prot_E-siliculosus-1a_M_contig77.15803.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig77.15803.1
Unique Name	prot_E-siliculosus-1a_M_contig77.15803.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	790

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig77.15803.1 vs. uniprot
Match: A0A6H5JU77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU77_9PHAE)

HSP 1 Score: 216 bits (550), Expect = 6.320e-57
Identity = 315/562 (56.05%), Postives = 316/562 (56.23%), Query Frame = 0

Query:  185 AMSTRIAARLAIAHNXXXXXXRHARLLDARSMRRSTTALLRPGVGVESHPPTLLPAVATATADNDAXXXXXXXXXXXXXXXXXXXXXXXXGWTRRVGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXDTGSDTESAPHPTARSGAAERNTATNSSVVPTAASPVEDAPTDAAAAVAVRRPGDAHRRRGPTSATVSPIEDAPTTGGVARRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGDGDIANSANSXXXXXXXVPGGXXXXXXXXXXXXXXXXXSPPGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----SSRSAAGVSAISARVHQLHKASVVGDLAAISRFIKDGGNLEAQSFCGRTALHYAAFYGHADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEARDTEGNAAQAYSEDEELYEMLARARRRLFPMPTAVLADAVERRPVAALGVYAAVL 742
            AMSTRIA RLAIAHN      RHARLLDARSMRRS TA LRPGVGVESHPP LLPAVA ATADNDA                        GWTR+VGEA        XXXX  XXXXXXXXXXX                                           TD  A  AV   G                ED    GG                                                                                           NGDGDIAN           VPGG                 SPPG TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    SSRSAAGVSAISARVHQLHKASVVGDLAAISRFIKDGGNLEAQSFCGRTALHYAAF     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ARDTEGNAAQAYSEDEELYEMLARARRRLFPMPTAVLADAVERRPVAALGVYAAVL
Sbjct:  121 AMSTRIATRLAIAHNNAAARRRHARLLDARSMRRSITASLRPGVGVESHPPALLPAVAIATADNDAAGSCSSSSSALTAARY--------GWTRQVGEARAAAAGVGXXXXTGXXXXXXXXXXX-------------------------------------------TDTVAVGAVATEG---------------AEDDSDFGGTTAA---------------------------------------------------------------------------------------NGDGDIANXXXXSSAA---VPGGAEAWVRAGTARAAVAVASPPGPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTNSSRSAAGVSAISARVHQLHKASVVGDLAAISRFIKDGGNLEAQSFCGRTALHYAAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARDTEGNAAQAYSEDEELYEMLARARRRLFPMPTAVLADAVERRPVAALGVYAAVL 526

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BLAST of mRNA_E-siliculosus-1a_M_contig77.15803.1 vs. uniprot
Match: D8LT48_ECTSI (UPF0020 domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT48_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 7.490e-35
Identity = 136/146 (93.15%), Postives = 136/146 (93.15%), Query Frame = 0

Query:  597 LHKASVVGDLAAISRFIKDGGNLEAQSFCGRTALHYAAFYGHADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEARDTEGNAAQAYSEDEELYEMLARARRRLFPMPTAVLADAVERRPVAALGVYAAVL 742
            LHKASVVGDLAAISRFIKDGGNLEAQSFCGRTAL          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEARDTEGNAAQAYSEDEELYEMLARARRRLFPMPTAVLADAVERRPVAALGVYAAVL
Sbjct:  534 LHKASVVGDLAAISRFIKDGGNLEAQSFCGRTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEARDTEGNAAQAYSEDEELYEMLARARRRLFPMPTAVLADAVERRPVAALGVYAAVL 679

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BLAST of mRNA_E-siliculosus-1a_M_contig77.15803.1 vs. uniprot
Match: A0A836C7K4_9STRA (Ankyrin repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7K4_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.160e-8
Identity = 29/44 (65.91%), Postives = 34/44 (77.27%), Query Frame = 0

