prot_E-siliculosus-1a_M_contig76.15701.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig76.15701.1
Unique Nameprot_E-siliculosus-1a_M_contig76.15701.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length232
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig76.15701.1 vs. uniprot
Match: D1J714_ECTSI (50S ribosomal protein L11, chloroplastic n=31 Tax=Phaeophyceae TaxID=2870 RepID=D1J714_ECTSI)

HSP 1 Score: 241 bits (614), Expect = 2.260e-78
Identity = 127/129 (98.45%), Postives = 128/129 (99.22%), Query Frame = 0 
Query:    1 MAKKVTSIIKLALSAGKAVPAPPVGPALSQHGVNISAFCKEYNAKTNDQIGLIIPVEISVYEDRSYTFILKTPPASVLLVKATNIKKGASEPNRQIVGSITKSEIEKIAKIKLPDLNTKNLDSAFKIIA 129
            MAKKVTSIIKLALSAGKAVPAPPVGPALSQHGVNISAFCKEYNAKTNDQIGLIIPVEISVYEDRSYTFILKTPPASVLLVKATNIKKGA+EPNRQIVGSI KSEIEKIAKIKLPDLNTKNLDSAFKIIA
Sbjct:    1 MAKKVTSIIKLALSAGKAVPAPPVGPALSQHGVNISAFCKEYNAKTNDQIGLIIPVEISVYEDRSYTFILKTPPASVLLVKATNIKKGAAEPNRQIVGSIPKSEIEKIAKIKLPDLNTKNLDSAFKIIA 129
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BLAST of mRNA_E-siliculosus-1a_M_contig76.15701.1 vs. uniprot
Match: A0A1I9LVW2_9PHAE (50S ribosomal protein L11, chloroplastic n=5 Tax=Ectocarpales TaxID=2877 RepID=A0A1I9LVW2_9PHAE)

HSP 1 Score: 236 bits (601), Expect = 2.140e-76
Identity = 123/129 (95.35%), Postives = 127/129 (98.45%), Query Frame = 0 
Query:    1 MAKKVTSIIKLALSAGKAVPAPPVGPALSQHGVNISAFCKEYNAKTNDQIGLIIPVEISVYEDRSYTFILKTPPASVLLVKATNIKKGASEPNRQIVGSITKSEIEKIAKIKLPDLNTKNLDSAFKIIA 129
            MAKKVTSIIKLALSAGKAVPAPPVGPALSQHGVNI AFCKEYNA+TNDQIGLIIPVEISVYEDRSYTFILKTPPASVLLVKATNIKKG+SEPNRQIVGSITK EIE+IAKIKLPDLNTKNL+SAFKIIA
Sbjct:    1 MAKKVTSIIKLALSAGKAVPAPPVGPALSQHGVNIPAFCKEYNARTNDQIGLIIPVEISVYEDRSYTFILKTPPASVLLVKATNIKKGSSEPNRQIVGSITKGEIERIAKIKLPDLNTKNLESAFKIIA 129
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BLAST of mRNA_E-siliculosus-1a_M_contig76.15701.1 vs. uniprot
Match: A0A8F0FB69_9PHAE (Ribosomal protein L11 n=2 Tax=Phaeophyceae TaxID=2870 RepID=A0A8F0FB69_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 1.100e-71
Identity = 117/129 (90.70%), Postives = 125/129 (96.90%), Query Frame = 0 
Query:    1 MAKKVTSIIKLALSAGKAVPAPPVGPALSQHGVNISAFCKEYNAKTNDQIGLIIPVEISVYEDRSYTFILKTPPASVLLVKATNIKKGASEPNRQIVGSITKSEIEKIAKIKLPDLNTKNLDSAFKIIA 129
            MAKKVTSIIKLAL+AGKAVPAPPVGPALSQHGVNISAFCKEYNA+T DQ GLIIPVEISVYEDRSYTFILKTPPASVLLV+A NIKKGASEPN+QIVGSITKSE++KIA+ KLPDLNTK+LDSAFKIIA
Sbjct:    1 MAKKVTSIIKLALAAGKAVPAPPVGPALSQHGVNISAFCKEYNARTADQSGLIIPVEISVYEDRSYTFILKTPPASVLLVQAINIKKGASEPNKQIVGSITKSELKKIAETKLPDLNTKSLDSAFKIIA 129
