prot_E-siliculosus-1a_M_contig75.15678.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig75.15678.1
Unique Name	prot_E-siliculosus-1a_M_contig75.15678.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	244

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig75.15678.1 vs. uniprot
Match: D8LF39_ECTSI (Putative Translation Initiation Inhibitor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF39_ECTSI)

HSP 1 Score: 242 bits (618), Expect = 6.250e-78
Identity = 125/126 (99.21%), Postives = 126/126 (100.00%), Query Frame = 0

Query:   90 NYVLHRRSGDTLYMSGHLPKAPDGTLTTGKVGSDLEIEQGAEAARLVAINLITTMKAAAGDLDKIRLVKITGFVRSADGFTGQSAVLNGASDLLMEVFGREKGAHARSAVGVNALPLGVCVEIEAI 215
            NYVLHRRSGDTLYMSGHLPKAPDGTLTTGKVGSDLEIEQGAEAARLVAINLITTMKAAAGDLDKIRLVKITGFVRSADGFTGQSAVLNGASDLL+EVFGREKGAHARSAVGVNALPLGVCVEIEAI
Sbjct:   70 NYVLHRRSGDTLYMSGHLPKAPDGTLTTGKVGSDLEIEQGAEAARLVAINLITTMKAAAGDLDKIRLVKITGFVRSADGFTGQSAVLNGASDLLLEVFGREKGAHARSAVGVNALPLGVCVEIEAI 195

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BLAST of mRNA_E-siliculosus-1a_M_contig75.15678.1 vs. uniprot
Match: A0A7S3M7I1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7I1_9STRA)

HSP 1 Score: 159 bits (401), Expect = 2.840e-45
Identity = 83/153 (54.25%), Postives = 109/153 (71.24%), Query Frame = 0

Query:   64 VEERLKQLDITLPEVAPAGNALLWLWNYVLHRRSGDTLYMSGHLPKAPDGTLTTGKVGSDLEIEQGAEAARLVAINLITTMKAAAGDLDKIR-LVKITGFVRSADGFTGQSAVLNGASDLLMEVFGREKGAHARSAVGVNALPLGVCVEIEAI 215
            +E R+  L   LP   PA        NY+ + + G+T+Y +GHLP+  DGTL  G++G ++ +EQG +AAR+ A+N++ T+K+A GDLDK++ +VKITGFV SA  FT Q AVLNG SDLL E+FG E G HARSA+GVN LPLGV VEIEAI
Sbjct:   35 IEARIASLGYKLPNEPPAPKG-----NYMGYTKRGNTIYTAGHLPQKHDGTLVLGRLGENVTVEQGQDAARVAALNILATVKSAVGDLDKVKKIVKITGFVNSASDFTNQPAVLNGCSDLLGEIFGVEIGRHARSALGVNVLPLGVAVEIEAI 182

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BLAST of mRNA_E-siliculosus-1a_M_contig75.15678.1 vs. uniprot
Match: A0A4D9CNR0_9STRA (YjgF_endoribonc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CNR0_9STRA)

HSP 1 Score: 153 bits (387), Expect = 1.330e-43
Identity = 84/154 (54.55%), Postives = 110/154 (71.43%), Query Frame = 0

Query:   64 VEERLKQLDITLPEV-APAGNALLWLWNYVLHRRSGDTLYMSGHLPKAPDGTLTTGKVGSDLEIEQGAEAARLVAINLITTMKAAAGDLDKI-RLVKITGFVRSADGFTGQSAVLNGASDLLMEVFGREKGAHARSAVGVNALPLGVCVEIEAI 215
            +E RL QL I LP+V AP GN       Y L  R+G+ L+++GH+P    G L TGKVG+D  +E+G EAA+++AINL+ T+K+  GDLDK+ R+VK+ GFV   DGF+ Q  V+NGASD  ++VFG +KG HARSAVG NALPL + VEIEAI
Sbjct:    4 IEARLAQLGIDLPDVIAPKGN-------YALAVRTGNLLFLAGHIPLLKSGVLMTGKVGADKSLEEGQEAAQVIAINLLATLKSELGDLDKVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFG-DKGVHARSAVGTNALPLNIPVEIEAI 149

