prot_E-siliculosus-1a_M_contig77.15815.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig77.15815.1
Unique Nameprot_E-siliculosus-1a_M_contig77.15815.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length673
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig77.15815.1 vs. uniprot
Match: D8LT01_ECTSI (DNA polymerase delta subunit 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT01_ECTSI)

HSP 1 Score: 367 bits (942), Expect = 1.030e-117
Identity = 228/260 (87.69%), Postives = 234/260 (90.00%), Query Frame = 0
Query:    1 MAADAADANGGTQVQYLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYHFCQRQGERKVSATYLVVGRNGAGGSGAMEVKLVSAEDLDSTREALETVTCVHVYSVQAAPCSQPAADMSTQARIGLPTKDCCLWATDLEHTKEMVEETTEAGASLRTHRLSGVRCPESVDVPVPKAPPXXXXXXXXSPFAXXXXXXXXXXXXXXXXXXXKNASSKPKGKAIAPKDFFAAVGGGKGKGKAGEGKKGAVGAVAEEGKQA 260
            MAADAADA+GGTQVQYLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLY FCQRQGERKVSATYLVVGR+G GG GA+EVKLVSAE LDSTR+ALETVTCVHVYSVQ APCSQPAADMSTQ           LWATDLEHTKEMVEE+TEAGA+LRTHRLSGVRCPE VDVPVPKAPPXXXXXXXX    XXXXXXXXXXXXXXXXXXXKNASSKPKGKAIAPKDFFAA G  KGKGKAGEGKKGAVG  AEEGKQA
Sbjct:    1 MAADAADASGGTQVQYLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFCQRQGERKVSATYLVVGRSGIGGFGAVEVKLVSAEGLDSTRKALETVTCVHVYSVQPAPCSQPAADMSTQ-----------LWATDLEHTKEMVEESTEAGANLRTHRLSGVRCPEGVDVPVPKAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNASSKPKGKAIAPKDFFAAAGXXKGKGKAGEGKKGAVGTAAEEGKQA 249          
BLAST of mRNA_E-siliculosus-1a_M_contig77.15815.1 vs. uniprot
Match: A0A6H5KL09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL09_9PHAE)

HSP 1 Score: 251 bits (641), Expect = 5.190e-74
Identity = 197/229 (86.03%), Postives = 201/229 (87.77%), Query Frame = 0
Query:  445 SPVGDEGSDDEAGGREEPESTPGSGAATKGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRYDSDDEEETSKK-EPVRGAMDKFTAMDNGTGVDSNGVAVKRTKTVLKSRTYFEGGYMKTVNEEVEVTDDEEEALQPAKTNQTRTPPPGTKKAKMGVENKAEGSVETPAGAKGKDGATATKKKTAKAAPKSGGKQASMMSFFKKA 672
            SPVGD+ SDDEA GREE ESTPGSGAATK  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          GRYD           EPVRGAMDKFTA  NGTGVDS+GVAVKRTKTVLKSRTYFEGGYMKTVNEEVEVTDDEEEALQPAKTNQ+RTPPPGTKKAK+GVENKAEGSVETPAGAKGKDGATATKKKTAKAAPKSGGKQASMMSFFKKA
Sbjct:  115 SPVGDDSSDDEARGREEAESTPGSGAATKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAASTSAKRKGRYDXXXXXXXXXXXEPVRGAMDKFTAKGNGTGVDSSGVAVKRTKTVLKSRTYFEGGYMKTVNEEVEVTDDEEEALQPAKTNQSRTPPPGTKKAKIGVENKAEGSVETPAGAKGKDGATATKKKTAKAAPKSGGKQASMMSFFKKA 343          
BLAST of mRNA_E-siliculosus-1a_M_contig77.15815.1 vs. uniprot
Match: A0A8B9JG61_ASTMX (DNA polymerase delta subunit 3 n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A8B9JG61_ASTMX)