Query:  596 QLHKASVVGDLAAISRFIKDGGNLEAQSFCGRTALHYAAFYGHA 639
            +LH  +VVGDLA     ++ G +LE QSFCGRTALHYAAFYGHA
Sbjct:    2 RLHGCAVVGDLANTLSQLEQGADLEGQSFCGRTALHYAAFYGHA 45

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig77.15803.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig77.15803.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5JU77_9PHAE	6.320e-57	56.05	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LT48_ECTSI	7.490e-35	93.15	UPF0020 domain-containing protein (Fragment) n=1 T...	[more]
A0A836C7K4_9STRA	1.160e-8	65.91	Ankyrin repeat-containing domain protein (Fragment...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	PRINTS	PR01415	ANKYRIN	coord: 626..641 score: 46.0 coord: 674..688 score: 43.89
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 658..687 e-value: 3.6E-5 score: 33.2 coord: 625..654 e-value: 6.8E-5 score: 32.3 coord: 592..621 e-value: 2400.0 score: 2.2
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 658..690 score: 14.506
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 625..657 score: 11.487
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 593..714 e-value: 1.3E-28 score: 101.3
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 595..707
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 597..689 e-value: 1.5E-12 score: 47.9
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 597..695 score: 29.043
None	No IPR available	PANTHER	PTHR24134	FAMILY NOT NAMED	coord: 611..709 coord: 592..652
None	No IPR available	PANTHER	PTHR24134:SF3	ANKYRIN REPEAT FAMILY PROTEIN	coord: 611..709 coord: 592..652

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig77	contig	E-siliculosus-1a_M_contig77:24893..29565 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig77.15803.1	mRNA_E-siliculosus-1a_M_contig77.15803.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig77 24893..29565 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig77.15803.1 ID=prot_E-siliculosus-1a_M_contig77.15803.1|Name=mRNA_E-siliculosus-1a_M_contig77.15803.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=790bp
NSSAVAGRDRPLHSSSRGSPSSQGSLPCRDKQQRDPKVGERESRAGGRPK
TELESNPSIMPVRRRDSSRASSSACRPEEEEEEEPLAVGEGGGGGGGGAI
YTEEPRTPVQSGGGDDELAVASATAAAAAVVVDRTATSSPPQPRPVAEPP
RGSPESPPAPPPPPAAAAPPAFGSPSHHADSSDSAMSTRIAARLAIAHNN
AAARRRHARLLDARSMRRSTTALLRPGVGVESHPPTLLPAVATATADNDA
AATAAATAGPGGSSTSSALAAASDGWTRRVGEARAAAAAAGVGGGGMMTG
SITDDDDDDNDTGSDTESAPHPTARSGAAERNTATNSSVVPTAASPVEDA
PTDAAAAVAVRRPGDAHRRRGPTSATVSPIEDAPTTGGVARRSSGGTLRR
RRSPVTTTTSLVVEDSPTDAAAVPRSGGALRRRGIYSSSSSSSSTTRTTA
AAVAVAAATTAAATEGAEDDSDFGGTTAANGDGDIANSANSGGTSSAAVP
GGAGAGVGAGTAAAAVAVASPPGRTRRGGGGGTTAIDGGDAGGAAAGQVA
ATAAAAGETGVAAAAAAAAGGINNNSAGNSSRSAAGVSAISARVHQLHKA
SVVGDLAAISRFIKDGGNLEAQSFCGRTALHYAAFYGHADVARALILGGA
NVCSRGGGNSTPLHFAAWGGNKPVVRLLLDYGADVEARDTEGNAAQAYSE
DEELYEMLARARRRLFPMPTAVLADAVERRPVAALGVYAAVLAAALVAAG
TLAVSLATAGAGVGGVGGGLVRSAAASAAAASDLASPHLW

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR020683	Ankyrin_rpt-contain_dom
IPR036770	Ankyrin_rpt-contain_sf
IPR002110	Ankyrin_rpt