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BLAST of mRNA_E-siliculosus-1a_M_contig75.15678.1 vs. uniprot
Match: H3HDE8_PHYRM (YjgF_endoribonc domain-containing protein n=9 Tax=Peronosporaceae TaxID=4777 RepID=H3HDE8_PHYRM)

HSP 1 Score: 152 bits (383), Expect = 8.960e-43
Identity = 91/167 (54.49%), Postives = 113/167 (67.66%), Query Frame = 0

Query:   51 RPSSSATTMATGAVEERLKQLDITLPEVA-PAGNALLWLWNYVLHRRSGDTLYMSGHLPKAPDGTLTTGKVGSDLEIEQGAEAARLVAINLITTMKAAAGDLDKI-RLVKITGFVRSADGFTGQSAVLNGASDLLMEVFGREKGAHARSAVGVNALPLGVCVEIEAI 215
            +P S AT +    +E +L++L  TLP VA P GN       Y    RSG+TLY++GHLP+   G L  GKVG DL  EQG +AA  VA++L+ T+K   GDLDKI R+VK+ GFV   DGFT Q AV+NGASD + +VFG +KG HARSAVG NALPL V VEIEA+
Sbjct:    8 KPRSLATAVRNVHIERKLEELGYTLPAVADPKGN-------YRTSVRSGNTLYLAGHLPQPAGGDLILGKVGKDLTPEQGYDAAHYVALSLMATLKHEVGDLDKIKRVVKLVGFVNCVDGFTQQPAVINGASDTIGKVFG-DKGLHARSAVGTNALPLNVAVEIEAV 166

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BLAST of mRNA_E-siliculosus-1a_M_contig75.15678.1 vs. uniprot
Match: A0A812XST0_SYMMI (TCP17 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XST0_SYMMI)

HSP 1 Score: 149 bits (377), Expect = 1.980e-42
Identity = 76/121 (62.81%), Postives = 93/121 (76.86%), Query Frame = 0

Query:   96 RSGDTLYMSGHLPKAPDGTLTTGKVGSDLEIEQGAEAARLVAINLITTMKAAAGDLDKI-RLVKITGFVRSADGFTGQSAVLNGASDLLMEVFGREKGAHARSAVGVNALPLGVCVEIEAI 215
            +SG  +Y++GHLP+ P G L TGKVG D+ ++    AARL+  NLITTMK+A GDLDK+ R+VK+ GFV+    FT Q AV+NG SDL++EVFG EKG HARSAVG NALPLGV VEIEAI
Sbjct:    5 QSGKMIYLAGHLPQDPTGKLVTGKVGKDVPVDDAYAAARLIGTNLITTMKSAVGDLDKVKRIVKLVGFVQCEGDFTQQPAVVNGCSDLMVEVFGMEKGRHARSAVGTNALPLGVAVEIEAI 125

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BLAST of mRNA_E-siliculosus-1a_M_contig75.15678.1 vs. uniprot
Match: A0A6A3U578_9STRA (YjgF_endoribonc domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3U578_9STRA)

HSP 1 Score: 150 bits (379), Expect = 3.380e-42
Identity = 86/154 (55.84%), Postives = 107/154 (69.48%), Query Frame = 0

Query:   64 VEERLKQLDITLPEVA-PAGNALLWLWNYVLHRRSGDTLYMSGHLPKAPDGTLTTGKVGSDLEIEQGAEAARLVAINLITTMKAAAGDLDKI-RLVKITGFVRSADGFTGQSAVLNGASDLLMEVFGREKGAHARSAVGVNALPLGVCVEIEAI 215
            +E +L+QL  TLP VA P GN       Y    RSG+T+Y++GHLP+   G L  GK+G DL  EQG +AA  VA++L+ T+K   GDLDKI R+VK+ GFV   DGFT Q AV+NGASD + +VFG +KG HARSAVG NALPL V VEIEA+
Sbjct:   19 IERKLEQLGYTLPAVADPKGN-------YRTSVRSGNTIYLAGHLPQPAGGELILGKIGQDLTPEQGYDAAHYVALSLMATLKHEVGDLDKIKRVVKLVGFVNCVDGFTQQPAVINGASDTIGKVFG-DKGIHARSAVGTNALPLNVAVEIEAV 164

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BLAST of mRNA_E-siliculosus-1a_M_contig75.15678.1 vs. uniprot
Match: A0A662WS90_9STRA (YjgF_endoribonc domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WS90_9STRA)

