prot_E-siliculosus-1a_M_contig78.15879.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig78.15879.1
Unique Nameprot_E-siliculosus-1a_M_contig78.15879.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length124
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig78.15879.1 vs. uniprot
Match: A0A212Q3R4_9GAMM (Uncharacterized membrane protein SirB2 n=2 Tax=unclassified Marinobacter TaxID=83889 RepID=A0A212Q3R4_9GAMM)

HSP 1 Score: 219 bits (559), Expect = 4.440e-72
Identity = 119/123 (96.75%), Postives = 121/123 (98.37%), Query Frame = 0
Query:    1 MTAYMILKHLHVTTAYLTITLFALRLLLDAVGRPGWRQTPLRFIPHINDTILLVAAISLVFVAGYASAMPGWLIAKIVLLVGYIIAGVFALKTTLGKPVRISAAVLALVQVTAILHLALAKPF 123
            MTAYMILKHLHVTTAYLTI LFALRLLLDAVG+PGWR+TPLRFIPHINDTILLVAAISLVFVAGYASAMPGWLIAKIVLLVGYIIAGVFALKTTLGKPVRISAAVLALVQ TAILHLALAKPF
Sbjct:    1 MTAYMILKHLHVTTAYLTIILFALRLLLDAVGKPGWRETPLRFIPHINDTILLVAAISLVFVAGYASAMPGWLIAKIVLLVGYIIAGVFALKTTLGKPVRISAAVLALVQFTAILHLALAKPF 123          
BLAST of mRNA_E-siliculosus-1a_M_contig78.15879.1 vs. uniprot
Match: A1U5E9_MARN8 (Invasion gene expression up-regulator, SirB n=26 Tax=Marinobacter TaxID=2742 RepID=A1U5E9_MARN8)

HSP 1 Score: 209 bits (531), Expect = 8.270e-68
Identity = 111/123 (90.24%), Postives = 118/123 (95.93%), Query Frame = 0
Query:    1 MTAYMILKHLHVTTAYLTITLFALRLLLDAVGRPGWRQTPLRFIPHINDTILLVAAISLVFVAGYASAMPGWLIAKIVLLVGYIIAGVFALKTTLGKPVRISAAVLALVQVTAILHLALAKPF 123
            MT+Y+ILKHLH+TTAYLTITLFALRLLLDAVGRPGWRQTPLRFIPHINDTILLVAAI+LVFVAGYASAMPGWLI KIVLL GYIIAGVFALKTT+GKP RI AAVLALVQV+AI HLA+AKPF
Sbjct:    1 MTSYIILKHLHMTTAYLTITLFALRLLLDAVGRPGWRQTPLRFIPHINDTILLVAAIALVFVAGYASAMPGWLITKIVLLFGYIIAGVFALKTTVGKPARIVAAVLALVQVSAIFHLAMAKPF 123          
BLAST of mRNA_E-siliculosus-1a_M_contig78.15879.1 vs. uniprot
Match: A0A0T6VY45_9GAMM (Invasion protein n=3 Tax=Marinobacter TaxID=2742 RepID=A0A0T6VY45_9GAMM)

HSP 1 Score: 206 bits (523), Expect = 1.330e-66
Identity = 107/121 (88.43%), Postives = 116/121 (95.87%), Query Frame = 0
Query:    3 AYMILKHLHVTTAYLTITLFALRLLLDAVGRPGWRQTPLRFIPHINDTILLVAAISLVFVAGYASAMPGWLIAKIVLLVGYIIAGVFALKTTLGKPVRISAAVLALVQVTAILHLALAKPF 123
            +Y ILKHLH+TTAYLTITLFALRLLLDAVGRPGWRQTPLRFIPHINDTILLVAAISL+FVAGYASAMPGWLIAK+VLLVGYI+AGVFALK TLGKP RI+AAVLAL+ V+AI HLA+AKPF
Sbjct:    2 SYTILKHLHMTTAYLTITLFALRLLLDAVGRPGWRQTPLRFIPHINDTILLVAAISLLFVAGYASAMPGWLIAKVVLLVGYIVAGVFALKVTLGKPARITAAVLALIMVSAIFHLAMAKPF 122          
BLAST of mRNA_E-siliculosus-1a_M_contig78.15879.1 vs. uniprot
Match: U7G468_9GAMM (Invasion protein n=14 Tax=Marinobacteraceae TaxID=2887365 RepID=U7G468_9GAMM)