HSP 1 Score: 86.7 bits (213), Expect = 1.650e-14
Identity = 61/163 (37.42%), Postives = 82/163 (50.31%), Query Frame = 0
Query:   16 YLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYHFC-QRQGERK---VSATYLVVGRNGAGGSGAMEVKLVSAEDLDSTREALETVTCVHVYSVQAAPCSQPAADMSTQA-RIGLPTKDC-------CLWATDLEHTK-----EMVEETTEAGASLRTH 161
            YLD ++ +V D+ K+VT++WL+L L V  N AK+MLYH+  QR+ ER    + ATYLV G+    GS   +V +V  + LD T+  L+    VHVYSVQ A         ST    +    K+C       C  A  L HT+     E V E      SL  H
Sbjct:    5 YLDNIDEYVNDQNKIVTYKWLSLTLGVHVNTAKQMLYHYLDQRRKERSGTTLHATYLVSGKCSENGSVCHKVSVVREDQLDDTKSKLDKTISVHVYSVQKAELKDSGPLYSTDYDAVKENLKNCNKYSTIRCAAAVPLSHTELQKVQEKVVEKEATKPSLNDH 167          
BLAST of mRNA_E-siliculosus-1a_M_contig77.15815.1 vs. uniprot
Match: W5K564_ASTMX (DNA polymerase delta subunit 3 n=4 Tax=Astyanax mexicanus TaxID=7994 RepID=W5K564_ASTMX)

HSP 1 Score: 86.7 bits (213), Expect = 3.080e-14
Identity = 61/163 (37.42%), Postives = 82/163 (50.31%), Query Frame = 0
Query:   16 YLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYHFC-QRQGERK---VSATYLVVGRNGAGGSGAMEVKLVSAEDLDSTREALETVTCVHVYSVQAAPCSQPAADMSTQA-RIGLPTKDC-------CLWATDLEHTK-----EMVEETTEAGASLRTH 161
            YLD ++ +V D+ K+VT++WL+L L V  N AK+MLYH+  QR+ ER    + ATYLV G+    GS   +V +V  + LD T+  L+    VHVYSVQ A         ST    +    K+C       C  A  L HT+     E V E      SL  H
Sbjct:    5 YLDNIDEYVNDQNKIVTYKWLSLTLGVHVNTAKQMLYHYLDQRRKERSGTTLHATYLVSGKCSENGSVCHKVSVVREDQLDDTKSKLDKTISVHVYSVQKAELKDSGPLYSTDYDAVKENLKNCNKYSTIRCAAAVPLSHTELQKVQEKVVEKEATKPSLNDH 167          
BLAST of mRNA_E-siliculosus-1a_M_contig77.15815.1 vs. uniprot
Match: UPI001B88DBF9 (DNA polymerase delta subunit 3-like isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88DBF9)

HSP 1 Score: 83.6 bits (205), Expect = 2.980e-13
Identity = 44/99 (44.44%), Postives = 63/99 (63.64%), Query Frame = 0
Query:   16 YLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYHFCQRQGERK---VSATYLVVGRNGAGGSGAMEVK--LVSAEDLDSTREALETVTCVHVYSV 109
            YLD L+ +V DE +VVT++WL+ VL+V  N AK+ML+ FC++Q  +    +S TY V G   AG     E K  +VS E L+S + +L  V CVH+YS+
Sbjct:    7 YLDNLDEFVNDENRVVTYKWLSRVLTVHVNEAKRMLFAFCEQQRNKDHDDISVTYFVAGSTAAGMHSPQEYKCAVVSEEQLESYKASLAVVNCVHIYSI 105          
BLAST of mRNA_E-siliculosus-1a_M_contig77.15815.1 vs. uniprot
Match: A0A3B4E554_PYGNA (DNA polymerase delta subunit 3 n=2 Tax=Serrasalmidae TaxID=42495 RepID=A0A3B4E554_PYGNA)

HSP 1 Score: 81.3 bits (199), Expect = 1.000e-12
Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = 0
Query:   16 YLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYHFC-QRQGERK---VSATYLVVGRNGAGGSGAMEVKLVSAEDLDSTREALETVTCVHVYSVQAA 112
            YLD ++ +V D+ K+VT++WL+L L V  N AK+MLYH+  QR+ ER    + ATYLV G+    G+   +V +V  + L+ T+  LE    VHVYS+Q A
Sbjct:    5 YLDNIDEYVNDQNKIVTYKWLSLTLGVHVNIAKQMLYHYLEQRRKERSGTTLHATYLVSGKCSENGNVCHKVSVVREDQLEDTKSKLEKTISVHVYSIQKA 105          
BLAST of mRNA_E-siliculosus-1a_M_contig77.15815.1 vs. uniprot
Match: A0A2P2I6W8_9CRUS (DNA polymerase delta subunit 3 (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A2P2I6W8_9CRUS)