HSP 1 Score: 151 bits (381), Expect = 4.930e-42
Identity = 86/154 (55.84%), Postives = 108/154 (70.13%), Query Frame = 0

Query:   64 VEERLKQLDITLPEVA-PAGNALLWLWNYVLHRRSGDTLYMSGHLPKAPDGTLTTGKVGSDLEIEQGAEAARLVAINLITTMKAAAGDLDKI-RLVKITGFVRSADGFTGQSAVLNGASDLLMEVFGREKGAHARSAVGVNALPLGVCVEIEAI 215
            +E +L++L  TLP VA P GN       Y    RSG+T+Y++GHLP+   G + TGKVG DL  E+G +AA  VA++L+ T+K   GDLDKI R+VK+ GFV   DGFT Q AV+NGASD + +VFG +KG HARSAVG NALPL V VEIEAI
Sbjct:   55 IERKLEELGYTLPAVATPKGN-------YRTAVRSGNTIYLAGHLPQPAGGDIITGKVGKDLTQEEGYDAAHYVALSLMATLKQEVGDLDKIKRVVKLVGFVNCVDGFTAQPAVINGASDTIGKVFG-DKGIHARSAVGTNALPLNVAVEIEAI 200

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BLAST of mRNA_E-siliculosus-1a_M_contig75.15678.1 vs. uniprot
Match: A0A3R7HFK6_9STRA (YjgF_endoribonc domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HFK6_9STRA)

HSP 1 Score: 150 bits (378), Expect = 5.230e-42
Identity = 88/167 (52.69%), Postives = 111/167 (66.47%), Query Frame = 0

Query:   51 RPSSSATTMATGAVEERLKQLDITLPEVA-PAGNALLWLWNYVLHRRSGDTLYMSGHLPKAPDGTLTTGKVGSDLEIEQGAEAARLVAINLITTMKAAAGDLDKI-RLVKITGFVRSADGFTGQSAVLNGASDLLMEVFGREKGAHARSAVGVNALPLGVCVEIEAI 215
            +P S AT +    +E +L++L   LPEVA P GN       Y    RSG+T+YM+GHLP+   G L TGKVG DL  E+  +AA  V+++++ T+K   GDLDKI R+VK+ GFV   DGF GQ AV+NGASD   +VFG  KG HARSAVG NALPL V VEIEA+
Sbjct:    9 KPRSLATAVRNVHIERKLEELGYVLPEVASPKGN-------YRTSVRSGNTIYMAGHLPQPAGGELITGKVGKDLTPEEAYDAAHYVSLSIMATLKQEVGDLDKIKRVVKLVGFVNCVDGFAGQPAVINGASDTFGKVFGN-KGVHARSAVGTNALPLNVAVEIEAV 167

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BLAST of mRNA_E-siliculosus-1a_M_contig75.15678.1 vs. uniprot
Match: M4BMK3_HYAAE (YjgF_endoribonc domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BMK3_HYAAE)

HSP 1 Score: 150 bits (380), Expect = 9.040e-42
Identity = 85/154 (55.19%), Postives = 108/154 (70.13%), Query Frame = 0

Query:   64 VEERLKQLDITLPEVA-PAGNALLWLWNYVLHRRSGDTLYMSGHLPKAPDGTLTTGKVGSDLEIEQGAEAARLVAINLITTMKAAAGDLDKI-RLVKITGFVRSADGFTGQSAVLNGASDLLMEVFGREKGAHARSAVGVNALPLGVCVEIEAI 215
            VE +L++L  TLP VA P GN       Y    RSG+T+Y++GHLP+   G L  GK+G DL +EQG +AA  VA++L+ T+K   GDLDKI R+VK+ GFV   DGF+ Q AV+NGASD + +VFG +KG HARSAVG NALPL V VEIEA+
Sbjct:   22 VERKLEELGYTLPAVAEPKGN-------YRTSVRSGNTIYLAGHLPQPAGGDLIVGKIGKDLTLEQGYDAAHYVALSLMATLKNEVGDLDKIKRIVKLVGFVNCVDGFSQQPAVINGASDTIGKVFG-DKGIHARSAVGTNALPLNVAVEIEAV 167

