prot_E-siliculosus-1a_M_contig75.15669.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig75.15669.1
Unique Nameprot_E-siliculosus-1a_M_contig75.15669.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length237
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig75.15669.1 vs. uniprot
Match: D7FWP7_ECTSI (Arrestin_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWP7_ECTSI)

HSP 1 Score: 316 bits (810), Expect = 8.440e-107
Identity = 191/238 (80.25%), Postives = 196/238 (82.35%), Query Frame = 0 
Query:    1 MGPIKLKVSILQHQYFAGSVVQGSVQVQVCTKNNKESSADELKLRLVGHVKTAV--STGKGEETEMAREDKEILSYDVQLGSFGGKAASGIHNFPFSVTLPAGLPPSMTVSPILTVGAGGTEVQPGRGSVVLAQAAPCPSAQTIPYPAGPTQTSPYLAPQTPQYSTGPYGSAQYSGPYGSSXTVXXXXXXXXXXXXXXEASLGYTPGIQCYPTHQAVAAVKVDENGRVIPRVVPHGGG 236
            MGPIKLKVS LQHQYFAGSVV+GSV+VQVCTKNNKESSADELKLRLVGHVKTAV  ST KGEET+MAREDKEILSYDVQLGSFGGKAASG+HNF FSVTLPAGLPPSMTVSPILTVGAGGTEVQPG GSVVLAQAAPCPS QT+PY         YLAP                      X  XXXXXXXXXXXXXX  SLGYTPGIQCYPTHQAVAAVKVDENGRVIPRVVPHGGG
Sbjct:    1 MGPIKLKVSTLQHQYFAGSVVKGSVEVQVCTKNNKESSADELKLRLVGHVKTAVDYSTDKGEETKMAREDKEILSYDVQLGSFGGKAASGVHNFLFSVTLPAGLPPSMTVSPILTVGAGGTEVQPGGGSVVLAQAAPCPSPQTMPYXXXXXXXXXYLAPXX---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLGYTPGIQCYPTHQAVAAVKVDENGRVIPRVVPHGGG 229
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig75.15669.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWP7_ECTSI8.440e-10780.25Arrestin_N domain-containing protein n=1 Tax=Ectoc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014752Arrestin, C-terminalGENE3D2.60.40.640coord: 4..115
e-value: 9.4E-13
score: 50.2
IPR011021Arrestin-like, N-terminalPFAMPF00339Arrestin_Ncoord: 14..107
e-value: 7.2E-6
score: 26.1
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 2..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig75contigE-siliculosus-1a_M_contig75:650301..652719 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig75.15669.1mRNA_E-siliculosus-1a_M_contig75.15669.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig75 650301..652719 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig75.15669.1 ID=prot_E-siliculosus-1a_M_contig75.15669.1|Name=mRNA_E-siliculosus-1a_M_contig75.15669.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=237bp
MGPIKLKVSILQHQYFAGSVVQGSVQVQVCTKNNKESSADELKLRLVGHV
KTAVSTGKGEETEMAREDKEILSYDVQLGSFGGKAASGIHNFPFSVTLPA
GLPPSMTVSPILTVGAGGTEVQPGRGSVVLAQAAPCPSAQTIPYPAGPTQ
TSPYLAPQTPQYSTGPYGSAQYSGPYGSSQTVPYPTPQGATYGAPPEASL
GYTPGIQCYPTHQAVAAVKVDENGRVIPRVVPHGGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014756Ig_E-set
IPR011021Arrestin-like_N
IPR014752Arrestin_C