prot_E-siliculosus-1a_M_contig75.15598.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig75.15598.1
Unique Nameprot_E-siliculosus-1a_M_contig75.15598.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length281
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig75.15598.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 395 bits (1014), Expect = 3.000e-137
Identity = 198/220 (90.00%), Postives = 209/220 (95.00%), Query Frame = 0
Query:   61 MVASQMFIGTAATLIASSTAFVAPMAVRSVATTPSSSSLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 280
            MVA+Q+F+G+AATLIASSTAFVAPMAVRS A   SSS+LKMSAGSDYVATLPGAPF DGKIFDPL LSDGA P DIKKWREAEIKHGRVAMLASLGV+VAEQYHP FMGPDYIGPAVDHFQEISAQ+PEFW FSLLGMAFIEYNTIMTAF+TPSAVTGEGGLKEDY+PGDLGFDPLNLKP+DEAALDVMKTKELNNGRLAMIGIAGML QEL+NPADILG
Sbjct:    1 MVATQLFLGSAATLIASSTAFVAPMAVRSAAPASSSSALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15598.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 387 bits (993), Expect = 5.450e-134
Identity = 197/219 (89.95%), Postives = 207/219 (94.52%), Query Frame = 0
Query:   61 MVASQMFIGTAATLIASSTAFVAPMAVRSVATTPSSSSLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADIL 279
            MVASQMF+GTAA LIASSTAFVAP+AVRS A   ++S+LKMSAGSDYVATLPGAPFSDGKIFDPL LSDGAAPGDIKKWREAEIKHGRVAMLASLG++VAE+YHP FMG D+IGPA+ HFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPD EAALDVMKTKELNNGRLAMIGIAGMLAQELVN  DIL
Sbjct:    1 MVASQMFLGTAAALIASSTAFVAPVAVRSAAPASAASALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15598.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 364 bits (934), Expect = 4.700e-125
Identity = 184/220 (83.64%), Postives = 199/220 (90.45%), Query Frame = 0
Query:   61 MVASQMFIGTAATLIASSTAFVAPMAVRSVATTPSSSSLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 280
            + +S MF+GTAATLIASSTAFVAPMAVRS A   S+S+LKMSAGSDYVATLPGAPF DGKIFDPL LSDGA PG+IK WREAEIKHGRVAMLA++GVIVAEQYHP FMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTI  A+  PS VTGEGGL+++Y PGDLGFDPLNLKP D+A L+ M+TKELNNGRLAMIGIAGML QELVNPADILG
Sbjct:    2 VASSNMFLGTAATLIASSTAFVAPMAVRSAAPASSASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15598.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 347 bits (890), Expect = 8.390e-119
Identity = 188/220 (85.45%), Postives = 189/220 (85.91%), Query Frame = 0
Query:   61 MVASQMFIGTAATLIASSTAFVAPMAVRSVATTPSSSSLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 280
            MVASQMFIGTAATLIASSTAFVAPMAVRSV TTPSS  LKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE                            FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDY+PGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG
Sbjct:    1 MVASQMFIGTAATLIASSTAFVAPMAVRSVTTTPSSPGLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15598.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 349 bits (896), Expect = 9.710e-117
Identity = 217/392 (55.36%), Postives = 219/392 (55.87%), Query Frame = 0
Query:   61 MVASQMFIGTAATLIASSTAFVAPMAVRSVA-TTPSSSSLKMSAGSDYVATLPGAPFSDGK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------IFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 280
            MVASQMFIGTAATLIASSTAFVAP+AVRSVA TTPSSSSL MSAGSDYVATLPGAPFSDGK                                                                                                                                                                           IFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDY+PGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG
Sbjct:    1 MVASQMFIGTAATLIASSTAFVAPVAVRSVAITTPSSSSLMMSAGSDYVATLPGAPFSDGKQSFPSRLMKSIKFINNEYPIHDGEIGNGQMNFSRCHICVRSYPLGQIVSPVAVFDHRCPNALVPQIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQSFPSRLMKSIKFINNEYPIHDGEIGNGQMNFSRCHICVRSYPLGQIVSPVAVFDHRCPNALVPQIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15598.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 327 bits (839), Expect = 5.560e-111
Identity = 159/161 (98.76%), Postives = 161/161 (100.00%), Query Frame = 0
Query:  120 KIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 280
            +IFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAF+EYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG
Sbjct:   36 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15598.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 323 bits (829), Expect = 3.980e-109
Identity = 164/218 (75.23%), Postives = 188/218 (86.24%), Query Frame = 0
Query:   63 ASQMFIGTAATLIASSTAFVAPMAVRSVATTPSSSSLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 280
