prot_E-siliculosus-1a_M_contig75.15670.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig75.15670.1
Unique Nameprot_E-siliculosus-1a_M_contig75.15670.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length467
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig75.15670.1 vs. uniprot
Match: D7FWP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWP8_ECTSI)

HSP 1 Score: 616 bits (1588), Expect = 9.940e-220
Identity = 313/333 (93.99%), Postives = 322/333 (96.70%), Query Frame = 0
Query:  134 MEGEHAVNVLDLAGMEDAPGLYDTVTQQCRVVFTNKKRLVFTQAKHSAEVGLPKMNCLASLLTCFHDRWSRRKWTSYYASIKASEVLQVFVQQTLTTSYEAYTCTFTDFLDVLCCPTGGTLKSEKDINGVTQTLGDHDPGNCMTRWDKTRFMRHALVIRYLDCASHSVQETTLMALASTPASKLYEMARAIDTSITIKANNWLSHKNLPNPLAAQPFRNQTPPQALIKQKPYKVLVFILFAVSLIFFAFNPTAAVFMLIAVFTAVFGAYSGSKSPVRRARKAVGFGMFGSGSKTTVSTNAFGLGVYLLSFFLGIGSTGSGDPSGTGTGSSFGS 466
            M+GEHAVNVLDLAGMEDAPGLYDTVTQQCRVVFTN+KRLVFTQA HSAEVGLPKMNCLASLLTCFHDRWSRRKWTSYYASIKASEVLQVFVQQTLTTSY+  TCTFTDFLDVLCCPTGGTLKSEKDINGVTQTLGDHDPG+CMTRWDKTRFMRHALVIRYLDCAS+SVQETTLMALASTPASKLYEMARAIDT+ITIKANNWLSHK+LPNPLAAQPFRNQTPPQALIKQKPYK+LVFIL  VSLIFFA NPTAAVFMLIAVF AVFGAYSGSKSPV RARK+ GFGMFGSGSKTTVSTNAFGL VYLLSFFLGIGS GSGDPSGTGTGSSFGS
Sbjct:    1 MKGEHAVNVLDLAGMEDAPGLYDTVTQQCRVVFTNEKRLVFTQANHSAEVGLPKMNCLASLLTCFHDRWSRRKWTSYYASIKASEVLQVFVQQTLTTSYQTSTCTFTDFLDVLCCPTGGTLKSEKDINGVTQTLGDHDPGSCMTRWDKTRFMRHALVIRYLDCASNSVQETTLMALASTPASKLYEMARAIDTNITIKANNWLSHKSLPNPLAAQPFRNQTPPQALIKQKPYKILVFILLVVSLIFFAINPTAAVFMLIAVFAAVFGAYSGSKSPVMRARKSAGFGMFGSGSKTTVSTNAFGLAVYLLSFFLGIGSIGSGDPSGTGTGSSFGS 333          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15670.1 vs. uniprot
Match: A0A6H5KA59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA59_9PHAE)

HSP 1 Score: 414 bits (1065), Expect = 1.350e-139
Identity = 219/368 (59.51%), Postives = 264/368 (71.74%), Query Frame = 0
Query:   89 QLDRQREALL-----VRSDLQDWDVECARKHLDAIKDSVQTLDDLHDSALMEGEHAVNVLDLAGMEDAPGLYDTVTQQCRVVFTNKKRLVFTQAKHSAEVGLPKMNCLASLLTCFHDRWSRRKWTSYYASIKASEVLQVFVQQTLTTSYEAYTCTFTDFLDVLCCPTGGTLKSEKDINGVTQTLGDHDPGNCMTRWDKTRFMRHALVIRYLDCASHSVQETTLMALASTPASKLYEMARAIDTSITIKANNWLSHKNLPNPLAAQPFRNQTPPQALIKQKPYKVLVFILFAVSLIFFAFNPTAAVFMLIAVFTAVFGAYSGSKSPVRRARKAVGFGMFGSGSKTTVSTNAFGLGVYLLSFFLGIGSTG 451
            Q+D     +L     V +DL++WD+ECA KHLDAIKDSV T DDLH+  LM+GE  VN LDLAG+ DAPGL+D +TQ+CRVVFTNKKRL+FTQA HSA VGLPKM CLASLLTC HDRWSRR WT+Y A+I ASEVLQVFV Q L+TSY+  TCTF D L+ LCCPTGG++ SEKDI+GVTQTLGDHDPG+CM+RWDKTRFMRHALVIRY+DCASHSV ET  MA  S PAS+LYEMAR+I+ +IT++  +W   K+LP  L A  F N +P                         A + TAAVFM+ AV  A++GAYSGS++  RR R A G+ +F   SK T+ +N  G GVY +S  LG+  TG
Sbjct:    3 QIDPSSRKMLQMTSGVAADLEEWDIECATKHLDAIKDSVTTHDDLHEFTLMKGEKVVNALDLAGLVDAPGLFDDLTQRCRVVFTNKKRLIFTQANHSAVVGLPKMRCLASLLTCCHDRWSRRTWTAYCATINASEVLQVFVHQELSTSYQTSTCTFNDILEFLCCPTGGSMYSEKDIDGVTQTLGDHDPGDCMSRWDKTRFMRHALVIRYVDCASHSVLETRAMAHPSVPASQLYEMARSIEANITVRMTDWTKSKSLPTALDASRFDNSSPXXXXXXXXXXXXXXXXXXXXXXXXXAVDTTAAVFMVFAVLVALYGAYSGSRTQRRRIRNA-GWWIFNV-SKKTLGSNGAGAGVYAISVILGLQGTG 368          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15670.1 vs. uniprot
Match: D7FH32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH32_ECTSI)

