prot_E-siliculosus-1a_M_contig76.15703.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig76.15703.1
Unique Nameprot_E-siliculosus-1a_M_contig76.15703.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length701
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig76.15703.1 vs. uniprot
Match: D8LBJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBJ7_ECTSI)

HSP 1 Score: 1016 bits (2627), Expect = 0.000e+0
Identity = 611/704 (86.79%), Postives = 620/704 (88.07%), Query Frame = 0 
Query:    1 MESDAKAAKAKLAEAAASPGAWRAVDWKNGPRSSTPVTPSAVALCRLFTDITERYRPLRDPLKQLRFAKHVQEPVLRLVRGASYTVTTXXXXXXXXXXXXXXXVASAADGLTATWAAALEAAMVGPGQEDGGDKSPVGRWRGYCLALASCAYVCAVLRESEDDMLFADMAETAAAAWAAAREVSGEGRAARPSSSLGSVGNVVGAAVGGVSHAVTELATTAETATAGVARAVGVQGSIIGPTHAISAALTSLKGAARRVRKGASGNRNXXXXXXXXXXXXXXXXXXXXXXXDGGIRDDGSDEGVAGEVEVGDGGYGGDATAATEKGEAPAAADTVVGGEFEGSVFGEESRRYEVMLEAMLRGAVESCRDGFLWRTRSYLRAWDRGIAVVVRASXXXXXXXXXXXXXXXXXX---AEPSGRLCEGVELLETALGVAEGCLPPGQFQQFWTALASELDLTLVKQIVVRRVEMTQDEGLQLLADLKVLMGPFDSLARRRPERHFPALAEAAVLLSLEKVQMMTDFRLHLDRDPCPTHATAPIIGNLPCFRLLFRCRQSQLRSLSSGLDAHGGGVEEAVRGGGWDGWREEGGALSPEGTQMRDMLENVGVRRMGPAEASILLDKRLKGDRLAVLGYLSAAAGENGXXXXXX-SHPAAAGFAEAGVVGVAPRGGDGGPDGAFTGSGVGGAGVGGSREGAVPREAVSSFG 700
            MESDAKAAKAKLAEAAASPGAWRAVDWKNGPRSSTPVTPSAVALCRLF+D+TERYRPLRDPLKQLRFAKHVQEPVLR   G              XXXXXXXXV SAADGLTATWAAALEAAMVGPGQEDGGDKSP+GRWRGYCLALASCAYVCAVLRESEDDMLFADMAETAAAAWAAAREVSGEGRAARPSSSLGSVGNVVGAAVGGVSHAVTELATTAETATAGVARAVGVQGSIIGPTHAISAALTSLKGAARRVRKGASGNRN                       DGG+RDDGSDEGVAGEVEVGDGG+ GDAT ATEK EAPAAADTVVGGEFEGSVFGEE+RRYEVMLEAMLRGAVESCRDGFLWRTRSYLRAWDRGIAVVVRA XXXXXXXXXXXXXXXXXX   AEPSGRLCEGVELLETALGVAEGCLPPGQFQQFWTALASELDLTLVKQIV RRVEM+QDEGLQLLADLKVLMGPFDSLARRRPERHFPALAEAAVLLSLEK     D R H  +    T  T  I G+L          QSQLRSLSSGLDAHGGGVEEAVRGGGWDGWREEGGALSPEGTQMRDMLENVGVRRMGPAEASILLDKRLKGDRLAVLGYLSAAAGE  XXXXXX SHPAAAGFAEAGVVGVAPRGGDG PDG FTG GVGG GVGGSREGAVPREAVSSFG