            +S MF+GTAATLIASS AFV PMAVRS A   S+S+LKMSAG+DY+ATLPGA   +GKIFD L L+DGA PG+IK WREAEIKHGRVAMLA++GV+VAEQYHPFFMGPDYIGPAVDHFQEI+A+FP+FWA+SLLGMAFIEYNTI  A+  PS VTGEGGL+++Y PGDLGFDP  +KP D+A L+ M+ KELNNGRLAMIGI GML QELVN  DILG
Sbjct:    4 SSNMFLGTAATLIASSAAFVTPMAVRSAAPASSASALKMSAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15598.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 271 bits (694), Expect = 3.290e-89
Identity = 130/160 (81.25%), Postives = 143/160 (89.38%), Query Frame = 0
Query:  120 KIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADIL 279
            KIFDPLGL+DGA  GDIK WREAEIKHGRVAMLASLGV+VAE+YHPFFMGPDYIGPAVDHFQEISA+FPEFWAFSLL +A IEYNTI  A+  PS VTGEGGL+++Y PGDLGFDPLNLKP D+ AL+ M+TKELNNGRLAMIGIAG L QELVNP +IL
Sbjct:   15 KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15598.1 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 273 bits (699), Expect = 1.310e-88
Identity = 134/213 (62.91%), Postives = 169/213 (79.34%), Query Frame = 0
Query:   68 IGTAATLIASSTAFVAPMAVRSVATTPSSSSLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 280
            +G A+   AS  AF+ P    +++  P+S++ +MSAGSDYV+TLPGAPF+DGK++DP+GLS  A P DIKKWREAEIKHGRVAMLAS+GV+VAE +HP F+GPDYIGPA+ HF+EI+A+FP+FWA +LL +A++EY  I   F     VTGEGG++ DY+PGDLGFDPL L P+DE  L+VMKTKELN+GRLAMIGI GM+ QELV P  I G
Sbjct:   60 VGMASWCFASCEAFIVPTPT-TLSARPTSTAARMSAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15598.1 vs. uniprot
Match: A0A6H5JYI8_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYI8_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 1.820e-86
Identity = 152/220 (69.09%), Postives = 155/220 (70.45%), Query Frame = 0
Query:   61 MVASQMFIGTAATLIASSTAFVAPMAVRSVATTPSSSSLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 280
            MVASQMFIGTAATLIASSTAFV PMA+RSVA+TPSSS  KMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE                                                              EDY+PGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG
Sbjct:    1 MVASQMFIGTAATLIASSTAFVGPMAMRSVASTPSSSGFKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE--------------------------------------------------------------EDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 158          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig75.15598.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7Q6_ECTSI3.000e-13790.00Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7Q9_ECTSI5.450e-13489.95Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S1_ECTSI4.700e-12583.64Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5K8D0_9PHAE8.390e-11985.45LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A6H5JWB4_9PHAE9.710e-11755.36LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G7S5_ECTSI5.560e-11198.76Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7S0_ECTSI3.980e-10975.23Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q7_ECTSI3.290e-8981.25Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G5B4_ECTSI1.310e-8862.91Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5JYI8_9PHAE1.820e-8669.09LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 111..271
e-value: 2.4E-37
score: 128.9
IPR023329Chlorophyll a/b binding domain superfamilyGENE3D1.10.3460.10coord: 104..279
e-value: 2.0E-36
score: 127.5
NoneNo IPR availablePANTHERPTHR21649:SF63coord: 70..274
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..87
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 88..280
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..65
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 118..279
IPR001344Chlorophyll A-B binding protein, plantPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 70..274

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig75contigE-siliculosus-1a_M_contig75:27789..29908 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig75.15598.1mRNA_E-siliculosus-1a_M_contig75.15598.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig75 26922..30052 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig75.15598.1 ID=prot_E-siliculosus-1a_M_contig75.15598.1|Name=mRNA_E-siliculosus-1a_M_contig75.15598.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=281bp
MQTMRTCENFARHNMFWLTSHNLAASSQTHASPHPPTTATRPHPTFEQPI
PQHTLHLPSKMVASQMFIGTAATLIASSTAFVAPMAVRSVATTPSSSSLK
MSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVA
MLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAF
IEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMK
TKELNNGRLAMIGIAGMLAQELVNPADILG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001344Chloro_AB-bd_pln
IPR023329Chlorophyll_a/b-bd_dom_sf
IPR022796Chloroa_b-bind