prot_E-siliculosus-1a_M_contig73.15515.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig73.15515.1
Unique Nameprot_E-siliculosus-1a_M_contig73.15515.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length924
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig73.15515.1 vs. uniprot
Match: D8LMP5_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP5_ECTSI)

HSP 1 Score: 1101 bits (2847), Expect = 0.000e+0
Identity = 674/799 (84.36%), Postives = 698/799 (87.36%), Query Frame = 0
Query:  126 SFNNNNQDAGAASTATDNAVNAARPRTKRKNPEKVNDEARCPICQDLLPEENRGIVKCGHVFCLKCVLQWVKKQQNSCPTCRAEVCHIKRTLSLAEALEKNANRKPPTKAQLKRAKRKSAIGKPCPKPDITTEKIRVRKKFSREQIRQNALAPHPQAPGGFLHAQEQAEAAAEAAQTVPDAQPDQVEAIVNQQVAIAVFSSSPSPPPATPQVPSPLPPSSPHSFATDLEDRRVAIEADRQALLESTSAFRGHLSVGGGSHVGGAGGARSIGDNGGGVGVSVGEASLDMRVENNSGSGSDVENXXXXXXXXAVGGRGWRSTVNTDNSSSGVSSDGGGVGSVSRDADNRNSRNNDGVRTGGXXXXXXXXXXXXXXXXXXXXXXXXDNLDXXXXXXXXGRGDGVGSITTFGRLLSVLGSGRIRVSPNGGIGGIDGXXXXXXXXXX-PSSVPCSPLLPSYSRRSNDNNSTSNSSYGVGNPATDPETRSAAQXXXXXXXXXSRYTSLVPEQALAVQGLAALESSPTLRQLRAVARLVVGGSTSAGMARAPAVASVSRRRQLQDGLGQGSRQDRDDEAGVSGRRDGGKSNSEERGNLLPRIDSDDNRSDNISSRGGGNGSEEEPCVEPVSRRTAVGEKDVSHTEERDEYAFPGRNDNDTTAGGTTGSASPVLSDSSAAVACGSSTSILESSAHVSGNDAAPSGSINGGANTAVAGAEDDCGGDPDGAGVAGSVHAGGGISVSASGAAGPGGVAINSGRVHSSPLNNXXXXXXXXTCSYLTWLESRSDFNHWTLPSSDDDDDATSD 923
            S +NNNQDAGAA+TATDNAVNAA PRTKRKNPEKV+D+ARCPICQDLLPEENRGIVKCGHVFCLKCVLQWVKKQQNSCPTCRA+VCHIK+TLSLAEALEKNANRKP TKAQLKR KRKS IGKP PKPDITTEKIRV KK SREQIRQNA+APHPQAPGGFLHAQEQAEAAAEAAQ VPDAQPDQVEAIV+QQVAIAVFSSSP    ATPQVPSPLPPSSP S ATDLEDRRVAIEADR+ALLESTSAFRGH SVGGGS+VGGAGGARSIGD+GGGVG  VGEASLD+RVENNS              XXAVGGRGWRSTVN  NSSSGVSSDG               RNN GVRTGG XXXXXXXXXXX            DNLD XXXXXX G GDGVG+ITT G LLSVLGS RIRVSPNGGIGGID XXXXXXXXXX PSSVPCSPLLPSYSRRSN+N S SNSS+GVGNPATDPETRSAAQ         SRYTSLVPEQALAVQGLAALESSPTLRQLRAVARLVVGGS SAGMA APA+ASVSRRRQ QDGLGQ SRQDRDDEAGV GRRDGGKSN EERGNLLPRID+DDNRSDNISSRGGGNGSEEEPCVEP SRRTAVGE+DVSHTEERDE+AFPGRNDNDTTAGGTTGSASP+LSDSSA VACGSSTSI ES AH SGNDAAPSGSIN GANTAVAGAED CGGD DGAGVAGS HAGGGISVSA+GAAGPGGVAINSGRVHSSPL++ XXXXXXXTCSYLTWLESRSDFNHW  PSSDDDD+A SD
