prot_E-siliculosus-1a_M_contig75.15618.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig75.15618.1
Unique Nameprot_E-siliculosus-1a_M_contig75.15618.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length217
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig75.15618.1 vs. uniprot
Match: A0A6H5JBE3_9PHAE (PSII_Pbs31 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JBE3_9PHAE)

HSP 1 Score: 335 bits (859), Expect = 3.670e-115
Identity = 186/191 (97.38%), Postives = 190/191 (99.48%), Query Frame = 0
Query:    1 MKTACVALALLGSSSAFVVPMANVRTTSSSSTSLAMSSEPMTRSQALSNLFGATAAVAAAAAVPGVAFADGAKSLATQSRARGIYGNRIAALKGAVDKGDTAAILAEQNCFRLFNSGVYSTDKAKFAEAESLAKSVVQAAGAGDAKALKDSYAAYVKYTEKKSGFNGAGDGQGFGSEFDYKNRTPLGTVYQ 191
            MKTACVALALLGSSSAFVVPMANVRTTSSSSTSLAMSSEPMTRSQALSNLFGATAAVAAAAAVPGVAFADGAKS ATQ+RARGIYGNRIAALKGAVDKGDTAAILAEQNCFRLFNSGVYSTDKAKFAEAE+LAKSVVQAAGAGDAKALKDSYAAY+KYTEKKSG+NGAGDGQGFGSEFDYKNRTPLGTVYQ
Sbjct:    1 MKTACVALALLGSSSAFVVPMANVRTTSSSSTSLAMSSEPMTRSQALSNLFGATAAVAAAAAVPGVAFADGAKSPATQARARGIYGNRIAALKGAVDKGDTAAILAEQNCFRLFNSGVYSTDKAKFAEAEALAKSVVQAAGAGDAKALKDSYAAYMKYTEKKSGYNGAGDGQGFGSEFDYKNRTPLGTVYQ 191          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15618.1 vs. uniprot
Match: B8CC14_THAPS (PSII_Pbs31 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CC14_THAPS)

HSP 1 Score: 111 bits (277), Expect = 3.580e-27
Identity = 72/142 (50.70%), Postives = 92/142 (64.79%), Query Frame = 0
Query:   53 ATAAVAAAAAV----PGVAFADGAKSLATQSRARGIYGNRIAALKGAVDKGDTAAILAEQNCFRLFNSGVYSTDKAKFAEAESLAKSVVQAAGAGDAKALKDSYAAYVKYTEKKSGFNGAGDGQGFGSEFDYKNRTPLGTVY 190
            ATA +A +AAV    P +A ADGAKS ATQSRARGIYG RIAAL+ AV+ GD  A+ AE+N F LFNSG  + DK+K +EA     ++  A  A DA ALK +YA Y    + K        GQG+ +++D+K RT LGT+Y
Sbjct:   34 ATAQIATSAAVLAGLPSLALADGAKSAATQSRARGIYGQRIAALESAVNAGDFGAVAAEKNAFILFNSGAIA-DKSKKSEAVKQTNAIFAAIRAKDAGALKSAYATYKGANDIKVIVADKESGQGYSNDYDFKARTTLGTIY 174          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15618.1 vs. uniprot
Match: A0A1Z5JRZ4_FISSO (PSII_Pbs31 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JRZ4_FISSO)

HSP 1 Score: 104 bits (260), Expect = 1.500e-24
Identity = 82/193 (42.49%), Postives = 112/193 (58.03%), Query Frame = 0
Query:    1 MKTACVALALLGSSSAFVVPMANVRTTSSSSTSLAMSSEPMTRSQALSNLFGATAAVAAAAAVPGVAFADGAKSLATQSRARGIYGNRIAALKGAVDKGDTAAILAEQNCFRLFNSGVYSTDKAKFAEAESL--AKSVVQAAGAGDAKALKDSYAAYVKYTE-KKSGFNGAGDGQGFGSEFDYKNRTPLGTVY 190
            MK + +  AL  +S+A   P  + R    +STSL      + R  A   + GA AAVAA    P +A ADGA S AT +RARGIYG+RIAALK AV+KGD  AI+AE+N F LFNSG Y T K+K  +  ++    ++ +A  AGD  A+K +Y +YV   +        A  GQG+  +FD++ RT  G +Y
Sbjct:    1 MKFSALVCALAATSAAAFAPAVSER----ASTSL----NSVDRRAAFGQIAGAAAAVAA---FPQLANADGAVSAATVNRARGIYGDRIAALKSAVEKGDLDAIVAEKNAFVLFNSGAYPTAKSKQQKKAAIEGTNAIFKAIKAGDKAAVKSAYNSYVAANDISPLPAVDANKGQGYSGDFDFRVRTKAGAIY 182          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15618.1 vs. uniprot
Match: A0A835ZH21_9STRA (Extrinsic protein in photosystem II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH21_9STRA)