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BLAST of mRNA_E-siliculosus-1a_M_contig76.15701.1 vs. uniprot
Match: A0A141BSK3_9PHAE (50S ribosomal protein L11, chloroplastic n=17 Tax=Fucales TaxID=3009 RepID=A0A141BSK3_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 7.340e-70
Identity = 114/129 (88.37%), Postives = 122/129 (94.57%), Query Frame = 0 
Query:    1 MAKKVTSIIKLALSAGKAVPAPPVGPALSQHGVNISAFCKEYNAKTNDQIGLIIPVEISVYEDRSYTFILKTPPASVLLVKATNIKKGASEPNRQIVGSITKSEIEKIAKIKLPDLNTKNLDSAFKIIA 129
            M KKVTSIIKLALSAGKAVPAPPVGPALSQHGVNI+AFCKEYNA+T DQ GLIIPVEISVYEDRSYTFILKTPPASVLL+KA NIKKGA+EPN+QI+GSI KSEI KIA+IKL DLNTKN+DSAFKIIA
Sbjct:    1 MGKKVTSIIKLALSAGKAVPAPPVGPALSQHGVNIAAFCKEYNARTADQSGLIIPVEISVYEDRSYTFILKTPPASVLLIKALNIKKGAAEPNKQIIGSIEKSEIVKIAQIKLSDLNTKNIDSAFKIIA 129
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BLAST of mRNA_E-siliculosus-1a_M_contig76.15701.1 vs. uniprot
Match: M2WWU5_GALSU ([pt] 50S ribosomal protein L1 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WWU5_GALSU)

HSP 1 Score: 220 bits (560), Expect = 6.080e-66
Identity = 115/224 (51.34%), Postives = 155/224 (69.20%), Query Frame = 0 
Query:    1 MAKKVTSIIKLALSAGKAVPAPPVGPALSQHGVNISAFCKEYNAKTNDQIGLIIPVEISVYEDRSYTFILKTPPASVLLVKATNIKKGASEPNRQIVGSITKSEIEKIAKIKLPDLNTKNLDSAFKIIAENRQKVEKRLYNQTEAISLLKETANANFIESVEAHISLAIDPKYSDQQLRSTLILPKGTGKTKRIAVLMPLETITSEYKDLADIIGSDDLIENIT 224
            M KK+ S++KLAL AGKA PAPPVGPAL QHGVNI  FCKEYNAKT D+IGLIIP EI +YED+S+ FILKTPP S L+ K  NI KG+ + N+  +G++  +++ +IA IK+PDLNT ++  A KI+    + +E+  Y   E I LLK  ANA F E+ E H++LAIDPKY+DQQLR++++LP+GT   K                  AD++GSD++++ IT
Sbjct:    1 MGKKLISVVKLALPAGKATPAPPVGPALGQHGVNIVMFCKEYNAKTLDKIGLIIPAEIYIYEDKSFNFILKTPPVSELIKKLLNINKGSDKCNQNKIGTLDYNQLVEIANIKMPDLNTNDISQAIKIVEGTAKNMEQS-YELREGIELLKTIANARFSETAEVHMNLAIDPKYNDQQLRASVLLPRGTELAKSAG---------------ADLVGSDEILDTIT 208
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BLAST of mRNA_E-siliculosus-1a_M_contig76.15701.1 vs. uniprot
Match: A0A2I4Q2L2_9PHAE (50S ribosomal protein L11, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2L2_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 7.570e-63
Identity = 102/128 (79.69%), Postives = 115/128 (89.84%), Query Frame = 0 
Query:    1 MAKKVTSIIKLALSAGKAVPAPPVGPALSQHGVNISAFCKEYNAKTNDQIGLIIPVEISVYEDRSYTFILKTPPASVLLVKATNIKKGASEPNRQIVGSITKSEIEKIAKIKLPDLNTKNLDSAFKII 128