Sbjct:   17 SLDNNNQDAGAAATATDNAVNAAHPRTKRKNPEKVDDKARCPICQDLLPEENRGIVKCGHVFCLKCVLQWVKKQQNSCPTCRAKVCHIKKTLSLAEALEKNANRKPLTKAQLKRTKRKSTIGKPFPKPDITTEKIRVHKKVSREQIRQNAMAPHPQAPGGFLHAQEQAEAAAEAAQAVPDAQPDQVEAIVDQQVAIAVFSSSPXXXXATPQVPSPLPPSSPRSLATDLEDRRVAIEADRRALLESTSAFRGHRSVGGGSYVGGAGGARSIGDSGGGVGDRVGEASLDVRVENNSXXXXXXX-------XXAVGGRGWRSTVNIGNSSSGVSSDGXXXXXXXXXXXXXXXRNNAGVRTGGAXXXXXXXXXXXRDVQGAATSSGGDNLDHXXXXXX-GTGDGVGNITTLGHLLSVLGSRRIRVSPNGGIGGIDDXXXXXXXXXXXPSSVPCSPLLPSYSRRSNNNKSISNSSHGVGNPATDPETRSAAQAAMAVSRAASRYTSLVPEQALAVQGLAALESSPTLRQLRAVARLVVGGSASAGMAGAPALASVSRRRQPQDGLGQESRQDRDDEAGVFGRRDGGKSNGEERGNLLPRIDNDDNRSDNISSRGGGNGSEEEPCVEPASRRTAVGERDVSHTEERDEFAFPGRNDNDTTAGGTTGSASPILSDSSATVACGSSTSIPESFAHTSGNDAAPSGSINDGANTAVAGAEDACGGDADGAGVAGSDHAGGGISVSANGAAGPGGVAINSGRVHSSPLSSNXXXXXXXTCSYLTWLESRSDFNHWPSPSSDDDDNAASD 807          
BLAST of mRNA_E-siliculosus-1a_M_contig73.15515.1 vs. uniprot
Match: A0A6H5JQU9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQU9_9PHAE)

HSP 1 Score: 922 bits (2383), Expect = 0.000e+0
Identity = 618/848 (72.88%), Postives = 651/848 (76.77%), Query Frame = 0
Query:  127 FNNNNQDAGAASTATDNAVNAARPRTKRKNPEKVNDEARCPICQDLLPEENRGIVKCGHVFCLKCVLQWVKKQQNSCPTCRAEVCHIKRTLSLAEALEKNANRKPPTKAQLKRAKRKSAIGKPCP------------KPDITTEKIRVRKKFSREQIRQNALAPHPQAPGGFLHAQEQAEAAAEAAQTVPDAQPDQVEAIVNQQVAIAVFSSSPSPPPATPQVPSPLPPSSPHSFATDLEDRRVAIEADRQALLESTSAFRGHLSVGGGSHVGGAGGARSIGDNGGGVGVSVGEASLDMRVENNSGSGSDV-------------------------------ENXXXXXXXXAVGGRGWRSTVNTDNSSSGVSSDGGGVGSVSRDADNRNSRNNDGVRTGGXXXXXXXXXXXXXXXXXXXXXXXXDNLDXXXXXXXX----GRGDGVGSITTFGRLLSVLGSGRIRVSPNGGIGGIDGXXXXXXXXXXPSSVPCSPLLPSYSRRSNDNNSTSNSSYGVGNPATDPETRSAAQXXXXXXXXXSRYTSLVPEQALAVQGLAALESSPTLRQLRAVARLVVGGSTSAGMARAPAVASVSRRRQLQDGLGQGSRQDRDDEAGVSGRRDGGKSNSEERGNLLPRIDSDDNRSDNISSRGGGNGSEEEPCVEPVSRRTAVGEKDVSHTEERDEYAFPGRNDNDTTAGGTTGSASPVLSDSSAAVACGSSTSILESSAHVSGND-AAPSGSINGGANTAVAGAEDDCGGDPDGAGVAGSVHAGGGISVSASGAAGPGGVAINSGRVHSSPLNNXXXXXXXX---TCSYLTWLESRSDFNHWTLPSSDDDDDATSD 923
             NNNNQDAGAA+TATDNAVNAARPRT+RKNPEK +D  RCPICQDLLPEENRGI+KCGHVFCLKCVLQWVKKQQNSCPTCRAEVCHIKRTLS AEALEKNA+RKPP KAQLKRAKRKSA+GKP P            KPDITTEKIRVRKK SREQIRQNA APHPQAPGGFLHAQEQ EAAAEAAQ +PDAQ DQVEAIVN+QVA AVFSSSPSPPPATPQVPSPLPPSSPHS ATDLEDRRVAIEADR+AL ESTSAFRGH SVGGGS++GGAGGARSI D+GGGVGVSVGEASLDMRVE++SG G DV                                 XXXXXXXX  GGRGWRST N DNSSSGV       GS +RDAD+ NSR     R   XXXXXXXXXXXXXXXXXXXXXXXX    XXXXXXXX    GRGD +G+ITT G LLSVLGSGR+RVSPNG                                                  ATDPETRSAAQ         SRYTSL PEQALAVQGLAAL+SSPTLRQLRAVARLVVGGS SAGMA APAVASVSRR+Q Q GLGQ S + RDD+AGVSGR DGGKSNSEERG+LLPRIDSDDNRS N+S RGGGNG+EEEPC+EPV+RRTA  E DVSHTE+ DEY F GRNDN TTAG TTGSAS +LSDSSAAVAC S TSI ESSAH SGND AAPSGSIN G NTAVAGAE+  GGD +GAGVAGS HAGGGISVS  GAAGPGGVAINSGRV SSPLNNXXXXXXXX   TCSYLTWLE+RSDFNHW  PSS DDDD  SD