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BLAST of mRNA_E-siliculosus-1a_M_contig75.15678.1 vs. uniprot
Match: A0A835Z1E3_9STRA (Putative translation initiation inhibitor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1E3_9STRA)

HSP 1 Score: 148 bits (374), Expect = 2.290e-41
Identity = 84/154 (54.55%), Postives = 105/154 (68.18%), Query Frame = 0

Query:   64 VEERLKQLDITLPE-VAPAGNALLWLWNYVLHRRSGDTLYMSGHLPKAPDGTLTTGKVGSDLEIEQGAEAARLVAINLITTMKAAAGDLDKI-RLVKITGFVRSADGFTGQSAVLNGASDLLMEVFGREKGAHARSAVGVNALPLGVCVEIEAI 215
            +E RL Q  I L + V P GN       YV   RSG+TL+++GH+P  PD  L  GKVG D+  EQ    AR VAIN+++T+K   GDLD++ R+VK+ GFV   D FTGQ  V+NGASDL +EVFG+ KG HARSAVG NALPLG+ VEIEA+
Sbjct:   23 IEARLAQRGIQLSDPVPPKGN-------YVPAVRSGNTLFLAGHIPLMPDNNLAKGKVGKDVTPEQANAIARQVAINILSTLKVELGDLDRVTRIVKLVGFVNCTDDFTGQPGVINGASDLFVEVFGK-KGVHARSAVGTNALPLGIPVEIEAV 168

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig75.15678.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig75.15678.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LF39_ECTSI	6.250e-78	99.21	Putative Translation Initiation Inhibitor n=1 Tax=...	[more]
A0A7S3M7I1_9STRA	2.840e-45	54.25	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]
A0A4D9CNR0_9STRA	1.330e-43	54.55	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
H3HDE8_PHYRM	8.960e-43	54.49	YjgF_endoribonc domain-containing protein n=9 Tax=...	[more]
A0A812XST0_SYMMI	1.980e-42	62.81	TCP17 protein n=1 Tax=Symbiodinium microadriaticum...	[more]
A0A6A3U578_9STRA	3.380e-42	55.84	YjgF_endoribonc domain-containing protein n=4 Tax=...	[more]
A0A662WS90_9STRA	4.930e-42	55.84	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A3R7HFK6_9STRA	5.230e-42	52.69	YjgF_endoribonc domain-containing protein n=3 Tax=...	[more]
M4BMK3_HYAAE	9.040e-42	55.19	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]
A0A835Z1E3_9STRA	2.290e-41	54.55	Putative translation initiation inhibitor n=1 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013813	Endoribonuclease L-PSP/chorismate mutase-like	PFAM	PF14588	YjgF_endoribonc	coord: 65..210 e-value: 3.9E-22 score: 79.0
IPR035959	RutC-like superfamily	GENE3D	3.30.1330.40		coord: 60..216 e-value: 2.9E-55 score: 187.8
IPR035959	RutC-like superfamily	SUPERFAMILY	55298	YjgF-like	coord: 64..216
None	No IPR available	PANTHER	PTHR43760	FAMILY NOT NAMED	coord: 56..215
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 5..16
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 203..227
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..20
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 21..202
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..4
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 228..243
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..22 score: 0.683

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig75	contig	E-siliculosus-1a_M_contig75:715780..719174 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig75.15678.1	mRNA_E-siliculosus-1a_M_contig75.15678.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig75 715759..719923 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig75.15678.1 ID=prot_E-siliculosus-1a_M_contig75.15678.1|Name=mRNA_E-siliculosus-1a_M_contig75.15678.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=244bp
MLDRAFAFAFLVLWLCVVPRDSFILRQGPGNRQIGASPPLSHSCAASPTG
RPSSSATTMATGAVEERLKQLDITLPEVAPAGNALLWLWNYVLHRRSGDT
LYMSGHLPKAPDGTLTTGKVGSDLEIEQGAEAARLVAINLITTMKAAAGD
LDKIRLVKITGFVRSADGFTGQSAVLNGASDLLMEVFGREKGAHARSAVG
VNALPLGVCVEIEAIRLLLLLLLLLLLPSDTPWMMSMGDVGFL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR035959	RutC-like_sf
IPR013813	Endoribo_LPSP/chorism_mut-like