prot_E-siliculosus-1a_M_contig75.15653.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig75.15653.1
Unique Nameprot_E-siliculosus-1a_M_contig75.15653.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length305
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig75.15653.1 vs. uniprot
Match: A0A6H5KMP8_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMP8_9PHAE)

HSP 1 Score: 359 bits (921), Expect = 1.070e-120
Identity = 264/307 (85.99%), Postives = 264/307 (85.99%), Query Frame = 0
Query:    1 MSRPPTMSQLLKRAGLAKRPRPASRGVDATPSTANQSN-KRQRVDGDGSRQHSXXXXXXXXXXGGSRSENGTSAKDVAVDDQIAALERELKGADDSSSXXXXXXXXXXXXXXXXXRGAGR-ERGRVAKLVSPLEAEKIEPLPAHLLPRPGCGVHKDKKKKKKPSAAVGATALPGPSQGLDSAVKELLANYEARSSERVPFYCRVCKFQGDSLEALEKHKEEPLHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKLQSTMSRQGKWVPGGRGGPGSEGSSNGYSGRENGGGHWRGSGARG 305
            M RPPTMSQLLKRAGLAKR RPA RGVDATPS ANQSN KRQRVDG       XXXXXXXXXX  SRSENG SAKDV VDDQIAALERELKGAD SSS        XXXXXXXXX      ERGR  KLVSPLEAEKIEPLPAHLLPRPGCGVHKD KKKKKPSAAVG TALPGPSQGLDSAVKELLANYEARSSERVPFYCRVCKFQGDSLEALEKHKEEPLHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    LEKLQS MSRQGKWVPGGRGGPGSEGS NGYSGRENGG  WRGSGARG
Sbjct:    1 MFRPPTMSQLLKRAGLAKRSRPAGRGVDATPSPANQSNNKRQRVDGXXXXXXXXXXXXXXXXXXXSRSENGASAKDVTVDDQIAALERELKGADVSSSDAESSISSXXXXXXXXXXXXXXXERGRATKLVSPLEAEKIEPLPAHLLPRPGCGVHKDNKKKKKPSAAVGTTALPGPSQGLDSAVKELLANYEARSSERVPFYCRVCKFQGDSLEALEKHKEEPLHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKAHLEKLQSMMSRQGKWVPGGRGGPGSEGSLNGYSGRENGGDCWRGSGARG 307          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15653.1 vs. uniprot
Match: D7FWN0_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWN0_ECTSI)

HSP 1 Score: 358 bits (918), Expect = 3.160e-120
Identity = 274/309 (88.67%), Postives = 277/309 (89.64%), Query Frame = 0
Query:    1 MSRPPTMSQLLKRAGLAKRPRPASRGVDATPSTANQSN-KRQRVDGDGSRQHSXXXXXXXXXXGG--SRSENGTSAKDVAVDDQIAALERELKGADDSSSXXXXXXXXXXXXXXXXXRGAGRERGRVAKLVSPLEAEKIEPLPAHLLPRPGCGVHKDKKKKKK-PSAAVGATALPGPSQGLDSAVKELLANYEARSSERVPFYCRVCKFQGDSLEALEKHKEEPLHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKLQSTMSRQGKWVPGGRGGPGSEGSSNGYSGRENGGGHWRGSGARG 305
            MS PPTMSQLLKRAGLAKRPRPA RGVDATPSTA+QS  KR RVD        XXXXXXXXXX     RSENGTSAKDVAVDDQIAALERELKGA+DSSS   XXXXXXXXXXXXXXRGAGRERGRVAKLVSPLE EKIEPLPAHLLPRPGCGVHKDKK     PSAAVG TALPGPSQGLDSAVKELLANYEARSSERVPFYCRVCKFQGDSLEALEKHKEEPLHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKLQSTMSRQGKWVPGG GGPGSE S+NGYSGRENGGG WRGS ARG
Sbjct:    1 MSGPPTMSQLLKRAGLAKRPRPAGRGVDATPSTASQSKRKRPRVDXXXXXXXXXXXXXXXXXXXXXXGRSENGTSAKDVAVDDQIAALERELKGANDSSSDAEXXXXXXXXXXXXXXRGAGRERGRVAKLVSPLEVEKIEPLPAHLLPRPGCGVHKDKKXXXXXPSAAVGTTALPGPSQGLDSAVKELLANYEARSSERVPFYCRVCKFQGDSLEALEKHKEEPLHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKLQSTMSRQGKWVPGGWGGPGSERSANGYSGRENGGGRWRGSDARG 309          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15653.1 vs. uniprot
Match: A0A835Z659_9STRA (C2H2-type domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z659_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.060e-12
Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = 0
Query:  176 GLDSAVKELLANYEARSSERVPFYCRVCKFQGDSLEALEKHKEEPLHV 223
            GL+ AV ELLANYEA+S+ER+P+YCRVCKFQG S+E L  H++  LH 
Sbjct:    2 GLEGAVNELLANYEAKSAERIPYYCRVCKFQGASVEDLAAHRQTQLHT 49          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15653.1 vs. uniprot
Match: I2CRP9_NANGC (C2h2 zinc finger protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRP9_NANGC)