HSP 1 Score: 104 bits (259), Expect = 2.330e-24
Identity = 74/186 (39.78%), Postives = 111/186 (59.68%), Query Frame = 0
Query:    8 LALLGSSSAFV--VPMANVRTTSSSSTSLAMSSEPMTRSQALSNLFGATAAVAAAAAVPGVAFADGAKSLATQSRARGIYGNRIAALKGAVDKGDTAAILAEQNCFRLFNSGVYS-TDKAKFAEAESLAKSVVQAAGAGDAKALKDSYAAYVKYTEKKSGFNGAGDGQGFGSEFDYKNRTPLGTVY 190
            L L  S+SAF+   P+A VR    SS+++ MS+ P +R   L  +F  TAA  AA A+P +AFADGA S AT  RA+GIYG+++ +L GAV  G+  A+ AE+N   L  SG +  + KA   +A++L  ++  A    +A AL+ +Y   +K  +  +     GD QG+ S++D+K RT  GT+Y
Sbjct:    7 LCLAASASAFMPAAPLAGVR----SSSAMTMSAAPESRRAVLQTVF--TAAAVAAVAIPELAFADGAVSEATVQRAKGIYGDKVLSLAGAVKAGNFEAVAAEKNAITLLASGGFGMSSKADKKQAQALKNAIFAAIDTKNAAALQSAYGDLIKLAKIPASTGSGGDTQGYSSDYDWKARTAKGTIY 186          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15618.1 vs. uniprot
Match: A0A836CPF3_9STRA (Extrinsic protein in photosystem II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPF3_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.760e-23
Identity = 76/193 (39.38%), Postives = 111/193 (57.51%), Query Frame = 0
Query:    1 MKTACVALALLGSSSAFV--VPMANVRTTSSSSTSLAMSSEPMTRSQALSNLFGATAAVAAAAAVPGVAFADGAKSLATQSRARGIYGNRIAALKGAVDKGDTAAILAEQNCFRLFNSGVYS-TDKAKFAEAESLAKSVVQAAGAGDAKALKDSYAAYVKYTEKKSGFNGAGDGQGFGSEFDYKNRTPLGTVY 190
            MK AC  +AL+GS++AF    P   VR     S+++ MS+ P +R + L     A +A AAAA  P +AFADGA S +T  RA+GIYG+++  L GAV  G+  A+ AE     L  SG ++   KA  A A++   ++  A  + DA  L+ +YA  VK  +  +   G GD QG+ S++D+K RT  GT+Y
Sbjct:    1 MKAACAVVALVGSAAAFAPAAPAVAVR-----SSAMTMSAAPESRREVLRT---AVSAAAAAAVFPQLAFADGAVSESTVQRAKGIYGDKVLNLAGAVKAGNFEAVKAESGAISLLTSGGFARASKADKAAAKAAKDAIFAAVESKDAAKLQSAYADLVKLAKIPASTAGGGDTQGYSSDYDWKARTAKGTIY 185          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15618.1 vs. uniprot
Match: A0A6S8V106_9STRA (Hypothetical protein n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8V106_9STRA)