HSP 1 Score: 204 bits (520), Expect = 3.810e-66
Identity = 107/121 (88.43%), Postives = 115/121 (95.04%), Query Frame = 0
Query:    3 AYMILKHLHVTTAYLTITLFALRLLLDAVGRPGWRQTPLRFIPHINDTILLVAAISLVFVAGYASAMPGWLIAKIVLLVGYIIAGVFALKTTLGKPVRISAAVLALVQVTAILHLALAKPF 123
            +Y ILKHLH+TTAYLTITLFALRLLLDAVGRPGWRQTPLRFIPHINDTILLVAAISL+FVAGYASAMPGWLIAKI+LL GYI+AGVFALK TLGKP RI+ AVLALVQV+AI HLA+AKPF
Sbjct:    2 SYTILKHLHMTTAYLTITLFALRLLLDAVGRPGWRQTPLRFIPHINDTILLVAAISLLFVAGYASAMPGWLIAKIILLFGYIVAGVFALKATLGKPARITGAVLALVQVSAIFHLAMAKPF 122          
BLAST of mRNA_E-siliculosus-1a_M_contig78.15879.1 vs. uniprot
Match: A0A3D5Q4A2_9GAMM (Invasion protein n=1 Tax=Marinobacter sp. TaxID=50741 RepID=A0A3D5Q4A2_9GAMM)

HSP 1 Score: 196 bits (497), Expect = 1.260e-62
Identity = 102/123 (82.93%), Postives = 114/123 (92.68%), Query Frame = 0
Query:    1 MTAYMILKHLHVTTAYLTITLFALRLLLDAVGRPGWRQTPLRFIPHINDTILLVAAISLVFVAGYASAMPGWLIAKIVLLVGYIIAGVFALKTTLGKPVRISAAVLALVQVTAILHLALAKPF 123
            M++Y+ILKHLH+TTAYLT+ LFALRLLLD VGRPGWRQTPLRFIPHINDT+LLVAAISL+FVAGYAS MPGWLIAKIVLL GYIIAGVFA+K T  KPVRI+A++LALVQVTAI HLA+ KPF
Sbjct:    1 MSSYLILKHLHMTTAYLTVVLFALRLLLDMVGRPGWRQTPLRFIPHINDTVLLVAAISLLFVAGYASDMPGWLIAKIVLLFGYIIAGVFAMKQTATKPVRITASLLALVQVTAIFHLAMTKPF 123          
BLAST of mRNA_E-siliculosus-1a_M_contig78.15879.1 vs. uniprot
Match: A0A0P7YFH6_9GAMM (Uncharacterized protein n=8 Tax=Marinobacter TaxID=2742 RepID=A0A0P7YFH6_9GAMM)

HSP 1 Score: 191 bits (486), Expect = 6.390e-61
Identity = 101/123 (82.11%), Postives = 112/123 (91.06%), Query Frame = 0
Query:    1 MTAYMILKHLHVTTAYLTITLFALRLLLDAVGRPGWRQTPLRFIPHINDTILLVAAISLVFVAGYASAMPGWLIAKIVLLVGYIIAGVFALKTTLGKPVRISAAVLALVQVTAILHLALAKPF 123
            M+AY++LK LH+ TAYLTI LFALRL+LDA GRPGWRQTPLRFIPHINDTILLV+AISL+FV GY SAMPGW+IAKIVLLVGYI+AGVFALKTT+ KPVRI AAVLAL QV  ILHLA+AKPF
Sbjct:    1 MSAYVLLKMLHMATAYLTIILFALRLVLDAAGRPGWRQTPLRFIPHINDTILLVSAISLLFVVGYISAMPGWIIAKIVLLVGYIVAGVFALKTTVAKPVRIIAAVLALAQVLGILHLAMAKPF 123          
BLAST of mRNA_E-siliculosus-1a_M_contig78.15879.1 vs. uniprot
Match: A0A1I3VTG4_9GAMM (Uncharacterized membrane protein SirB2 n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1I3VTG4_9GAMM)

