prot_E-siliculosus-1a_M_contig75.15594.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig75.15594.1
Unique Name	prot_E-siliculosus-1a_M_contig75.15594.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	270

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig75.15594.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 419 bits (1077), Expect = 5.110e-147
Identity = 218/224 (97.32%), Postives = 219/224 (97.77%), Query Frame = 0

Query:   46 MVASPNMFLGTAATLIASSTAFVAPMAVRSAAPASSASFASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMALIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 269
            MVAS NMFLGTAATLIASSTAFVAPMAVRSAAPASSAS   ALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQ+PEFWAFSLLGMA IEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG
Sbjct:    1 MVASSNMFLGTAATLIASSTAFVAPMAVRSAAPASSAS---ALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221

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BLAST of mRNA_E-siliculosus-1a_M_contig75.15594.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 368 bits (945), Expect = 5.850e-127
Identity = 192/224 (85.71%), Postives = 204/224 (91.07%), Query Frame = 0

Query:   46 MVASPNMFLGTAATLIASSTAFVAPMAVRSAAPASSASFASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMALIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 269
            M AS NMFLGTAATLIASS AFV PMAVRSAAPASSAS   ALKMSAG+DY+ATLPGA   +GKIFD LEL+DGA+PGEIKLWREAEIKHGRVAMLATVGV+VAEQYHP FMGPDYIGPAVDHFQEI+A++P+FWA+SLLGMA IEYNTI KAYAEPSPVTGEGGLRDEYSPGDLGFDP  +KPKDQAGLEKMQ KELNNGRLAMIGI GMLVQELVN  DILG
Sbjct:    1 MAASSNMFLGTAATLIASSAAFVTPMAVRSAAPASSAS---ALKMSAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218

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BLAST of mRNA_E-siliculosus-1a_M_contig75.15594.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 365 bits (936), Expect = 1.470e-125
Identity = 188/224 (83.93%), Postives = 206/224 (91.96%), Query Frame = 0

Query:   46 MVASPNMFLGTAATLIASSTAFVAPMAVRSAAPASSASFASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMALIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 269
            MVA+  +FLG+AATLIASSTAFVAPMAVRSAAPASS+S   ALKMSAGSDYVATLPGAPFGDGKIFDPL LSDGA+P +IK WREAEIKHGRVAMLA++GV+VAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFW FSLLGMA IEYNTI  A+  PS VTGEGGL+++Y PGDLGFDPLNLKP+D+A L+ M+TKELNNGRLAMIGIAGMLVQEL+NPADILG
Sbjct:    1 MVAT-QLFLGSAATLIASSTAFVAPMAVRSAAPASSSS---ALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220

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BLAST of mRNA_E-siliculosus-1a_M_contig75.15594.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 341 bits (875), Expect = 3.260e-116
Identity = 179/223 (80.27%), Postives = 197/223 (88.34%), Query Frame = 0

Query:   46 MVASPNMFLGTAATLIASSTAFVAPMAVRSAAPASSASFASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMALIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADIL 268
            MVAS  MFLGTAA LIASSTAFVAP+AVRSAAPAS+AS   ALKMSAGSDYVATLPGAPF DGKIFDPL LSDGA PG+IK WREAEIKHGRVAMLA++G++VAE+YHPLFMG D+IGPA+ HFQEISAQ+PEFWAFSLLGMA IEYNTI  A+  PS VTGEGGL+++Y PGDLGFDPLNLKP  +A L+ M+TKELNNGRLAMIGIAGML QELVN  DIL
Sbjct:    1 MVAS-QMFLGTAAALIASSTAFVAPVAVRSAAPASAAS---ALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219

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BLAST of mRNA_E-siliculosus-1a_M_contig75.15594.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 288 bits (738), Expect = 4.530e-96
Identity = 139/160 (86.88%), Postives = 149/160 (93.12%), Query Frame = 0

Query:  109 KIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMALIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADIL 268
            KIFDPL L+DGAE G+IKLWREAEIKHGRVAMLA++GV+VAE+YHP FMGPDYIGPAVDHFQEISA++PEFWAFSLL +ALIEYNTITKAYAEPS VTGEGGLRDEYSPGDLGFDPLNLKP DQ  LE MQTKELNNGRLAMIGIAG LVQELVNP +IL
Sbjct:   15 KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174

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BLAST of mRNA_E-siliculosus-1a_M_contig75.15594.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 280 bits (716), Expect = 1.850e-92
Identity = 133/161 (82.61%), Postives = 146/161 (90.68%), Query Frame = 0

Query:  109 KIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMALIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 269
            +IFDPL LSDGA PG+IK WREAEIKHGRVAMLA++GVIVAEQYHP FMGPDYIGPAVDHFQEISAQ+PEFWAFSLLGMA +EYNTI  A+  PS VTGEGGL+++Y PGDLGFDPLNLKP D+A L+ M+TKELNNGRLAMIGIAGML QELVNPADILG
Sbjct:   36 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196

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BLAST of mRNA_E-siliculosus-1a_M_contig75.15594.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 277 bits (708), Expect = 2.660e-91
Identity = 157/224 (70.09%), Postives = 169/224 (75.45%), Query Frame = 0