Sbjct:  436 MESDAKAAKAKLAEAAASPGAWRAVDWKNGPRSSTPVTPSAVALCRLFSDVTERYRPLRDPLKQLRFAKHVQEPVLRSASGGGEATK-----GAPXXXXXXXXVTSAADGLTATWAAALEAAMVGPGQEDGGDKSPIGRWRGYCLALASCAYVCAVLRESEDDMLFADMAETAAAAWAAAREVSGEGRAARPSSSLGSVGNVVGAAVGGVSHAVTELATTAETATAGVARAVGVQGSIIGPTHAISAALTSLKGAARRVRKGASGNRNNGTDSGSGGAGTAASMIVEEEG-DGGVRDDGSDEGVAGEVEVGDGGFVGDATTATEKREAPAAADTVVGGEFEGSVFGEEARRYEVMLEAMLRGAVESCRDGFLWRTRSYLRAWDRGIAVVVRAXXXXXXXXXXXXXXXXXXXXXXAEPSGRLCEGVELLETALGVAEGCLPPGQFQQFWTALASELDLTLVKQIVARRVEMSQDEGLQLLADLKVLMGPFDSLARRRPERHFPALAEAAVLLSLEK-----DGRTHARKGMNTTKRTLHIEGSL--------FAQSQLRSLSSGLDAHGGGVEEAVRGGGWDGWREEGGALSPEGTQMRDMLENVGVRRMGPAEASILLDKRLKGDRLAVLGYLSAAAGEXXXXXXXXXSHPAAAGFAEAGVVGVAPRGGDGRPDGTFTGPGVGGGGVGGSREGAVPREAVSSFG 1120
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BLAST of mRNA_E-siliculosus-1a_M_contig76.15703.1 vs. uniprot
Match: A0A6H5JXK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK1_9PHAE)

HSP 1 Score: 714 bits (1842), Expect = 2.900e-251
Identity = 466/581 (80.21%), Postives = 471/581 (81.07%), Query Frame = 0 
Query:  123 MVGPGQEDGGDKSPVGRWRGYCLALASCAYVCAVLRESEDDMLFADMAETAAAAWAAAREVSGEGRAARPSSSLGSVGNVVGAAVGGVSHAVTELATTAETATAGVARAVGVQGSIIGPTHAISAALTSLKGAARRVRKGASGNRNXXXXXXXXXXXXXXXXXXXXXXXDGGIRDDGSDEGVAGEVEVGDGGYGGDATAATEKGEAPAAADTVVGGEFEGSVFGEESRRYEVMLEAMLRGAVESCRDGFLWRTRSYLRAWDRGIAVVVRASXXXXXXXXXXXXXXXXXX---AEPSGRLCEGVELLETALGVAEGCLPPGQFQQFWTALASELDLTLVKQIVVRRVEMTQDEGLQLLADLKVLMGPFDSLARRRPERHFPALAEAAVLLSLEKVQMMTDFRLHLDRDPCPTHATAPIIGNLPCFRLLFRCRQSQLRSLSSGLDAHGGGVEEAVRGGGWDGWREEGGALSPEGTQMRDMLENVGVRRMGPAEASILLDKRLKGDRLAVLGYLSAAAGENGXXXXXXSHPAAAGFAEAGVVGVAPRGGDGGPDGAFTGSGVGGAGVGGSREGAVPREAVSSFG 700
            MVGPGQEDGGDKSP+GRWRGYCL LASCAYVCAVLRESEDDMLFADMAE  AAAWAAAREVSGEGRAARPSSSLGSVGNVVGAAVGGVSHAVTELATTAETATAGVARAVGVQGSIIGPTHAISAALTSLKGAARRVRKGASGNRN     XXXXXXXXXXXXXXXXXX                                          TVVGGEFEGSVFGEE+RRYEVMLEAMLR AVESC DGFLWRTRSYLRAWDRGIAVVV ASXXXXXXXXXXXXXXXXXX   AEPSGRLCEGV+LLETALGVAEGCLPPGQFQQFWTALAS LDLTLVKQIV RRVEMTQDEGLQLLADLKVLMGPFDSLARRRPERHFPALAEAAVLLSLEK                                       SQLRSLSSGLDAHGG VEEAVRGGGWDGWREEGGALSPEGTQMRDMLENVGVRRMGPAEASILLDKRLKGDRLAVLGYLSAAAG+N XXXXXXS+PA AGF  AGVVGVAP GGDGG DGA TG  VGG GVG SREGA PREAVSSFG
