prot_E-siliculosus-1a_M_contig76.15709.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig76.15709.1
Unique Nameprot_E-siliculosus-1a_M_contig76.15709.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length225
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig76.15709.1 vs. uniprot
Match: D8LBJ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBJ2_ECTSI)

HSP 1 Score: 342 bits (878), Expect = 1.980e-117
Identity = 206/226 (91.15%), Postives = 208/226 (92.04%), Query Frame = 0 
Query:    1 MQQHLVVACLCLLASVDGSAPLLARPAPVQRAGFIVNEGGSKIVSGDGSXXXXXXXXXXXXXAAATPERPSLVSVGIRSGCAREKAATTATLRNKDRAGTSAASRLRGGSTWIPNPPVMVRESDTTPKTHNSAAEPVSSHPPTGASGSS-CNSRHGAEFAVSKQRIVDDSDSDTDS-FVEDXXXXXXXXXXXXXXXXRVGALPSFPRTLPATHGKAPFNKKFAWVP 224
            M+QHLVVACLCLLASVDGSAPLLARPAPVQRAGFIVNEGGSKIVSGD S             AAATPERPS VSVGIRSGCAREKAATTATLRNKDRAGTSAASRLRGGSTWIPNPPVMVRESDTTPKTHNSAAEPVSSHPPTGASGSS C+SRHGAEFAVSKQRIVDDSDSDTDS FVE XXXXXXXXXXXXXXXXRVGALPSFPRTLPATHGKAPFNKKFAWVP
Sbjct:    1 MKQHLVVACLCLLASVDGSAPLLARPAPVQRAGFIVNEGGSKIVSGDSSSSSGSNVVTEE--AAATPERPSFVSVGIRSGCAREKAATTATLRNKDRAGTSAASRLRGGSTWIPNPPVMVRESDTTPKTHNSAAEPVSSHPPTGASGSSSCHSRHGAEFAVSKQRIVDDSDSDTDSSFVEXXXXXXXXXXXXXXXXXRVGALPSFPRTLPATHGKAPFNKKFAWVP 224
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig76.15709.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBJ2_ECTSI1.980e-11791.15Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..224
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.771

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig76contigE-siliculosus-1a_M_contig76:53266..55657 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig76.15709.1mRNA_E-siliculosus-1a_M_contig76.15709.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig76 53266..56589 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig76.15709.1 ID=prot_E-siliculosus-1a_M_contig76.15709.1|Name=mRNA_E-siliculosus-1a_M_contig76.15709.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=225bp
MQQHLVVACLCLLASVDGSAPLLARPAPVQRAGFIVNEGGSKIVSGDGSS
SSSSASNVVAEEAAATPERPSLVSVGIRSGCAREKAATTATLRNKDRAGT
SAASRLRGGSTWIPNPPVMVRESDTTPKTHNSAAEPVSSHPPTGASGSSC
NSRHGAEFAVSKQRIVDDSDSDTDSFVEDEDQGGVAGSGGGGGGGRVGAL
PSFPRTLPATHGKAPFNKKFAWVP*
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