HSP 1 Score: 191 bits (484), Expect = 1.290e-60
Identity = 98/122 (80.33%), Postives = 113/122 (92.62%), Query Frame = 0
Query:    1 MTAYMILKHLHVTTAYLTITLFALRLLLDAVGRPGWRQTPLRFIPHINDTILLVAAISLVFVAGYASAMPGWLIAKIVLLVGYIIAGVFALKTTLGKPVRISAAVLALVQVTAILHLALAKP 122
            M+AY+ILKHLH+TTAYLTI+LFALRLLLD VG+PGWRQTPLR+IPH NDT+LLV AISL+FVAGY SAMPGW+IAKI+LLVGYI+AG FA+K   GKPVRI+ AVLALVQV+AILHLA+AKP
Sbjct:    1 MSAYVILKHLHMTTAYLTISLFALRLLLDMVGKPGWRQTPLRWIPHANDTVLLVTAISLLFVAGYISAMPGWIIAKILLLVGYIVAGTFAIKPAFGKPVRIAGAVLALVQVSAILHLAMAKP 122          
BLAST of mRNA_E-siliculosus-1a_M_contig78.15879.1 vs. uniprot
Match: A0A4P6W8S4_9GAMM (Uncharacterized protein n=3 Tax=Marinobacter TaxID=2742 RepID=A0A4P6W8S4_9GAMM)

HSP 1 Score: 189 bits (479), Expect = 7.450e-60
Identity = 96/122 (78.69%), Postives = 112/122 (91.80%), Query Frame = 0
Query:    1 MTAYMILKHLHVTTAYLTITLFALRLLLDAVGRPGWRQTPLRFIPHINDTILLVAAISLVFVAGYASAMPGWLIAKIVLLVGYIIAGVFALKTTLGKPVRISAAVLALVQVTAILHLALAKP 122
            MTAYMILKHLH+T AYLTITLFALRLLLD VGRPGWR+TPLR+IPH NDT+LLVAA++L+FVAGYAS++PGWLIAKIVLLVGYI+AGVFA+K     PVR+ AA++ALVQV+AI HLA+AKP
Sbjct:    1 MTAYMILKHLHMTAAYLTITLFALRLLLDVVGRPGWRETPLRWIPHANDTVLLVAAVALLFVAGYASSVPGWLIAKIVLLVGYIVAGVFAIKPKFSTPVRVIAAIIALVQVSAIFHLAMAKP 122          
BLAST of mRNA_E-siliculosus-1a_M_contig78.15879.1 vs. uniprot
Match: A0A2T1KEM5_9GAMM (Invasion protein n=1 Tax=Marinobacter halophilus TaxID=1323740 RepID=A0A2T1KEM5_9GAMM)

HSP 1 Score: 188 bits (477), Expect = 1.500e-59
Identity = 99/123 (80.49%), Postives = 108/123 (87.80%), Query Frame = 0
Query:    1 MTAYMILKHLHVTTAYLTITLFALRLLLDAVGRPGWRQTPLRFIPHINDTILLVAAISLVFVAGYASAMPGWLIAKIVLLVGYIIAGVFALKTTLGKPVRISAAVLALVQVTAILHLALAKPF 123
            M +YM LK LH+  AYLT+ LF LRL LDA GRPGWRQTPLRFIPHINDTILLVAAI+L+FV GY S MPGWLIAKIVLL+GYIIAGVFALKTTL KPVRI+AAV+ALVQV AI HLA+AKPF
Sbjct:    1 MNSYMTLKMLHMAAAYLTVILFVLRLALDAAGRPGWRQTPLRFIPHINDTILLVAAIALLFVTGYISGMPGWLIAKIVLLIGYIIAGVFALKTTLSKPVRIAAAVIALVQVLAIFHLAMAKPF 123          
BLAST of mRNA_E-siliculosus-1a_M_contig78.15879.1 vs. uniprot
Match: A0A1V2DRX7_9GAMM (Invasion protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1V2DRX7_9GAMM)

