prot_E-siliculosus-1a_M_contig76.15715.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig76.15715.1
Unique Name	prot_E-siliculosus-1a_M_contig76.15715.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	335

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig76.15715.1 vs. uniprot
Match: D8LBI6_ECTSI (CS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBI6_ECTSI)

HSP 1 Score: 296 bits (758), Expect = 4.800e-96
Identity = 171/190 (90.00%), Postives = 173/190 (91.05%), Query Frame = 0

Query:    1 MATENVQEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGQDQWSFLTKAAVAVMVIIVCLIANKVIRGETPEEKRLRLRNQRRAKKKADSKNEPDVARSDVKVEVTGTMLKLSLRNQPVIAGNLFKPVDPEGCTWQIDNPGPGQPKEVTITLLKAEPAKSREAWWRAPLKGLETRRPAPKPADPEM 190
            MATENVQEA XXXXXXXXXXXXXXXX               G QDQWSFLTKAAVAVMVIIVCLIANKVIRGETPEEKRLRLRNQRRAKKKADSKNEPDV+RSDVKVEVTG+MLKLSLRNQPVIAGNLFKPVDPEGCTWQIDNPGPGQPKEVTITLLKAEPAKSREAWWRAPLKGLETRRPAPKPADPEM
Sbjct:    1 MATENVQEAAXXXXXXXXXXXXXXXXEGSPGKDDVEEMMLSGEQDQWSFLTKAAVAVMVIIVCLIANKVIRGETPEEKRLRLRNQRRAKKKADSKNEPDVSRSDVKVEVTGSMLKLSLRNQPVIAGNLFKPVDPEGCTWQIDNPGPGQPKEVTITLLKAEPAKSREAWWRAPLKGLETRRPAPKPADPEM 190

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BLAST of mRNA_E-siliculosus-1a_M_contig76.15715.1 vs. uniprot
Match: A0A6H5JLQ0_9PHAE (CS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLQ0_9PHAE)

HSP 1 Score: 251 bits (640), Expect = 4.950e-77
Identity = 179/325 (55.08%), Postives = 181/325 (55.69%), Query Frame = 0

Query:    1 MATENVQEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGQDQWSFLTKAAVAVMVIIVCLIANKVIRGETPEEKRLRLRNQRRAKKKADSKNEPD------------------------------------------------------------------------------------------------------VARSDVKVEVTGTMLKLSLRNQPVIAGNLFKPVDPEGCTWQIDNPGPGQPKEVTITLLKAEPAKSREAWWRAPLKGLETRRPAPKPADPEM-----------------------PGPAGVGAVG 200
            M TENVQEA XXXXXXXXXXXXXXXXX              G QDQWSFLTKAAVAV+VIIVCLIANKVIRGETPEEKRLRLRNQRRAKKKADSKNEPD                                                                                                      VARSDVKVEVTGTMLKLSLRNQPVIAGNLFKPVDPEGCTWQID+PGPGQPKEVTITLLKAEPAKSREAWWRAPLKGLETRRPAPKPADPEM                       PGPA VGA G
Sbjct:    1 MPTENVQEAAXXXXXXXXXXXXXXXXXASPGEDDVEEMILSGEQDQWSFLTKAAVAVLVIIVCLIANKVIRGETPEEKRLRLRNQRRAKKKADSKNEPDEIDRLLSSIVRRQPGQDPPPGAVPISAHVAARSVPDGGAGRGAGPASPAAPRTXXXXXXXXXXXAVGGRRGAPPPGAVDNRPKLRWDQSNEEVEIIIRVDPKVARSDVKVEVTGTMLKLSLRNQPVIAGNLFKPVDPEGCTWQIDDPGPGQPKEVTITLLKAEPAKSREAWWRAPLKGLETRRPAPKPADPEMVRKAIEAIKAKSAAGGGTKLTAKPGPAKVGAGG 325

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig76.15715.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig76.15715.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LBI6_ECTSI	4.800e-96	90.00	CS domain-containing protein n=1 Tax=Ectocarpus si...	[more]
A0A6H5JLQ0_9PHAE	4.950e-77	55.08	CS domain-containing protein n=1 Tax=Ectocarpus sp...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 88..180 e-value: 8.8E-12 score: 47.0
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 99..175
IPR007052	CS domain	PFAM	PF04969	CS	coord: 100..158 e-value: 3.8E-7 score: 31.0
IPR007052	CS domain	PROSITE	PS51203	CS	coord: 64..173 score: 11.837
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..48
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 49..70
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 71..334

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig76	contig	E-siliculosus-1a_M_contig76:113355..121202 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig76.15715.1	mRNA_E-siliculosus-1a_M_contig76.15715.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig76 113337..121202 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig76.15715.1 ID=prot_E-siliculosus-1a_M_contig76.15715.1|Name=mRNA_E-siliculosus-1a_M_contig76.15715.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=335bp
MATENVQEAAAAAAEKLAEAAAAAGGEASPGEDDVEEMMLSGGQDQWSFL
TKAAVAVMVIIVCLIANKVIRGETPEEKRLRLRNQRRAKKKADSKNEPDV
ARSDVKVEVTGTMLKLSLRNQPVIAGNLFKPVDPEGCTWQIDNPGPGQPK
EVTITLLKAEPAKSREAWWRAPLKGLETRRPAPKPADPEMPGPAGVGAVG
GGGQQAAPGNTVTAAASNGNTPRSAAGTAGGPTPSTGVAAAGAGKPPAGA
GSGEAAGAAAAGAAAAAAAAAAATPPSSQKSGKGGGKKKNRKKNCCCRAT
LELKGGPEVKTKQKRTADSWGQARRAPPASVIAM*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007052	CS_dom
IPR008978	HSP20-like_chaperone