            M KKVT+IIKLALSAGKAVPAPPVGPALSQHGVNISAFCKEYN +T DQ GLIIPVEISVYEDRSYTF+LKTPPAS LL+KA N  KGASEPN+Q +G+IT++++ KIA+ KLPDLNTKN+ SA KII
Sbjct:    1 MGKKVTTIIKLALSAGKAVPAPPVGPALSQHGVNISAFCKEYNGRTADQTGLIIPVEISVYEDRSYTFVLKTPPASFLLIKALNKTKGASEPNKQSIGAITEADLRKIAETKLPDLNTKNITSAIKII 128
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BLAST of mRNA_E-siliculosus-1a_M_contig76.15701.1 vs. uniprot
Match: A0A8E5XRL4_9PHAE (50S ribosomal protein L11, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRL4_9PHAE)

HSP 1 Score: 200 bits (508), Expect = 2.870e-62
Identity = 102/128 (79.69%), Postives = 116/128 (90.62%), Query Frame = 0 
Query:    1 MAKKVTSIIKLALSAGKAVPAPPVGPALSQHGVNISAFCKEYNAKTNDQIGLIIPVEISVYEDRSYTFILKTPPASVLLVKATNIKKGASEPNRQIVGSITKSEIEKIAKIKLPDLNTKNLDSAFKII 128
            M KK+T++IKLALSAGKAVPAPPVGPALSQHGVNI+AFCKEYNA+T DQ GLIIPVEISVYEDRSY+FILKTPPASVLL+KA  + KGAS+PN+Q VGSI   EI++IA+ KLPDLNTKNLD+A KII
Sbjct:    1 MPKKITNVIKLALSAGKAVPAPPVGPALSQHGVNIAAFCKEYNARTADQSGLIIPVEISVYEDRSYSFILKTPPASVLLIKAIKVAKGASQPNKQTVGSIRIEEIKQIAETKLPDLNTKNLDNACKII 128
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BLAST of mRNA_E-siliculosus-1a_M_contig76.15701.1 vs. uniprot
Match: A0A353J6C3_9BACT (Multifunctional fusion protein n=1 Tax=Candidatus Magasanikbacteria bacterium TaxID=2026717 RepID=A0A353J6C3_9BACT)

HSP 1 Score: 206 bits (525), Expect = 4.820e-62
Identity = 103/202 (50.99%), Postives = 149/202 (73.76%), Query Frame = 0 
Query:    1 MAKKVTSIIKLALSAGKAVPAPPVGPALSQHGVNISAFCKEYNAKTNDQIGLIIPVEISVYEDRSYTFILKTPPASVLLVKATNIKKGASEPNRQIVGSITKSEIEKIAKIKLPDLNTKNLDSAFKIIAENRQK----VEKRLYNQTEAISLLKETANANFIESVEAHISLAIDPKYSDQQLRSTLILPKGTGKTKRIAVLM 198
            MAKK  + IKL ++ G+A PAPPVGPAL QHG+NI AFC ++N KT D++G ++PV I+VY+DRSYTFI+KTPPA+ LL KA  I+KG+ +P+ + VG++T+++I +IA+IKLPDLNT  ++ A + I    ++    V K++Y   EA++L+ +TA   F  SVE H+ + IDP   +QQ+RST++LP GTGKTK+IA  +
Sbjct:    1 MAKKEVTKIKLQITGGQANPAPPVGPALGQHGLNIQAFCSDFNNKTKDKMGQVVPVVITVYDDRSYTFIMKTPPAAELLKKAAGIQKGSGKPHIEKVGTVTRAQIREIAEIKLPDLNTDTIEQAMRSIEGTARQMGLTVXKKVYLLDEALTLVLDTAKVKFDASVEVHVRVGIDPSKGEQQIRSTVVLPHGTGKTKKIAAFV 202
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BLAST of mRNA_E-siliculosus-1a_M_contig76.15701.1 vs. uniprot
Match: A0A6P0NF57_9CYAN (50S ribosomal protein L11 n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0NF57_9CYAN)

HSP 1 Score: 197 bits (502), Expect = 2.330e-61
Identity = 99/128 (77.34%), Postives = 113/128 (88.28%), Query Frame = 0 