Sbjct:    1 MVGPGQEDGGDKSPIGRWRGYCLVLASCAYVCAVLRESEDDMLFADMAEATAAAWAAAREVSGEGRAARPSSSLGSVGNVVGAAVGGVSHAVTELATTAETATAGVARAVGVQGSIIGPTHAISAALTSLKGAARRVRKGASGNRNNGAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXTVVGGEFEGSVFGEEARRYEVMLEAMLRSAVESCLDGFLWRTRSYLRAWDRGIAVVVHASXXXXXXXXXXXXXXXXXXSFAAEPSGRLCEGVQLLETALGVAEGCLPPGQFQQFWTALASGLDLTLVKQIVARRVEMTQDEGLQLLADLKVLMGPFDSLARRRPERHFPALAEAAVLLSLEK---------------------------------------SQLRSLSSGLDAHGGSVEEAVRGGGWDGWREEGGALSPEGTQMRDMLENVGVRRMGPAEASILLDKRLKGDRLAVLGYLSAAAGKN-XXXXXXSNPAVAGFTVAGVVGVAPSGGDGGVDGALTGPSVGGGGVGVSREGAAPREAVSSFG 539
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig76.15703.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBJ7_ECTSI0.000e+086.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXK1_9PHAE2.900e-25180.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007528RINT-1/Tip20PFAMPF04437RINT1_TIP1coord: 333..618
e-value: 1.2E-8
score: 34.3
IPR007528RINT-1/Tip20PANTHERPTHR13520RAD50-INTERACTING PROTEIN 1 RINT-1coord: 5..516

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig76contigE-siliculosus-1a_M_contig76:24337..34636 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig76.15703.1mRNA_E-siliculosus-1a_M_contig76.15703.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig76 18946..35102 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig76.15703.1 ID=prot_E-siliculosus-1a_M_contig76.15703.1|Name=mRNA_E-siliculosus-1a_M_contig76.15703.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=701bp
MESDAKAAKAKLAEAAASPGAWRAVDWKNGPRSSTPVTPSAVALCRLFTD
ITERYRPLRDPLKQLRFAKHVQEPVLRLVRGASYTVTTTSGGGGEASGAG
GGGVASAADGLTATWAAALEAAMVGPGQEDGGDKSPVGRWRGYCLALASC
AYVCAVLRESEDDMLFADMAETAAAAWAAAREVSGEGRAARPSSSLGSVG
NVVGAAVGGVSHAVTELATTAETATAGVARAVGVQGSIIGPTHAISAALT
SLKGAARRVRKGASGNRNNGNDSGSGGGAGTAATMIVEEEEDGGIRDDGS
DEGVAGEVEVGDGGYGGDATAATEKGEAPAAADTVVGGEFEGSVFGEESR
RYEVMLEAMLRGAVESCRDGFLWRTRSYLRAWDRGIAVVVRASSAAASSP
LPGGSSSSSSAAEPSGRLCEGVELLETALGVAEGCLPPGQFQQFWTALAS
ELDLTLVKQIVVRRVEMTQDEGLQLLADLKVLMGPFDSLARRRPERHFPA
LAEAAVLLSLEKVQMMTDFRLHLDRDPCPTHATAPIIGNLPCFRLLFRCR
QSQLRSLSSGLDAHGGGVEEAVRGGGWDGWREEGGALSPEGTQMRDMLEN
VGVRRMGPAEASILLDKRLKGDRLAVLGYLSAAAGENGGGSGGGSHPAAA
GFAEAGVVGVAPRGGDGGPDGAFTGSGVGGAGVGGSREGAVPREAVSSFG
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007528RINT1_Tip20