HSP 1 Score: 101 bits (252), Expect = 2.240e-23
Identity = 66/143 (46.15%), Postives = 88/143 (61.54%), Query Frame = 0
Query:   55 AAVAAAAAVPGVAFADGAKSLATQSRARGIYGNRIAALKGAVDKGDTAAILAEQNCFRLFNSGVYSTDKAKFAEAESL--AKSVVQAAGAGDAKALKDSYAAYVKYTEKKSGFN-----GAGDGQGFGSEFDYKNRTPLGTVY 190
            AA AA A+VP +A ADGA S AT  RARGIYGNR+AAL+GAV  GD  A+ AE+N F LFNSG Y   K K A+A ++    ++  A  + DA  LK +Y +Y+      +G N      A  GQG+ S++DY+ R+  G +Y
Sbjct:   43 AAAAALASVPAIANADGAVSSATVGRARGIYGNRVAALEGAVASGDFGAVAAEKNAFILFNSGAYPGAKNKVAKAAAIEGTNAIFSAIRSKDAAGLKSAYGSYIA----ANGINPLPAVDANSGQGYCSDYDYRVRSSAGAIY 181          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15618.1 vs. uniprot
Match: B6ZHE7_9STRA (Extrinsic protein in photosystem II n=1 Tax=Chaetoceros gracilis TaxID=184592 RepID=B6ZHE7_9STRA)

HSP 1 Score: 101 bits (251), Expect = 2.850e-23
Identity = 62/131 (47.33%), Postives = 83/131 (63.36%), Query Frame = 0
Query:   61 AAVPGVAFADGAKSLATQSRARGIYGNRIAALKGAVDKGDTAAILAEQNCFRLFNSGVYSTDKAKFAEAESLAKSVVQAAGAGDAKALKDSYAAYVKYTE-KKSGFNGAGDGQGFGSEFDYKNRTPLGTVY 190
            A +P +A ADGA S AT +RARG+YG+RIAALK AV  GD  AI  E+N F LFNSG Y T+KAK   A +    + +A  +GD  A+K +Y AY+   E +      +  GQG+ SEFD+++RT  G +Y
Sbjct:   47 AGIPSIASADGAVSSATINRARGLYGDRIAALKDAVAAGDFKAIAEEKNAFILFNSGAYPTNKAKKNAAIAQTNEIFKAIRSGDKAAVKSAYDAYMAANEIRPLPEINSNVGQGYSSEFDFRSRTKAGAIY 177          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15618.1 vs. uniprot
Match: A0A7S2KTS3_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KTS3_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 6.150e-22
Identity = 62/130 (47.69%), Postives = 80/130 (61.54%), Query Frame = 0
Query:   61 AAVPGVAFADGAKSLATQSRARGIYGNRIAALKGAVDKGDTAAILAEQNCFRLFNSGVYSTDKAKFAEAESLAKSVVQAAGAGDAKALKDSYAAYVKYTEKKSGFNGAGDGQGFGSEFDYKNRTPLGTVY 190
            A +P +A ADGA+S  T  RARGIYG RIA L+GAV+ GD  A+ +E+N F LFNSG   TDKAK A+A +   ++  A  A DA ALK +Y  Y    E         +GQG+ S+ D+K RTP G +Y
Sbjct:   49 AGLPQLALADGARSAVTVQRARGIYGQRIAGLEGAVNAGDFGAVASEKNAFILFNSGGI-TDKAKKAQAVAGTNAIFAAIRAKDAGALKKAYGDYKSANEISVITVDMTNGQGYSSDADWKTRTPAGAIY 177          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15618.1 vs. uniprot
Match: A0A7S2C001_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C001_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.500e-21
Identity = 80/197 (40.61%), Postives = 115/197 (58.38%), Query Frame = 0
Query:    1 MKTACVALALLGSSSAFVVPMANVRTTSSSSTSLAMSSEPMTRSQALSNLFGATAAVAAAAAVPGVAFADGAKSLATQSRARGIYGNRIAALKGAVDKGDTAAILAEQNCFRLFNSGVYSTDKAKFAEAESL----AKSVVQAAGAGDAKALKDSYAAYVKYTEKKS-GFNG--AGDGQGFGSEFDYKNRTPLGTVY 190
            M++  VALALL S+SAF   +   R+T      ++MS+E + R   ++   G    V A A     A ADGA SLAT +R+RGIYG R+A L GAV+KGD  A+LAE+N F LFN+   S ++ K  E + +     ++V+ AA  GD  ALK +YA Y+K     +  + G  A   QG+ +++D+K RT  GT+Y
Sbjct:   16 MRSFIVALALLASASAFSPTILRARST------VSMSAENVDRRGMITKTAGVLGGVFAGAQA---ANADGAVSLATMARSRGIYGTRVADLAGAVEKGDFEAVLAEKNAFVLFNN---SNNRPKNKEEKKINAVKQEAVLAAAAKGDKAALKAAYADYIKTASLPNPAYKGRDADYSQGYSNDYDWKARTNRGTIY 200          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15618.1 vs. uniprot
Match: K0R4S8_THAOC (PSII_Pbs31 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R4S8_THAOC)