HSP 1 Score: 64.3 bits (155), Expect = 1.230e-9
Identity = 29/47 (61.70%), Postives = 34/47 (72.34%), Query Frame = 0
Query:  176 GLDSAVKELLANYEARSSERVPFYCRVCKFQGDSLEALEKHKEEPLH 222
            GL   V ELL+NY+  SSER PFYCR+C+FQG SLE L  HK+  LH
Sbjct:    2 GLAQTVAELLSNYQPASSERRPFYCRICRFQGQSLEDLAHHKKGELH 48          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15653.1 vs. uniprot
Match: W7TIZ9_9STRA (C2h2 zinc finger n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIZ9_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 3.980e-9
Identity = 29/47 (61.70%), Postives = 34/47 (72.34%), Query Frame = 0
Query:  176 GLDSAVKELLANYEARSSERVPFYCRVCKFQGDSLEALEKHKEEPLH 222
            GL   V ELL+NY+  SSER PFYCR+C+FQG SLE L  HK+  LH
Sbjct:   33 GLAQTVAELLSNYQPASSERRPFYCRICRFQGQSLEDLAHHKKGELH 79          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15653.1 vs. uniprot
Match: A0A4D9D0V7_9STRA (C2H2-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0V7_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 3.140e-8
Identity = 29/47 (61.70%), Postives = 34/47 (72.34%), Query Frame = 0
Query:  176 GLDSAVKELLANYEARSSERVPFYCRVCKFQGDSLEALEKHKEEPLH 222
            GL   V ELL+NY+  SSER PFYCR+C+FQG SLE L  HK+  LH
Sbjct:  168 GLAQTVAELLSNYQPASSERRPFYCRICRFQGQSLEDLAHHKKGELH 214          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15653.1 vs. uniprot
Match: B7FRV3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FRV3_PHATC)

HSP 1 Score: 62.4 bits (150), Expect = 1.320e-7
Identity = 52/159 (32.70%), Postives = 70/159 (44.03%), Query Frame = 0
Query:   78 VDDQIAALERELKGADDSSSXXXXXXXXXXXXXXXXXRGAGRERGRVAKLVSPLEAEKIEPLPAHLLP----RPGCGVHK---------DKKKKKKPSAAVGATALPGPSQGLDSAVKELLANYEARSSERVPFYCRVCKFQGDSLEALEKHKEEPLHV 223
            +D++I  LE EL    D                          RG V  L S ++ ++IEPLP++LLP    R   G+ +         D+  KKK             S GL++AVKE+L  Y  RSSER+PFYCRVC  Q    ++   HKE   H 
Sbjct:   49 IDEEIRRLEAELANESDEDEHDSSDVETNSETEDD-------SRGTVLCLSS-VQKDRIEPLPSNLLPSNRKRSLKGIDRVNASERDDADQSNKKKSKLV---------SSGLEAAVKEVLDGYVPRSSERLPFYCRVCAQQMSDEDSFTAHKETEFHT 190          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15653.1 vs. uniprot
Match: A0A1E7F3F2_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F3F2_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 8.370e-6
Identity = 61/145 (42.07%), Postives = 76/145 (52.41%), Query Frame = 0
Query:   78 VDDQIAALERELKGADDSSSXXXXXXXXXXXXXXXXXRGAGRERGRVAKLVSPLEAEKIEPLPAHLLPRPGCGVHKDKKKKKKPSAAVGATALPGPSQGLDSAVKELLANYEARSSERVPFYCRVCKFQGDSLEALEKHKEEPLH 222
            VDD+I  LEREL    D   XXXXXXXXXXXXXXXXX             +S    +++E L +  LP PG      K K  K SA           +GL+  V+E+L  Y ARSSE++PFYCR C  Q ++ E   +HK    H
Sbjct:  113 VDDEIERLERELMNGSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAILSLSEFADDRVESLASACLPVPGRYDAMKKIKNPKKSAEK---------RGLEMKVQEILGGYTARSSEKLPFYCRFCSKQYENKEDFYEHKNFEFH 248          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig75.15653.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KMP8_9PHAE1.070e-12085.99C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FWN0_ECTSI3.160e-12088.67C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
A0A835Z659_9STRA1.060e-1264.58C2H2-type domain-containing protein (Fragment) n=1... [more]
I2CRP9_NANGC1.230e-961.70C2h2 zinc finger protein (Fragment) n=1 Tax=Nannoc... [more]
W7TIZ9_9STRA3.980e-961.70C2h2 zinc finger n=1 Tax=Nannochloropsis gaditana ... [more]
A0A4D9D0V7_9STRA3.140e-861.70C2H2-type domain-containing protein n=1 Tax=Nannoc... [more]
B7FRV3_PHATC1.320e-732.70Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A1E7F3F2_9STRA8.370e-642.07Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 82..102
NoneNo IPR availablePFAMPF12874zf-metcoord: 235..257
e-value: 1.0E-7
score: 32.1
NoneNo IPR availableGENE3D3.30.160.60coord: 219..272
e-value: 2.5E-9
score: 38.5
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 233..257
e-value: 0.049
score: 22.8
coord: 198..222
e-value: 7.2
score: 14.6
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 235..257
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 233..262
score: 8.58
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 226..264

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig75contigE-siliculosus-1a_M_contig75:552068..554617 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig75.15653.1mRNA_E-siliculosus-1a_M_contig75.15653.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig75 552068..554716 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig75.15653.1 ID=prot_E-siliculosus-1a_M_contig75.15653.1|Name=mRNA_E-siliculosus-1a_M_contig75.15653.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=305bp
MSRPPTMSQLLKRAGLAKRPRPASRGVDATPSTANQSNKRQRVDGDGSRQ
HSSEEEEEEEEEGGSRSENGTSAKDVAVDDQIAALERELKGADDSSSDAE
SSSGDDDSASSKEDRGAGRERGRVAKLVSPLEAEKIEPLPAHLLPRPGCG
VHKDKKKKKKPSAAVGATALPGPSQGLDSAVKELLANYEARSSERVPFYC
RVCKFQGDSLEALEKHKEEPLHVEAAKKERKISKCSLCKKQFTSPPQLQE
HLAGKAHLEKLQSTMSRQGKWVPGGRGGPGSEGSSNGYSGRENGGGHWRG
SGARG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR013087Znf_C2H2_type