Sbjct:   42 LNNNNQDAGAAATATDNAVNAARPRTRRKNPEKDDDGDRCPICQDLLPEENRGILKCGHVFCLKCVLQWVKKQQNSCPTCRAEVCHIKRTLSSAEALEKNADRKPPRKAQLKRAKRKSAVGKPSPGDRYSESDVLQQKPDITTEKIRVRKKVSREQIRQNATAPHPQAPGGFLHAQEQTEAAAEAAQAMPDAQQDQVEAIVNRQVAFAVFSSSPSPPPATPQVPSPLPPSSPHSLATDLEDRRVAIEADRRALFESTSAFRGHRSVGGGSYLGGAGGARSIDDSGGGVGVSVGEASLDMRVESDSGGGGDVGAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGWRSTANIDNSSSGV-------GSGNRDADDSNSRXXXXXRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGDRIGNITTLGHLLSVLGSGRMRVSPNG--------------------------------------------------ATDPETRSAAQAAMAASRAASRYTSLAPEQALAVQGLAALKSSPTLRQLRAVARLVVGGSASAGMAGAPAVASVSRRQQPQHGLGQESGRYRDDDAGVSGRGDGGKSNSEERGSLLPRIDSDDNRSINVSGRGGGNGAEEEPCIEPVARRTAAVEGDVSHTEDGDEYTFLGRNDNKTTAGETTGSASSILSDSSAAVACSSPTSIPESSAHPSGNDVAAPSGSINDGTNTAVAGAENAYGGDANGAGVAGSGHAGGGISVSTIGAAGPGGVAINSGRVQSSPLNNXXXXXXXXXXXTCSYLTWLEARSDFNHWPWPSSSDDDDGASD 832          
BLAST of mRNA_E-siliculosus-1a_M_contig73.15515.1 vs. uniprot
Match: D7FGV7_ECTSI (Similar to PHD finger family protein, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV7_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 1.170e-16
Identity = 57/137 (41.61%), Postives = 74/137 (54.01%), Query Frame = 0
Query:  166 CPICQDLLPEENRGIVKCGHVFCLKCVLQWVKKQQNSCPTCRAEVCHIKRTLSLA-EALEKNANRKPPT---------KAQLKRAKRKSAIGKPCPKPDITTEKIRVRKKFSREQIRQNALAPHPQAPGGFLHAQEQ 292
            C IC D LP   RG++ CGHVFC  C+ QW K   + CP CR ++  I +TLS A EA  K   RKP           + QLKRA+ + +  K  P     T+ +RVR K  +    Q   APHPQA GG+++ QEQ
Sbjct:  176 CAICCDKLPNLERGVLSCGHVFCFACIHQWTKNS-SICPGCRVQIKRITKTLSPADEAKAKGETRKPVVSQRGMKKKPRKQLKRARHRDSRAK-NPASGFVTKTVRVRPKSLKMTPAQQRAAPHPQARGGWMYVQEQ 310          
BLAST of mRNA_E-siliculosus-1a_M_contig73.15515.1 vs. uniprot
Match: D8LMP4_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP4_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 2.940e-15
Identity = 57/131 (43.51%), Postives = 75/131 (57.25%), Query Frame = 0
Query:  166 CPICQDLLPEENRGIVKCGHVFCLKCVLQWVKKQQNSCPTCRAEVCHIKRTLSLAEALEKNANRKPP------TKAQLKRAKRK--------SAIGKPCPKPDITTEKIRVRKKFS-REQIRQNALAPHPQ 281
            CPICQ LLP+E RGI++C HVFC KC+ +W K + ++CP CR EV  I +TLSL E  + N  R P       TKAQ+KRA+ K        S +      P   T+ +RV+ +   +E  R  A APHPQ
Sbjct:   41 CPICQGLLPDEERGILRCNHVFCFKCIHKWTKTE-SACPVCRVEVRSITKTLSLREIEQFNV-RTPHDPSQVRTKAQIKRARAKRFKCRKPASVVFDDIYIPFTVTKAVRVKLRTQMKEMNRLLADAPHPQ 169          
