALVDYPCDFTMKIVGANEGAFVEEMVAVVAESCLVQADSIQHSVR--ALGKWTSVTVQAPVQSAEMLYGLYEVIDRDPRVKFKF 245          
BLAST of mRNA_E-siliculosus-1a_M_contig78.15933.1 vs. uniprot
Match: A0A6T7ELE2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7ELE2_9STRA)

HSP 1 Score: 100 bits (248), Expect = 3.370e-22
Identity = 51/94 (54.26%), Postives = 66/94 (70.21%), Query Frame = 0
Query:   97 ERTAE--RAFEYLVDYPCEFEIKVIGINEGSFADDIAATVSAVCEVETSDVRFTVRDTTSGRYQSITVHAPVKNANMLYKCYELIDEDPRVKFK 188
            ERT E  R FE LV YPCEF +K++G NEG+F  +I   V+  CEV+T ++ F+ R   +G++ SITV APVK+A MLY  YE ID DPRVK+K
Sbjct:  189 ERTGEKKRVFEALVQYPCEFTMKIVGANEGAFTAEIVNVVAESCEVDTQEIVFSERH--NGKWTSITVKAPVKSAEMLYLIYENIDRDPRVKYK 280          
BLAST of mRNA_E-siliculosus-1a_M_contig78.15933.1 vs. uniprot
Match: A0A1Z5K932_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K932_FISSO)

HSP 1 Score: 99.0 bits (245), Expect = 5.550e-22
Identity = 46/88 (52.27%), Postives = 62/88 (70.45%), Query Frame = 0
Query:  102 RAFEYLVDYPCEFEIKVIGINEGSFADDIAATVSAVCEVETSDVRFTVRDTTSGRYQSITVHAPVKNANMLYKCYELIDEDPRVKFKF 189
            R FE LV+YPCEF +K++G NEG F +++ A V+  CEV   DV  +VR    G++ S+TV APV++A MLY  YE +D DPRV+FKF
Sbjct:  169 RVFEALVEYPCEFTLKIVGANEGLFVEEMVAVVAEACEVTVQDVSHSVRMV--GKWTSVTVKAPVQSAAMLYALYETVDRDPRVRFKF 254          
BLAST of mRNA_E-siliculosus-1a_M_contig78.15933.1 vs. uniprot
Match: A0A7S1BKS9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BKS9_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 6.000e-22
Identity = 50/95 (52.63%), Postives = 65/95 (68.42%), Query Frame = 0
Query:   97 ERTAERA--FEYLVDYPCEFEIKVIGINEGSFADDIAATVSAVCEVETSDVRFTVRDTTSGRYQSITVHAPVKNANMLYKCYELIDEDPRVKFKF 189
            E+T E+A  FE LV+YPC F IK++G  EG F  D+   V+  C V  +DV ++ R+   G++ SITV APV+NA MLYK YE+I  DPRVKFKF
Sbjct:  203 EQTGEKARVFESLVEYPCTFPIKIVGAKEGQFVTDMVDLVAETCNVGRTDVTYSERE--KGKWTSITVQAPVENAQMLYKVYEVIGRDPRVKFKF 295          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig78.15933.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUE3_ECTSI7.850e-11496.11UPF0250 protein NE1487 n=2 Tax=Ectocarpus TaxID=28... [more]
A0A836CJU5_9STRA6.000e-3857.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C812_9STRA2.600e-3455.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U5NVB4_9STRA3.390e-2552.63Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S1Z075_9STRA4.480e-2447.79Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2SR06_9STRA1.470e-2352.33Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
B5Y5R9_PHATC4.330e-2351.58Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A6T7ELE2_9STRA3.370e-2254.26Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A1Z5K932_FISSO5.550e-2252.27Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S1BKS9_9STRA6.000e-2252.63Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.260coord: 101..188
e-value: 3.5E-13
score: 51.8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..189
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..12
IPR007454Uncharacterised protein family UPF0250PFAMPF04359DUF493coord: 107..187
e-value: 1.6E-18
score: 67.1
IPR027471YbeD-like domain superfamilySUPERFAMILY117991YbeD/HP0495-likecoord: 104..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig78contigE-siliculosus-1a_M_contig78:679133..682178 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig78.15933.1mRNA_E-siliculosus-1a_M_contig78.15933.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig78 678975..682420 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig78.15933.1 ID=prot_E-siliculosus-1a_M_contig78.15933.1|Name=mRNA_E-siliculosus-1a_M_contig78.15933.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=190bp
MRVQLVTTAMVLRLATRSFGFSPASSGGIAAQVSSRRAAARSHGRHTRPS
AAAFSSRPSPAAARPTGSRPPATARKMVLRPDWEREGRVHGLRMPRERTA
ERAFEYLVDYPCEFEIKVIGINEGSFADDIAATVSAVCEVETSDVRFTVR
DTTSGRYQSITVHAPVKNANMLYKCYELIDEDPRVKFKF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027471YbeD-like_sf
IPR007454UPF0250