HSP 1 Score: 395 bits (1015), Expect = 1.090e-130
Identity = 221/420 (52.62%), Postives = 268/420 (63.81%), Query Frame = 0
Query:   57 KIEITAGMPPAANGAEIDKPYFHTEGYPFRGDQLDRQREALL--------------------------VRSDLQDWDVECARKHLDAIKDSVQTLDDLHDSALMEGEHAVNVLDLAGMEDAPGLYDTVTQQCRVVFTNKKRLVFTQAKHSAEVGLPKMNCLASLLTCFHDRWSRRKWTSYYASIKASEVLQVFVQQTLTTSYEAYTCTFTDFLDVLCCPTGGTLKSEKDINGVTQTLGDHDPGNCMTRWDKTRFMRHALVIRYLDCASHSVQETTLMALASTPASKLYEMARAIDTSITIKANNWLSHKNLPNPLAAQPFRNQTPPQALIKQKPYKVLVFILFAVSLIFFAFNPTAAVFMLIAVFTAVFGAYSGSKSPVRRARKAVGFGMFGSGSKTTVSTNAFGLGVYLLSFFLGIGST 450
            ++    G    A  AE+D+ YF T+ YPF   Q DR+RE LL                          V +DL+ WD+ECARKHLDAIKDSV T DDLH    M+GE  VN LDLAG+E+APG++D VTQ+CRVVFTNKKRL+FTQ                                          VLQVFVQQ LTTSY+  TCTF D LD LCCPTGGT+ SEK+I+GVTQTLGDHDPG+CM+RWDKTR MRHALVIRY+DCAS+SV+ETT MA  S PAS+LYEMAR+I+ +ITI+  +W+  K+LP  L A  F N  P   L K+K YK L+F+L  VSLIFFA NPTAAVFM ++V  A+FGAYSGSK+  +R R A G  +  + SK T+ +N  G GVY LSFFLG+ +T
Sbjct:   82 RMTAARGTAIGAPAAEVDEAYFFTDVYPFTAAQFDRERENLLGHHTGLDPKMAQIDPSSRKMLQMTSGVAADLEKWDIECARKHLDAIKDSVTTHDDLHQFTFMKGEKVVNALDLAGLEEAPGVFDEVTQRCRVVFTNKKRLIFTQ------------------------------------------VLQVFVQQKLTTSYQTSTCTFNDILDFLCCPTGGTMYSEKNIHGVTQTLGDHDPGDCMSRWDKTRHMRHALVIRYVDCASNSVKETTAMAHPSIPASQLYEMARSIEANITIRTADWMKCKSLPTALNAGSFNNSPPSPPLFKRKSYKGLMFLLLIVSLIFFAVNPTAAVFMFLSVLAALFGAYSGSKTQQKRVRNA-GSWILNAASKRTLGSNGAGAGVYALSFFLGLQNT 458          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig75.15670.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FWP8_ECTSI9.940e-22093.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KA59_9PHAE1.350e-13959.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH32_ECTSI1.090e-13052.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 365..382
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 383..387
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 388..405
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..364
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 406..466
NoneNo IPR availableTMHMMTMhelixcoord: 429..451
NoneNo IPR availableTMHMMTMhelixcoord: 369..403

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig75contigE-siliculosus-1a_M_contig75:655721..663400 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig75.15670.1mRNA_E-siliculosus-1a_M_contig75.15670.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig75 655721..663400 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig75.15670.1 ID=prot_E-siliculosus-1a_M_contig75.15670.1|Name=mRNA_E-siliculosus-1a_M_contig75.15670.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=467bp
MSSPAKKPQGKSSSGWRQPRAVLQPRPSVRQLKTEGVWLEPVLTASSPEA
RNCCEHKIEITAGMPPAANGAEIDKPYFHTEGYPFRGDQLDRQREALLVR
SDLQDWDVECARKHLDAIKDSVQTLDDLHDSALMEGEHAVNVLDLAGMED
APGLYDTVTQQCRVVFTNKKRLVFTQAKHSAEVGLPKMNCLASLLTCFHD
RWSRRKWTSYYASIKASEVLQVFVQQTLTTSYEAYTCTFTDFLDVLCCPT
GGTLKSEKDINGVTQTLGDHDPGNCMTRWDKTRFMRHALVIRYLDCASHS
VQETTLMALASTPASKLYEMARAIDTSITIKANNWLSHKNLPNPLAAQPF
RNQTPPQALIKQKPYKVLVFILFAVSLIFFAFNPTAAVFMLIAVFTAVFG
AYSGSKSPVRRARKAVGFGMFGSGSKTTVSTNAFGLGVYLLSFFLGIGST
GSGDPSGTGTGSSFGS*
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