HSP 1 Score: 186 bits (472), Expect = 8.690e-59
Identity = 96/122 (78.69%), Postives = 110/122 (90.16%), Query Frame = 0
Query:    1 MTAYMILKHLHVTTAYLTITLFALRLLLDAVGRPGWRQTPLRFIPHINDTILLVAAISLVFVAGYASAMPGWLIAKIVLLVGYIIAGVFALKTTLGKPVRISAAVLALVQVTAILHLALAKP 122
            MTAY ILKHLH+TTAYLT+TLFALRLLLDAVGRPGWRQTPLR+IPH NDTILLVAAI+L+FV GY S MPGW+IAKIVLL+GYI AGVFA+K   GKPVR++A++ ALV V+AI HLA+AKP
Sbjct:    1 MTAYAILKHLHMTTAYLTVTLFALRLLLDAVGRPGWRQTPLRWIPHANDTILLVAAIALLFVTGYISDMPGWVIAKIVLLIGYIAAGVFAMKPAFGKPVRVTASIAALVCVSAIFHLAMAKP 122          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig78.15879.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A212Q3R4_9GAMM4.440e-7296.75Uncharacterized membrane protein SirB2 n=2 Tax=unc... [more]
A1U5E9_MARN88.270e-6890.24Invasion gene expression up-regulator, SirB n=26 T... [more]
A0A0T6VY45_9GAMM1.330e-6688.43Invasion protein n=3 Tax=Marinobacter TaxID=2742 R... [more]
U7G468_9GAMM3.810e-6688.43Invasion protein n=14 Tax=Marinobacteraceae TaxID=... [more]
A0A3D5Q4A2_9GAMM1.260e-6282.93Invasion protein n=1 Tax=Marinobacter sp. TaxID=50... [more]
A0A0P7YFH6_9GAMM6.390e-6182.11Uncharacterized protein n=8 Tax=Marinobacter TaxID... [more]
A0A1I3VTG4_9GAMM1.290e-6080.33Uncharacterized membrane protein SirB2 n=2 Tax=Gam... [more]
A0A4P6W8S4_9GAMM7.450e-6078.69Uncharacterized protein n=3 Tax=Marinobacter TaxID... [more]
A0A2T1KEM5_9GAMM1.500e-5980.49Invasion protein n=1 Tax=Marinobacter halophilus T... [more]
A0A1V2DRX7_9GAMM8.690e-5978.69Invasion protein n=3 Tax=Gammaproteobacteria TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007360Invasion gene expression up-regulator, SirBPFAMPF04247SirBcoord: 4..122
e-value: 7.4E-32
score: 110.0
IPR007360Invasion gene expression up-regulator, SirBPIRSFPIRSF005610UCP005610coord: 1..121
e-value: 2.0E-23
score: 79.3
IPR007360Invasion gene expression up-regulator, SirBPANTHERPTHR39594FAMILY NOT NAMEDcoord: 1..121
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..66
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 29..48
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 121..123
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..120
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 67..71
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 92..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 72..91
NoneNo IPR availableTMHMMTMhelixcoord: 9..28
NoneNo IPR availableTMHMMTMhelixcoord: 101..120
NoneNo IPR availableTMHMMTMhelixcoord: 43..65
NoneNo IPR availableTMHMMTMhelixcoord: 72..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig78contigE-siliculosus-1a_M_contig78:9818..10189 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig78.15879.1mRNA_E-siliculosus-1a_M_contig78.15879.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig78 9818..10189 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig78.15879.1 ID=prot_E-siliculosus-1a_M_contig78.15879.1|Name=mRNA_E-siliculosus-1a_M_contig78.15879.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=124bp
MTAYMILKHLHVTTAYLTITLFALRLLLDAVGRPGWRQTPLRFIPHINDT
ILLVAAISLVFVAGYASAMPGWLIAKIVLLVGYIIAGVFALKTTLGKPVR
ISAAVLALVQVTAILHLALAKPF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007360SirB