prot_E-siliculosus-1a_M_contig76.15788.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig76.15788.1
Unique Nameprot_E-siliculosus-1a_M_contig76.15788.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length623
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig76.15788.1 vs. uniprot
Match: D8LBB3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBB3_ECTSI)

HSP 1 Score: 1007 bits (2604), Expect = 0.000e+0
Identity = 546/576 (94.79%), Postives = 554/576 (96.18%), Query Frame = 0 
Query:   47 MRRLLNRQASRGPTSGADPASPFSTDSEDNQREPRGRSRDRMASDSTDGEVRSTLSAADGQRNRRRDERGRTSPSLLQLARQRSMQKLPGTLGSRSGRNSPTNIREEVEPQAEASASALGGRRSVKSWETPLNVGRGMGSGDDGDDGTLFRRGSGGYGTGKAQCDEEEPLLREEVADYVGSIDFRDGTGPSALPPNEVVRAFRDADEIALLGRGGEFWSRLMGDGHSRDQRHRSVGRGDGRAGSRGVGRESRGGGANGRRRRVVHVESATTGKFFKVYEGLGGSRGGSEAWSTSVRHPGGGDGTGEDGLEKEGREXXXXXXXXXXXXGFAEDEVRAAERLGIPVREVSLMRLNKGVEAGTLLVQGVLAGLTLASAYAMLLAESLESFVAAYEAQAGEIRRAMFFLCTLALMGTEDQLMQAKGKGEVWARLGWWGRLDLQGCVLLYGGCLVSSLVCAVADTGIANAYGSSAEGWYVSEMEDGLRSTVLLWYACNLARLLLAWIGWFLVCRRRWRASLLSDQSQIELKGQRDKLSAAEEQISRLNGRNLDPLTTKELQELRGSLKRALDNAERMIGLR 622
            MRRLLNRQASRGPTSGADPASPFSTDSEDNQREPR R  DRM SDSTDGEVRSTLSAADGQRNRRRDERGRTSPSLLQLARQRSMQK+PGT GS SGRNSPTNIREEVEPQAEASA+A+GGRRSVKSWETP NVG+GMGSGD+GDDGTLFRRGSGG+G G+AQ DEEEPLLREEVADYVGSIDFRDGTGPSALPPNEVVRAFRDADEIALLGRGGEFWSRL GDGH RDQRH SVGRGDGRAGSRGVGRE RGGGANGRRRRVVHVESATTGKFFKVYEGLGGSRGG EAWSTSVRHPGGGDG GEDGLEKEGRE  XXXXXXXXXX FAEDEVRAAERLGIPVREVSLMRLNKGVEAGTLLVQGVLAGLTLASAYAMLLAESLESFVAAYEAQAGEIRRAMFFLCTLALMGTEDQLMQAKGKGEVWARLGWWGRLDLQG VLLYGGCLVSSLVCAVADTGIANAYGSSAEGWYVSEMEDGLRSTVLLWY CNLARLLLAWIG FLVCRRRWRASLL DQSQIELKGQRDKL+AAEEQISRLNGRNLDPLTTKELQELRGSLKRALDNAERMIGLR
Sbjct:    1 MRRLLNRQASRGPTSGADPASPFSTDSEDNQREPRERFGDRMTSDSTDGEVRSTLSAADGQRNRRRDERGRTSPSLLQLARQRSMQKVPGTPGSTSGRNSPTNIREEVEPQAEASAAAVGGRRSVKSWETPHNVGQGMGSGDNGDDGTLFRRGSGGFGIGEAQFDEEEPLLREEVADYVGSIDFRDGTGPSALPPNEVVRAFRDADEIALLGRGGEFWSRLTGDGHGRDQRHHSVGRGDGRAGSRGVGREPRGGGANGRRRRVVHVESATTGKFFKVYEGLGGSRGGGEAWSTSVRHPGGGDGAGEDGLEKEGREGRXXXXXXXXXXSFAEDEVRAAERLGIPVREVSLMRLNKGVEAGTLLVQGVLAGLTLASAYAMLLAESLESFVAAYEAQAGEIRRAMFFLCTLALMGTEDQLMQAKGKGEVWARLGWWGRLDLQGSVLLYGGCLVSSLVCAVADTGIANAYGSSAEGWYVSEMEDGLRSTVLLWYGCNLARLLLAWIGLFLVCRRRWRASLLGDQSQIELKGQRDKLAAAEEQISRLNGRNLDPLTTKELQELRGSLKRALDNAERMIGLR 576
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig76.15788.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBB3_ECTSI0.000e+094.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 598..618
NoneNo IPR availableCOILSCoilCoilcoord: 564..591
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 428..487
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 533..553
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 514..532
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 407..427
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..406
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 554..622
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 488..513
NoneNo IPR availableTMHMMTMhelixcoord: 404..426
NoneNo IPR availableTMHMMTMhelixcoord: 532..554
NoneNo IPR availableTMHMMTMhelixcoord: 487..509
IPR029409Transmembrane protein 237PFAMPF15383TMEM237coord: 396..554
e-value: 2.8E-7
score: 29.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig76contigE-siliculosus-1a_M_contig76:752135..759208 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig76.15788.1mRNA_E-siliculosus-1a_M_contig76.15788.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig76 752135..759208 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig76.15788.1 ID=prot_E-siliculosus-1a_M_contig76.15788.1|Name=mRNA_E-siliculosus-1a_M_contig76.15788.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=623bp
MKFYPAAPTSDVSDDEVCASFFHCSANPLRPSISNLPVLRAGNNSTMRRL
LNRQASRGPTSGADPASPFSTDSEDNQREPRGRSRDRMASDSTDGEVRST
LSAADGQRNRRRDERGRTSPSLLQLARQRSMQKLPGTLGSRSGRNSPTNI
REEVEPQAEASASALGGRRSVKSWETPLNVGRGMGSGDDGDDGTLFRRGS
GGYGTGKAQCDEEEPLLREEVADYVGSIDFRDGTGPSALPPNEVVRAFRD
ADEIALLGRGGEFWSRLMGDGHSRDQRHRSVGRGDGRAGSRGVGRESRGG
GANGRRRRVVHVESATTGKFFKVYEGLGGSRGGSEAWSTSVRHPGGGDGT
GEDGLEKEGREGRAAGSGGGGAGGFAEDEVRAAERLGIPVREVSLMRLNK
GVEAGTLLVQGVLAGLTLASAYAMLLAESLESFVAAYEAQAGEIRRAMFF
LCTLALMGTEDQLMQAKGKGEVWARLGWWGRLDLQGCVLLYGGCLVSSLV
CAVADTGIANAYGSSAEGWYVSEMEDGLRSTVLLWYACNLARLLLAWIGW
FLVCRRRWRASLLSDQSQIELKGQRDKLSAAEEQISRLNGRNLDPLTTKE
LQELRGSLKRALDNAERMIGLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029409TMEM237