Query:   46 MVASPNMFLGTAATLIASSTAFVAPMAVRSAAPASSASFASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMALIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 269
            MVAS  MF+GTAATLIASSTAFVAPMAVRS     S+     LKMSAGSDYVATLPGAPF DGKIFDPL LSDGA PG+IK WREAEIKHGRVAMLA++GVIVAE                            FWAFSLLGMA IEYNTI  A+  PS VTGEGGL+++Y PGDLGFDPLNLKP D+A L+ M+TKELNNGRLAMIGIAGML QELVNPADILG
Sbjct:    1 MVAS-QMFIGTAATLIASSTAFVAPMAVRSVTTTPSSP---GLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192

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BLAST of mRNA_E-siliculosus-1a_M_contig75.15594.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 281 bits (718), Expect = 5.430e-90
Identity = 134/161 (83.23%), Postives = 146/161 (90.68%), Query Frame = 0

Query:  109 KIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMALIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 269
            +IFDPL LSDGA PG+IK WREAEIKHGRVAMLA++GVIVAEQYHP FMGPDYIGPAVDHFQEISAQ+PEFWAFSLLGMA IEYNTI  A+  PS VTGEGGL+++Y PGDLGFDPLNLKP D+A L+ M+TKELNNGRLAMIGIAGML QELVNPADILG
Sbjct:  232 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392

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BLAST of mRNA_E-siliculosus-1a_M_contig75.15594.1 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 265 bits (678), Expect = 1.340e-85
Identity = 137/225 (60.89%), Postives = 170/225 (75.56%), Query Frame = 0

Query:   46 MVASPNMFLGTAATLIASSTAFVAPMAVR-SAAPASSASFASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMALIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 269
            MV S    +G A+   AS  AF+ P     SA P S+A+     +MSAGSDYV+TLPGAPF DGK++DP+ LS  A+P +IK WREAEIKHGRVAMLA+VGV+VAE +HPLF+GPDYIGPA+ HF+EI+A++P+FWA +LL +A +EY  I   +AE  PVTGEGG+R +Y PGDLGFDPL L P+D+  L  M+TKELN+GRLAMIGI GM+VQELV P  I G
Sbjct:   52 MVTSTGALVGMASWCFASCEAFIVPTPTTLSARPTSTAA-----RMSAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig75.15594.1 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 235 bits (600), Expect = 2.370e-74
Identity = 131/223 (58.74%), Postives = 160/223 (71.75%), Query Frame = 0

Query:   52 MFLGTAATLIASSTAFVAPMAVRSAAPASS---ASFASALKMSAGSDYVATLPGAPFG---DGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMALIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADIL 268
            +FLGTAATLIASS AFVAP+A    AP SS    + +S  KM+AGSDY A+LPGAPFG   +GK FDP  L+   +P  IK WREAE+KHGRV+MLA VG++V+E +HPLFMGP YIGPAV+H Q+I+  YP FW  SL  +A IE  TI  A+   SPVTG G L+ EY PGDLGFDPL L PKD      +Q++EL+ GR AMIG+ GM+VQE+V+   IL
Sbjct:    6 LFLGTAATLIASSAAFVAPIA----APRSSIARVAASSTPKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGIL 224

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig75.15594.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig75.15594.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G7S1_ECTSI	5.110e-147	97.32	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7S0_ECTSI	5.850e-127	85.71	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7Q6_ECTSI	1.470e-125	83.93	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
D7G7Q9_ECTSI	3.260e-116	80.27	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
D7G7Q7_ECTSI	4.530e-96	86.88	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7S5_ECTSI	1.850e-92	82.61	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
A0A6H5K8D0_9PHAE	2.660e-91	70.09	LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A...	[more]
A0A6H5JWB4_9PHAE	5.430e-90	83.23	LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
D7G5B4_ECTSI	1.340e-85	60.89	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7FQG7_ECTSI	2.370e-74	58.74	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 99..260 e-value: 2.1E-37 score: 129.1
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10		coord: 90..269 e-value: 1.4E-36 score: 128.1
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 55..263
None	No IPR available	PANTHER	PTHR21649:SF63		coord: 55..263
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 107..268

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig75	contig	E-siliculosus-1a_M_contig75:918..34100 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig75.15594.1	mRNA_E-siliculosus-1a_M_contig75.15594.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig75 918..34100 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig75.15594.1 ID=prot_E-siliculosus-1a_M_contig75.15594.1|Name=mRNA_E-siliculosus-1a_M_contig75.15594.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=270bp
VPRHCRHPHRLLDCLRRTDGRAICCPPIPYNFSLSSLSTLSTPNKMVASP
NMFLGTAATLIASSTAFVAPMAVRSAAPASSASFASALKMSAGSDYVATL
PGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAE
QYHPLFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMALIEYNTITKAYA
EPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAM
IGIAGMLVQELVNPADILG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001344	Chloro_AB-bd_pln
IPR023329	Chlorophyll_a/b-bd_dom_sf
IPR022796	Chloroa_b-bind