prot_E-siliculosus-1a_M_contig766.15793.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig766.15793.1
Unique Nameprot_E-siliculosus-1a_M_contig766.15793.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length80
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig766.15793.1 vs. uniprot
Match: A0A2R5GI96_9STRA (Selenoprotein W n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GI96_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 3.040e-17
Identity = 38/76 (50.00%), Postives = 56/76 (73.68%), Query Frame = 0
Query:    2 YGRFSNALTAYLEDQFPDGEVEIIPLRDPGTTGNFEVTVLNTGDLIYSKKN-GQGRCESVADKQAVADKIREIIDS 76
            Y ++  AL   LE++F D +V+++   DPGTTGNFEVT+  TGDL++SK   GQG+C+S A+ QA+ DKI++ +DS
Sbjct:  327 YSKYFRALKQQLEEEFGD-DVKVVGQEDPGTTGNFEVTLTETGDLLHSKSTRGQGKCQSAAEVQAIVDKIQDFLDS 401          
BLAST of mRNA_E-siliculosus-1a_M_contig766.15793.1 vs. uniprot
Match: A0A1Z5K0H1_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K0H1_FISSO)

HSP 1 Score: 65.9 bits (159), Expect = 2.230e-12
Identity = 34/78 (43.59%), Postives = 52/78 (66.67%), Query Frame = 0
Query:    1 GYGRFSNALTAYLEDQFPD--GEVEIIPLRDPGTTGNFEVTVLNTGDLIYSKKNG-QGRCESVADKQAVADKIREIID 75
            GYG+   AL  YL  Q P     V +I   DP  TGNFEVTV+ TG++++SKK+G QG+ ES+ +++A+  ++ EI++
Sbjct:   11 GYGKQFRALKDYLSKQ-PKLIDRVAVIGKEDPMVTGNFEVTVIETGEVVHSKKHGGQGKAESLREREAIVTRLVEILE 87          
BLAST of mRNA_E-siliculosus-1a_M_contig766.15793.1 vs. uniprot
Match: F0YJ25_AURAN (Selenoprotein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJ25_AURAN)

HSP 1 Score: 64.3 bits (155), Expect = 8.810e-12
Identity = 35/77 (45.45%), Postives = 48/77 (62.34%), Query Frame = 0
Query:    1 GYGRFSNALTAYLEDQFPDGEVEIIPLRDPGTTGNFEVTVLNTGDLIYSKKN-GQGRCESVADKQAVADKIREIIDS 76
            GY +FS AL   +E +F  G+V +  + DPGTTGNFEVTV   G L++SK   G  +C+S    Q V D I+E +D+
Sbjct:   14 GYKKFSVALAETIEKEFT-GQVTVTQVGDPGTTGNFEVTV--AGKLVHSKTTMGHDKCQSGESTQKVIDAIQEAVDA 87          
BLAST of mRNA_E-siliculosus-1a_M_contig766.15793.1 vs. uniprot
Match: B7G7U2_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G7U2_PHATC)

HSP 1 Score: 66.2 bits (160), Expect = 6.840e-11
Identity = 32/78 (41.03%), Postives = 51/78 (65.38%), Query Frame = 0
Query:    1 GYGRFSNALTAYLEDQFPD--GEVEIIPLRDPGTTGNFEVTVLNTGDLIYSKKN-GQGRCESVADKQAVADKIREIID 75
            GYGR+ N L  +L  Q P    ++E++   DP  TGNFEV+V  TG L++SK+  GQG+  S  ++ A+ ++I+E++D
Sbjct:  372 GYGRYFNGLKDFLSSQ-PSVANKIELVGKEDPTVTGNFEVSVAATGQLLHSKRQAGQGKATSPGERAAILEQIKELLD 448          
BLAST of mRNA_E-siliculosus-1a_M_contig766.15793.1 vs. uniprot
Match: A0A8J6CBQ7_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CBQ7_DIALT)

HSP 1 Score: 59.7 bits (143), Expect = 9.770e-10
Identity = 33/78 (42.31%), Postives = 47/78 (60.26%), Query Frame = 0
Query:    2 YGRFSNALTAYLEDQFPDGEVEIIPLRDPGTTGNFEVTVLNTGD--LIYSK-KNGQGRCESVADKQAVADKIREIIDS 76
            Y RF   L   +E +F  G  +++P+R+ G+TGNFEV +++T    LI+SK K GQGRCES  +   V D I   + S
Sbjct:   31 YDRFYQQLKLEIESRF-GGRAKVVPIRNAGSTGNFEVRLVSTATPLLIHSKAKRGQGRCESEQEVDDVLDAIEGFLAS 107          
BLAST of mRNA_E-siliculosus-1a_M_contig766.15793.1 vs. uniprot
Match: A0A0G4F0G3_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4F0G3_9ALVE)