Query:    1 MAKKVTSIIKLALSAGKAVPAPPVGPALSQHGVNISAFCKEYNAKTNDQIGLIIPVEISVYEDRSYTFILKTPPASVLLVKATNIKKGASEPNRQIVGSITKSEIEKIAKIKLPDLNTKNLDSAFKII 128
            M KK+T+IIKLAL AGKA+PAPPVGPALSQHGVNISAFCKEYN +T DQ G+IIPVEISVYEDRSYTF+LKTPPAS LL+KA N  KGASEPN+Q +GSIT+ +++ IA+ KLPDLNTKNL SA KII
Sbjct:    1 MGKKITTIIKLALPAGKAIPAPPVGPALSQHGVNISAFCKEYNGRTADQAGVIIPVEISVYEDRSYTFVLKTPPASFLLIKALNKTKGASEPNKQTIGSITEKDLQDIAEKKLPDLNTKNLSSAIKII 128
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig76.15701.1 vs. uniprot
Match: A0A516ZAC4_9STRA (50S ribosomal protein L11, chloroplastic n=1 Tax=Pseudopedinella elastica TaxID=35684 RepID=A0A516ZAC4_9STRA)

HSP 1 Score: 197 bits (502), Expect = 2.410e-61
Identity = 100/128 (78.12%), Postives = 114/128 (89.06%), Query Frame = 0 
Query:    1 MAKKVTSIIKLALSAGKAVPAPPVGPALSQHGVNISAFCKEYNAKTNDQIGLIIPVEISVYEDRSYTFILKTPPASVLLVKATNIKKGASEPNRQIVGSITKSEIEKIAKIKLPDLNTKNLDSAFKII 128
            MAKKV +IIKLAL AGKA PAPPVGPAL QHG NI+AFCKEYNAKT D+ GLIIPVEISVYEDRSY+FILKTPPASVLL+KA NI+KGA EPN+  VGSIT+ ++E+IAK KLPDLNTKNL+SA +I+
Sbjct:    1 MAKKVVAIIKLALPAGKATPAPPVGPALGQHGANIAAFCKEYNAKTADKGGLIIPVEISVYEDRSYSFILKTPPASVLLIKAANIQKGAGEPNKSTVGSITQIQLEEIAKTKLPDLNTKNLESAMRIV 128
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig76.15701.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D1J714_ECTSI2.260e-7898.4550S ribosomal protein L11, chloroplastic n=31 Tax=... [more]
A0A1I9LVW2_9PHAE2.140e-7695.3550S ribosomal protein L11, chloroplastic n=5 Tax=E... [more]
A0A8F0FB69_9PHAE1.100e-7190.70Ribosomal protein L11 n=2 Tax=Phaeophyceae TaxID=2... [more]
A0A141BSK3_9PHAE7.340e-7088.3750S ribosomal protein L11, chloroplastic n=17 Tax=... [more]
M2WWU5_GALSU6.080e-6651.34[pt] 50S ribosomal protein L1 n=2 Tax=Galdieria su... [more]
A0A2I4Q2L2_9PHAE7.570e-6379.6950S ribosomal protein L11, chloroplastic n=1 Tax=D... [more]
A0A8E5XRL4_9PHAE2.870e-6279.6950S ribosomal protein L11, chloroplastic n=1 Tax=I... [more]
A0A353J6C3_9BACT4.820e-6250.99Multifunctional fusion protein n=1 Tax=Candidatus ... [more]
A0A6P0NF57_9CYAN2.330e-6177.3450S ribosomal protein L11 n=1 Tax=Moorena sp. SIO3... [more]
A0A516ZAC4_9STRA2.410e-6178.1350S ribosomal protein L11, chloroplastic n=1 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000911Ribosomal protein L11/L12SMARTSM00649rl11ccoord: 9..136
e-value: 7.5E-60
score: 214.8
IPR000911Ribosomal protein L11/L12PANTHERPTHR1166160S RIBOSOMAL PROTEIN L12coord: 1..130
IPR000911Ribosomal protein L11/L12HAMAPMF_00736Ribosomal_L11coord: 5..141
score: 25.571
