prot_E-siliculosus-1a_M_contig74.15526.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig74.15526.1
Unique Nameprot_E-siliculosus-1a_M_contig74.15526.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length219
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig74.15526.1 vs. uniprot
Match: D8LKR5_ECTSI (Beta-Casp domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKR5_ECTSI)

HSP 1 Score: 347 bits (891), Expect = 1.480e-112
Identity = 196/213 (92.02%), Postives = 200/213 (93.90%), Query Frame = 0 
Query:    6 VGEEGGPPALGGRRTGVAGARAVKTESSSAAGKGAAAGGRERPKSPSGGVAGRAGDEASTSASVHTAKPTTAAPRRGDGAAGEDREGSDWSSMLAAALLLVRHAMQDTFGKGAVTVMTSKHKKKPAPPPAAAGKQASPDKPLSAEIKIDTDGAVARLRVYVVPPASTAVSGPGESGGGGSAGWRCEVVECTRDSLGSQISMLVERLRAAVSRS 218
            VGEEGGPPALGGR TGVAGARAVKTESSSAAG+GAAAG RER KSPSG VAGRAGDEA  SASVHTAKPT AAPRRGDGAAGED+EGSDWSSMLAAALLL+RHAMQDTFGKGAVTV TSKHKKKP    AAAGKQASPDKPLSAEIKIDTDGAVARL+VYVVPPASTAVSG GESGGGGSAGWRCEVVECTRDSLGSQISMLVERLRAAVSRS
Sbjct:  541 VGEEGGPPALGGRGTGVAGARAVKTESSSAAGEGAAAGDRERTKSPSGSVAGRAGDEARASASVHTAKPTAAAPRRGDGAAGEDQEGSDWSSMLAAALLLIRHAMQDTFGKGAVTV-TSKHKKKPXXXXAAAGKQASPDKPLSAEIKIDTDGAVARLQVYVVPPASTAVSGSGESGGGGSAGWRCEVVECTRDSLGSQISMLVERLRAAVSRS 752
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig74.15526.1 vs. uniprot
Match: A0A6H5L755_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L755_9PHAE)

HSP 1 Score: 302 bits (774), Expect = 1.620e-93
Identity = 178/214 (83.18%), Postives = 181/214 (84.58%), Query Frame = 0 
Query:    6 VGEEGGPPALGGRRTGVAGARAVKTESSSAAGKGAAAGGRERPKSPSGGVAGRAGDEASTSASVHTAKPTTAAPRRGDGAAGEDREGSDWSSMLAAALLLVRHAMQDTFGKGAVTVMTSKHKKKPAPPPAA-AGKQASPDKPLSAEIKIDTDGAVARLRVYVVPPASTAVSGPGESGGGGSAGWRCEVVECTRDSLGSQISMLVERLRAAVSRS 218
            VGEE GPP  GGR TGVAGARAVKTE SS A K AAAGG+ R KSP+GGVAGRAGDEAS SASVHTAKPTTA PRRGDGAAGEDREGSDWSSMLAAALLLVRHAMQDTFGKGAVTV                AGKQ SPDKPLSAEIKIDT GAV R+RVYVVPPASTAVSG GESGG GSAGWRCEVVECTRDSLGSQISMLVERLRAAVSRS
Sbjct:  740 VGEEEGPPVSGGRGTGVAGARAVKTEGSSTALKEAAAGGQGRTKSPAGGVAGRAGDEASGSASVHTAKPTTAVPRRGDGAAGEDREGSDWSSMLAAALLLVRHAMQDTFGKGAVTVXXXXXXXXXXXXXXXXAGKQTSPDKPLSAEIKIDTGGAVVRVRVYVVPPASTAVSGSGESGGRGSAGWRCEVVECTRDSLGSQISMLVERLRAAVSRS 953
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig74.15526.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKR5_ECTSI1.480e-11292.02Beta-Casp domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L755_9PHAE1.620e-9383.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig74contigE-siliculosus-1a_M_contig74:16713..17369 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig74.15526.1mRNA_E-siliculosus-1a_M_contig74.15526.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig74 15970..27826 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig74.15526.1 ID=prot_E-siliculosus-1a_M_contig74.15526.1|Name=mRNA_E-siliculosus-1a_M_contig74.15526.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=219bp
MKGVGVGEEGGPPALGGRRTGVAGARAVKTESSSAAGKGAAAGGRERPKS
PSGGVAGRAGDEASTSASVHTAKPTTAAPRRGDGAAGEDREGSDWSSMLA
AALLLVRHAMQDTFGKGAVTVMTSKHKKKPAPPPAAAGKQASPDKPLSAE
IKIDTDGAVARLRVYVVPPASTAVSGPGESGGGGSAGWRCEVVECTRDSL
GSQISMLVERLRAAVSRS*
back to top