HSP 1 Score: 81.3 bits (199), Expect = 1.040e-12
Identity = 45/155 (29.03%), Postives = 80/155 (51.61%), Query Frame = 0
Query:   16 YLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYHFCQRQGERKVSATYLVVGRNGA-GGSGAMEVKLVSAEDLDSTREALETVTCVHVYSVQAAPCSQPAADMSTQARIGLPTKDCCLWATDLEHTKEMVEETTEAGASLRTHRLSGVRCP 169
            Y+D LE ++ DE +VVT++WL++ L +  N AK++LYH+   + E  +  TYLV+G +    G    ++ +  + +L++ ++ L+ V CVHVYS+               ++  L  +   L+  D + T+E +   TE G         G+ CP
Sbjct:   95 YMDNLEEYINDENRVVTYKWLSITLQIPCNTAKRLLYHYLSTKNEDDLHITYLVMGTSTTPDGIKQAQIHVAPSLELEAVKKLLDAVECVHVYSL---------------SKSKLKDQTAALYTADYDCTRENLATATEYG---------GIECP 225          
BLAST of mRNA_E-siliculosus-1a_M_contig77.15815.1 vs. uniprot
Match: A0A672MBU9_SINGR (DNA polymerase delta subunit 3 n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672MBU9_SINGR)

HSP 1 Score: 79.0 bits (193), Expect = 1.460e-12
Identity = 51/161 (31.68%), Postives = 80/161 (49.69%), Query Frame = 0
Query:   16 YLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYHFCQRQGERK----VSATYLVVGRNGAGGSGAMEVKLVSAEDLDSTREALETVTCVHVYSVQAAPCSQPAADMSTQARIGLPTKDCCLWATDLEHTKEMVEETTEAGASLRTHRLSGVRCPESV 172
            YLD ++ +V D+ K+VT++WL+L L V  N AK+MLYH+ Q++        + ATYLV G+    GS   +V +V  + LD+ +  ++    VHVYSVQ A     +                 L+ TD E  KE ++           ++ S +RC  +V
Sbjct:    6 YLDNIDEFVNDQNKIVTYKWLSLTLGVHVNTAKQMLYHYLQQKRNESSGTPLHATYLVSGKCVENGSTCHKVSVVREDKLDAVKAKMDVTISVHVYSVQRAELKDSSP----------------LYNTDYEAVKENLKNC---------NKYSAIRCAAAV 141          
BLAST of mRNA_E-siliculosus-1a_M_contig77.15815.1 vs. uniprot
Match: UPI0001CB96C3 (DNA polymerase delta subunit 3-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CB96C3)

HSP 1 Score: 80.1 bits (196), Expect = 2.570e-12
Identity = 48/142 (33.80%), Postives = 77/142 (54.23%), Query Frame = 0
Query:   16 YLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYHFCQRQGERKVSATYLVVGRNGAGGSGAME-VKLVSAEDLDSTREALETVTCVHVYSVQAAPCSQPAADMSTQARIGLPTKDCCLWATDLEHTKEMVEETTEAGA 156
            YL+ L+ +V+DE K+VT++WL+  LSV  N AK+MLY + Q+Q ++ +  TYLV G    G    M+ + LV    L++T+ +L+ VT VH+YS+         A                L+  D + TKE + ++ + GA
Sbjct:    7 YLENLQEYVVDENKIVTYKWLSKTLSVHVNQAKQMLYMYVQKQKKKDLCVTYLVGGEQKDGDGLVMKKLSLVRGNQLEATKCSLDKVTSVHIYSIHKCLLKDSNA----------------LYTVDYDITKEHLHQSNKFGA 132          
BLAST of mRNA_E-siliculosus-1a_M_contig77.15815.1 vs. uniprot
Match: A0A2P8XS77_BLAGE (DNA polymerase delta subunit 3 n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8XS77_BLAGE)