IPR006519Ribosomal protein L11, bacterial-typeTIGRFAMTIGR01632TIGR01632coord: 3..129
e-value: 1.2E-51
score: 172.3
IPR020784Ribosomal protein L11, N-terminalPFAMPF03946Ribosomal_L11_Ncoord: 2..66
e-value: 9.0E-28
score: 95.9
IPR036796Ribosomal protein L11/L12, N-terminal domain superfamilyGENE3D3.30.1550.10coord: 2..68
e-value: 2.6E-29
score: 102.7
IPR036796Ribosomal protein L11/L12, N-terminal domain superfamilySUPERFAMILY54747Ribosomal L11/L12e N-terminal domaincoord: 3..72
IPR020783Ribosomal protein L11, C-terminalPFAMPF00298Ribosomal_L11coord: 71..130
e-value: 4.5E-17
score: 62.3
IPR002143Ribosomal protein L1PIRSFPIRSF002155RPL1p_RPL1a_RPL10e_RPL1ocoord: 116..232
e-value: 2.4E-19
score: 67.5
IPR028364Ribosomal protein L1/ribosomal biogenesis proteinPFAMPF00687Ribosomal_L1coord: 149..225
e-value: 5.9E-9
score: 36.0
NoneNo IPR availableGENE3D3.30.190.20coord: 138..226
e-value: 4.5E-25
score: 90.0
NoneNo IPR availablePANTHERPTHR11661:SF10coord: 1..130
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..232
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePRODOMPD001367coord: 38..73
e-value: 5.0E-13
score: 180.0
IPR036769Ribosomal protein L11, C-terminal domain superfamilyGENE3D1.10.10.250coord: 69..135
e-value: 2.7E-19
score: 71.0
IPR036769Ribosomal protein L11, C-terminal domain superfamilySUPERFAMILY46906Ribosomal protein L11, C-terminal domaincoord: 67..129
IPR023674Ribosomal protein L1-likeSUPERFAMILY56808Ribosomal protein L1coord: 136..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig76contigE-siliculosus-1a_M_contig76:1374..2171 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig76.15701.1mRNA_E-siliculosus-1a_M_contig76.15701.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig76 1374..2171 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig76.15701.1 ID=prot_E-siliculosus-1a_M_contig76.15701.1|Name=mRNA_E-siliculosus-1a_M_contig76.15701.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=232bp
MAKKVTSIIKLALSAGKAVPAPPVGPALSQHGVNISAFCKEYNAKTNDQI
GLIIPVEISVYEDRSYTFILKTPPASVLLVKATNIKKGASEPNRQIVGSI
TKSEIEKIAKIKLPDLNTKNLDSAFKIIAENRQKVEKRLYNQTEAISLLK
ETANANFIESVEAHISLAIDPKYSDQQLRSTLILPKGTGKTKRIAVLMPL
ETITSEYKDLADIIGSDDLIENITKGDLNFDI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023674Ribosomal_L1-like
IPR036769Ribosomal_L11_C_sf
IPR028364Ribosomal_L1/biogenesis
IPR002143Ribosomal_L1
IPR020783Ribosomal_L11_C
IPR036796Ribosomal_L11/L12_N_sf
IPR020784Ribosomal_L11_N
IPR006519Ribosomal_L11_bac-typ
IPR000911Ribosomal_L11/L12