HSP 1 Score: 50.8 bits (120), Expect = 1.860e-6
Identity = 34/71 (47.89%), Postives = 42/71 (59.15%), Query Frame = 0
Query:    8 ALTAYLEDQFPDGEVEIIPLRDPGTTGNFEVTVLNTGDLIYSKKNG-QGRCESVADKQAVAD-KIREIIDS 76
            A    L  +FP G VE+  LRDPGTTGNFEV V   G+L++SKK G  G   +   KQ + + KI E I S
Sbjct:   21 AAKQLLLHKFPQG-VEVDLLRDPGTTGNFEVKV--NGELVHSKKTGGDGFLHNDKQKQEIVNGKISEAIAS 88          
BLAST of mRNA_E-siliculosus-1a_M_contig766.15793.1 vs. uniprot
Match: A0A1Q9CIX8_SYMMI (Integrase catalytic domain-containing protein (Fragment) n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9CIX8_SYMMI)

HSP 1 Score: 52.0 bits (123), Expect = 7.690e-6
Identity = 25/51 (49.02%), Postives = 34/51 (66.67%), Query Frame = 0
Query:    1 GYGRFSNALTAYLEDQFPDGEVEIIPLRDPGTTGNFEVTVLNTGDLIYSKK 51
            GYG+ + A    +   FP G V+++  RDPGTTGNFE+TV   G L++SKK
Sbjct: 1297 GYGKHAKATEELILSWFPKG-VKVVQARDPGTTGNFEITV--NGRLVHSKK 1344          
BLAST of mRNA_E-siliculosus-1a_M_contig766.15793.1 vs. uniprot
Match: A0A7S1FM53_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FM53_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 1.330e-5
Identity = 24/74 (32.43%), Postives = 40/74 (54.05%), Query Frame = 0
Query:    1 GYGRFSNALTAYLEDQFPDGEVEIIPLRDPGTTGNFEVTVLNTGDLIYSKKNGQGRCESVADKQAVADKIREII 74
            GY R+   L A+LE Q    ++ +   +D   TGNFEV ++ +  LI+S + G G   +  + QA+A  I  ++
Sbjct:   38 GYSRYFYKLKAFLESQPFGPQIVVQGFKDNRLTGNFEVVIVESEQLIHSARRGMGHRMNPMEMQAIAVHIERML 111          
BLAST of mRNA_E-siliculosus-1a_M_contig766.15793.1 vs. uniprot
Match: A0A7J6SWG0_PEROL (Uncharacterized protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6SWG0_PEROL)

HSP 1 Score: 46.6 bits (109), Expect = 4.980e-5
Identity = 20/34 (58.82%), Postives = 26/34 (76.47%), Query Frame = 0
Query:   22 VEIIPLRDPGTTGNFEVTVLNTGDLIYSKKNGQG 55
            VE +P +DPG TGNFEVTV   G +++SK+NG G
Sbjct:   13 VEFVPKKDPGVTGNFEVTV--DGAMVHSKQNGDG 44          
BLAST of mRNA_E-siliculosus-1a_M_contig766.15793.1 vs. uniprot
Match: A0A812Y1C0_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812Y1C0_9DINO)

HSP 1 Score: 49.3 bits (116), Expect = 6.580e-5
Identity = 34/78 (43.59%), Postives = 46/78 (58.97%), Query Frame = 0
Query:    4 RFSNALTAYLE-DQFPDGEVEIIPLRDPGTTGNFEVTVLNTGDLIYSKKN-GQGRCESV--ADKQAVADKIREIIDSL 77
            RF+   T  L    FP G V+++  RDPGTTGNFE+TV   G L++SKK   QG  E+   A K AV  +I + ++ L
Sbjct:  526 RFNGVATEELILSWFPKG-VKVVQARDPGTTGNFEITV--NGRLVHSKKTQSQGFFEAAPQAQKDAVKAEIAKEVEVL 600          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig766.15793.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A2R5GI96_9STRA3.040e-1750.00Selenoprotein W n=1 Tax=Hondaea fermentalgiana Tax... [more]
A0A1Z5K0H1_FISSO2.230e-1243.59Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
F0YJ25_AURAN8.810e-1245.45Selenoprotein n=1 Tax=Aureococcus anophagefferens ... [more]
B7G7U2_PHATC6.840e-1141.03Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A8J6CBQ7_DIALT9.770e-1042.31Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A0G4F0G3_9ALVE1.860e-647.89Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A1Q9CIX8_SYMMI7.690e-649.02Integrase catalytic domain-containing protein (Fra... [more]
A0A7S1FM53_9STRA1.330e-532.43Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7J6SWG0_PEROL4.980e-558.82Uncharacterized protein n=1 Tax=Perkinsus olseni T... [more]
A0A812Y1C0_9DINO6.580e-543.59Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 1..78
e-value: 5.2E-14
score: 54.1
IPR011893Selenoprotein, Rdx-typePFAMPF10262Rdxcoord: 7..66
e-value: 1.2E-6
score: 28.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig766contigE-siliculosus-1a_M_contig766:47..286 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig766.15793.1mRNA_E-siliculosus-1a_M_contig766.15793.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig766 47..286 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig766.15793.1 ID=prot_E-siliculosus-1a_M_contig766.15793.1|Name=mRNA_E-siliculosus-1a_M_contig766.15793.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=80bp
GYGRFSNALTAYLEDQFPDGEVEIIPLRDPGTTGNFEVTVLNTGDLIYSK
KNGQGRCESVADKQAVADKIREIIDSLAK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011893Selenoprotein_Rdx-typ