HSP 1 Score: 80.5 bits (197), Expect = 3.170e-12
Identity = 46/104 (44.23%), Postives = 64/104 (61.54%), Query Frame = 0
Query:    9 NGGTQVQYLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYHFCQRQGERKVSATYLVVG--RNGAGGSGAMEVKLVSAEDLDSTREALETVTCVHVYSVQ 110
            N      YL ++EG+++DE K+VT++ L+  L V  N AK++LY F  +QG  KV +TYLV G  +N  G S    V++V  EDL+  +E   TVT  HVYSVQ
Sbjct:    2 NASVFENYLHDIEGYIIDENKIVTYKLLSKYLDVNINTAKQLLYSFATQQGN-KVHSTYLVSGQLKNNNGNS----VQIVREEDLEKIKETFTTVTSEHVYSVQ 100          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig77.15815.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LT01_ECTSI1.030e-11787.69DNA polymerase delta subunit 3 n=1 Tax=Ectocarpus ... [more]
A0A6H5KL09_9PHAE5.190e-7486.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8B9JG61_ASTMX1.650e-1437.42DNA polymerase delta subunit 3 n=1 Tax=Astyanax me... [more]
W5K564_ASTMX3.080e-1437.42DNA polymerase delta subunit 3 n=4 Tax=Astyanax me... [more]
UPI001B88DBF92.980e-1344.44DNA polymerase delta subunit 3-like isoform X1 n=2... [more]
A0A3B4E554_PYGNA1.000e-1243.56DNA polymerase delta subunit 3 n=2 Tax=Serrasalmid... [more]
A0A2P2I6W8_9CRUS1.040e-1229.03DNA polymerase delta subunit 3 (Fragment) n=1 Tax=... [more]
A0A672MBU9_SINGR1.460e-1231.68DNA polymerase delta subunit 3 n=1 Tax=Sinocycloch... [more]
UPI0001CB96C32.570e-1233.80DNA polymerase delta subunit 3-like n=1 Tax=Saccog... [more]
A0A2P8XS77_BLAGE3.170e-1244.23DNA polymerase delta subunit 3 n=1 Tax=Blattella g... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019038DNA polymerase delta subunit 3PFAMPF09507CDC27coord: 29..113
e-value: 3.4E-24
score: 86.0
IPR019038DNA polymerase delta subunit 3PANTHERPTHR17598FAMILY NOT NAMEDcoord: 380..671
coord: 12..343
IPR041913DNA polymerase delta subunit 3 superfamilyGENE3D1.10.10.1300coord: 12..172
e-value: 6.2E-32
score: 112.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig77contigE-siliculosus-1a_M_contig77:127048..134067 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig77.15815.1mRNA_E-siliculosus-1a_M_contig77.15815.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig77 125905..134621 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig77.15815.1 ID=prot_E-siliculosus-1a_M_contig77.15815.1|Name=mRNA_E-siliculosus-1a_M_contig77.15815.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=673bp
MAADAADANGGTQVQYLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKM
LYHFCQRQGERKVSATYLVVGRNGAGGSGAMEVKLVSAEDLDSTREALET
VTCVHVYSVQAAPCSQPAADMSTQARIGLPTKDCCLWATDLEHTKEMVEE
TTEAGASLRTHRLSGVRCPESVDVPVPKAPPPPERVQEESPFAPRGGGTA
TGGAAGGGGGGRKNASSKPKGKAIAPKDFFAAVGGGKGKGKAGEGKKGAV
GAVAEEGKQAAVAAAAATASAADAKKKKAGGIGSFFGKASAAPPAAAKNK
KEDEEGGVGAEDVQPPPPQQQQQPKARLSKKMVVEEDDDEEEEDEVVPRR
GGDKDGGAGGGASDGEGDGLEDSEEEWDDGTAAKSTTPSKTNGGDVGSSG
SSSSSSKKGSTATGAAAAKKTKATAPPATTTSAAKKAKKSRSTASPVGDE
GSDDEAGGREEPESTPGSGAATKGRGKAKKAGRGSGAKGGSGSEAGSGKS
DDEEGDGEKKKRRRGKGTAASTSAKRKGRYDSDDEEETSKKEPVRGAMDK
FTAMDNGTGVDSNGVAVKRTKTVLKSRTYFEGGYMKTVNEEVEVTDDEEE
ALQPAKTNQTRTPPPGTKKAKMGVENKAEGSVETPAGAKGKDGATATKKK
TAKAAPKSGGKQASMMSFFKKA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041913POLD3_sf
IPR019038POLD3