HSP 1 Score: 97.8 bits (242), Expect = 3.820e-21
Identity = 64/136 (47.06%), Postives = 80/136 (58.82%), Query Frame = 0
Query:   55 AAVAAAAAVPGVAFADGAKSLATQSRARGIYGNRIAALKGAVDKGDTAAILAEQNCFRLFNSGVYSTDKAKFAEAESLAKSVVQAAGAGDAKALKDSYAAYVKYTEKKSGFNGAGDGQGFGSEFDYKNRTPLGTVY 190
            A  A  A +P +A ADGAKS AT SRARGIYG RIAAL+ AV KGD  A+ AE+N F L+NSG   T K K A A     ++  A    DA ALK +Y  Y    +          GQG+ +++D+K RT LGT+Y
Sbjct:   41 AGAAVIAGLPNLALADGAKSAATVSRARGIYGQRIAALEDAVSKGDFGAVAAEKNAFILYNSGAI-TSKDKQAAAVKQTNAIFAAIRGKDAGALKKAYGDYKSAQDIAVIVVDKEKGQGYSNDYDFKTRTNLGTIY 175          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig75.15618.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6H5JBE3_9PHAE3.670e-11597.38PSII_Pbs31 domain-containing protein n=2 Tax=Ectoc... [more]
B8CC14_THAPS3.580e-2750.70PSII_Pbs31 domain-containing protein n=1 Tax=Thala... [more]
A0A1Z5JRZ4_FISSO1.500e-2442.49PSII_Pbs31 domain-containing protein n=2 Tax=Fistu... [more]
A0A835ZH21_9STRA2.330e-2439.78Extrinsic protein in photosystem II n=1 Tax=Tribon... [more]
A0A836CPF3_9STRA1.760e-2339.38Extrinsic protein in photosystem II n=1 Tax=Tribon... [more]
A0A6S8V106_9STRA2.240e-2346.15Hypothetical protein n=6 Tax=Ditylum brightwellii ... [more]
B6ZHE7_9STRA2.850e-2347.33Extrinsic protein in photosystem II n=1 Tax=Chaeto... [more]
A0A7S2KTS3_9STRA6.150e-2247.69Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2C001_9STRA1.500e-2140.61Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
K0R4S8_THAOC3.820e-2147.06PSII_Pbs31 domain-containing protein n=1 Tax=Thala... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040933Photosystem II Psb31 proteinPFAMPF18240PSII_Pbs31coord: 72..162
e-value: 7.5E-37
score: 125.6
NoneNo IPR availableGENE3D1.20.120.1740coord: 70..192
e-value: 8.0E-45
score: 154.2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..216
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..16
score: 0.653
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableTMHMMTMhelixcoord: 47..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig75contigE-siliculosus-1a_M_contig75:183074..186511 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig75.15618.1mRNA_E-siliculosus-1a_M_contig75.15618.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig75 183074..186969 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig75.15618.1 ID=prot_E-siliculosus-1a_M_contig75.15618.1|Name=mRNA_E-siliculosus-1a_M_contig75.15618.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=217bp
MKTACVALALLGSSSAFVVPMANVRTTSSSSTSLAMSSEPMTRSQALSNL
FGATAAVAAAAAVPGVAFADGAKSLATQSRARGIYGNRIAALKGAVDKGD
TAAILAEQNCFRLFNSGVYSTDKAKFAEAESLAKSVVQAAGAGDAKALKD
SYAAYVKYTEKKSGFNGAGDGQGFGSEFDYKNRTPLGTVYQVGAVRCARQ
CTFVSNRTQLVIARWN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040933PSII_Pbs31