prot_E-siliculosus-1a_M_contig77.15840.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig77.15840.1
Unique Nameprot_E-siliculosus-1a_M_contig77.15840.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length472
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig77.15840.1 vs. uniprot
Match: D7FWV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV8_ECTSI)

HSP 1 Score: 607 bits (1564), Expect = 8.710e-214
Identity = 421/472 (89.19%), Postives = 430/472 (91.10%), Query Frame = 0 
Query:    1 MTTEPCELDCPIQNYPGYPYGPGAESLFSKVLPFMLSAMVVAISWLAGRFIDKIEVSTPGAMTRVKSGTIGQSVKRSASHDKSDTHGFHSNASRGVGRSGVKMLEGVQELDGISAQDDEQNRLYHEEYGSQASQEDGDRYDALGDSPGAQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRSRASGSIYGHSQYGDGSSLGGSQYPGPVPSHFGASQMSSERTSYHASNGGGSSNGAGGIPAGVNAGRGGGEMMAHG-GHRQIPAPYGGXXXXXXXXXXXXXXXXXPTYNPNPYPHRSTSGVPRGHGLGGSGLVGVXXXXXXXXXXXXXXXXXXXXXVAHEASGFNLGSPPPYSQAASTLPKEPRPSVDSRPSLDGPQAWTTVDGQERRPNQALPAAAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGRSGGGSGSVSAPGPSSGFGESESEPGSVPSTFRG 471
            MTTEPCE+DC IQNYP +PYGPGAESLFSKVLPFMLSAMVVAISWLAGRFIDKIEVSTPGAMTRVKSGTIGQSVKRSASHDKSD+HGFHSNASRGVGRSGVKMLEGVQELDGISA+DDEQNRLY+EEYGSQASQEDG+RYDALGDSPGAQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRSRASGSIYGHSQYGDGSSLGGSQYPGPVPSHFGASQMSS+RTSYHASNGGGSSNGAGGIPAGVNAGRGGGE++AHG GHRQIPAPYGGXXXXXXXXXXXXXXXXXPTYNPNPYPHRSTSGVPRGHGLGG      XXXXXXXXXXXXXXXXXXXXXVAHEASGFNLGSPPPYSQAASTLPKEPRPSVDSRPSLDGPQAWTTVDGQERRPNQALPAA   XXXXXXXXX                 XXXXSSGRSGG             FGESESEPGSVPSTFRG
Sbjct:    1 MTTEPCEIDCTIQNYPTFPYGPGAESLFSKVLPFMLSAMVVAISWLAGRFIDKIEVSTPGAMTRVKSGTIGQSVKRSASHDKSDSHGFHSNASRGVGRSGVKMLEGVQELDGISARDDEQNRLYNEEYGSQASQEDGERYDALGDSPGAQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRSRASGSIYGHSQYGDGSSLGGSQYPGPVPSHFGASQMSSDRTSYHASNGGGSSNGAGGIPAGVNAGRGGGEIVAHGVGHRQIPAPYGGXXXXXXXXXXXXXXXXXPTYNPNPYPHRSTSGVPRGHGLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXVAHEASGFNLGSPPPYSQAASTLPKEPRPSVDSRPSLDGPQAWTTVDGQERRPNQALPAAXXXXXXXXXXXXSGFAPSSSATKGPVPAGXXXXSSGRSGGXXXXXXXXXXXXXFGESESEPGSVPSTFRG 472
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BLAST of mRNA_E-siliculosus-1a_M_contig77.15840.1 vs. uniprot
Match: A0A6H5JK61_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK61_9PHAE)

HSP 1 Score: 483 bits (1244), Expect = 1.610e-167
Identity = 293/320 (91.56%), Postives = 297/320 (92.81%), Query Frame = 0 
Query:    1 MTTEPCELDCPIQNYPGYPYGPGAESLFSKVLPFMLSAMVVAISWLAGRFIDKIEVSTPGAMTRVKSGTIGQSVKRSASHDKSDTHGFHSNASRGVGRSGVKMLEGVQELDGISAQDDEQNRLYHEEYGSQASQEDGDRYDALGDSPGAQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRSRASGSIYGHSQYGDGSSLGGSQYPGPVPSHFGASQMSSERTSYHASNGGGSSNGAGGIPAGVNAGRGGGEMMAHGG-HRQIPAPYGGXXXXXXXXXXXXXXXXXPTYNPNPYPHRSTSGVPRGHGLGGSGLVG 319
            MTTEPCELDCPIQNYP YPYGPGAESLFS+VLPFMLSAMVVAISWLAGRFIDKIEVSTPGAMTRVKSGTIGQSVKRSASHDKSD+HGFHSNASRGVGRSGVKMLEGVQELDGISAQDDEQNRLYHEEYGSQASQEDG+RYDALGDSPGAQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRSRASGSIYGHSQYGDGSSLGGS YPGPVPSHFGASQMSSERTSYHASNGGGSS+GAGGIPAGVNAGRG GEMMA GG HRQIPAPYGG                 PTYNPN YPHRSTSGVPRGHGLGGSGLVG
Sbjct:    1 MTTEPCELDCPIQNYPDYPYGPGAESLFSRVLPFMLSAMVVAISWLAGRFIDKIEVSTPGAMTRVKSGTIGQSVKRSASHDKSDSHGFHSNASRGVGRSGVKMLEGVQELDGISAQDDEQNRLYHEEYGSQASQEDGERYDALGDSPGAQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRSRASGSIYGHSQYGDGSSLGGSHYPGPVPSHFGASQMSSERTSYHASNGGGSSSGAGGIPAGVNAGRGRGEMMAPGGGHRQIPAPYGGGGDGTPAAGGAARMLPPPTYNPNLYPHRSTSGVPRGHGLGGSGLVG 320
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig77.15840.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWV8_ECTSI8.710e-21489.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK61_9PHAE1.610e-16791.56Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..47
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 48..471

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig77contigE-siliculosus-1a_M_contig77:506365..513631 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig77.15840.1mRNA_E-siliculosus-1a_M_contig77.15840.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig77 506279..514093 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig77.15840.1 ID=prot_E-siliculosus-1a_M_contig77.15840.1|Name=mRNA_E-siliculosus-1a_M_contig77.15840.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=472bp
MTTEPCELDCPIQNYPGYPYGPGAESLFSKVLPFMLSAMVVAISWLAGRF
IDKIEVSTPGAMTRVKSGTIGQSVKRSASHDKSDTHGFHSNASRGVGRSG
VKMLEGVQELDGISAQDDEQNRLYHEEYGSQASQEDGDRYDALGDSPGAQ
GPSSQGPRSPSVYSHFSQSVFSQSAYGPSAYGPSQRSRASGSIYGHSQYG
DGSSLGGSQYPGPVPSHFGASQMSSERTSYHASNGGGSSNGAGGIPAGVN
AGRGGGEMMAHGGHRQIPAPYGGGGDGTAAAGGAARMLPPPTYNPNPYPH
RSTSGVPRGHGLGGSGLVGVGGGGAAATAAAAAAAAATAAAVAHEASGFN
LGSPPPYSQAASTLPKEPRPSVDSRPSLDGPQAWTTVDGQERRPNQALPA
AAATAAARGGSAASGFAPSSAATEGPAPAGAAPASSGRSGGGSGSVSAPG
PSSGFGESESEPGSVPSTFRG*
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