BLAST of mRNA_E-siliculosus-1a_M_contig73.15515.1 vs. uniprot
Match: A0A6H5K2A7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2A7_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 8.780e-15
Identity = 60/173 (34.68%), Postives = 78/173 (45.09%), Query Frame = 0
Query:  166 CPICQDLLPEENRGIVKCGHVFCLKCVLQWVKKQQNSCPTCRAEVCHIKRTLSLA-EALEKNANRKPPTKA---------------------------------------------QLKRAKRKSAIGKPCPKPDITTEKIRVRKKFSREQIRQNALAPHPQAPGGFLHAQEQ 292
            C IC D LP+  RG++ CGHVFC  C+ QW K   + CP CR ++  I +TLS A EA  K   RKP + A                                             QLKRA+R+ +  K  P     T+ +RVR K  +    Q   APHPQAPGG+++ QEQ
Sbjct:   80 CAICCDKLPDLERGVLSCGHVFCFACIHQWTKNS-SICPGCRVQIKRITKTLSPADEAKSKGETRKPVSLAVTRQRGWRSLFLPVERAFRLCLFARFLGPLFLVVSQRGMKKKVRKQLKRARRRDSRAK-NPAAGFVTKTVRVRPKSLKMTPAQQRAAPHPQAPGGWMYVQEQ 250          
BLAST of mRNA_E-siliculosus-1a_M_contig73.15515.1 vs. uniprot
Match: A0A6H5L829_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L829_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 5.240e-9
Identity = 46/145 (31.72%), Postives = 71/145 (48.97%), Query Frame = 0
Query:  151 RTKRKNPEKVNDEARCPICQDLLPEENRGIVKCGHVFCLKCVLQWVKKQQNS--CPTCRAEVCHIKRTLSLAEALEKNANRKPPTKAQLKRAKRKSAIGKPCPKPDITTEKIRVRKKFSREQIRQNALAPHPQAPGGFLHAQEQA 293
            RTK+   +       C ICQ+ LP+  RGI+ CGH FC  C+  W  +  +S  CP+CR     IK+TLS  +               +++ K ++ + K      I  + IRVRK   +++  + A   HP A GG ++A +QA
Sbjct:   43 RTKKAAADDAKKGELCIICQEALPDIERGIIACGHTFCFGCIHTWSSRSGDSVLCPSCRVPFNKIKKTLSPKD---------------VEKEKLRNEVDK------IFVKDIRVRKMSKKKKAIEEARTLHPDAAGGSMNAGQQA 166          
BLAST of mRNA_E-siliculosus-1a_M_contig73.15515.1 vs. uniprot
Match: A0A822EPR3_9NEOB ((mimic poison frog) hypothetical protein (Fragment) n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A822EPR3_9NEOB)

HSP 1 Score: 55.8 bits (133), Expect = 3.180e-5
Identity = 25/53 (47.17%), Postives = 34/53 (64.15%), Query Frame = 0
Query:  158 EKVNDEARCPICQDLLPEENRGIVKCGHVFCLKCVLQWVKKQQNSCPTCRAEV 210
            E  +D+  C IC  +L      ++ CGH+FC KC+LQW+K+QQ  CP CR EV
Sbjct:   19 EHPDDDLLCSICHGVL--RCPVMISCGHIFCRKCILQWLKRQQT-CPCCRTEV 68          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig73.15515.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LMP5_ECTSI0.000e+084.36RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JQU9_9PHAE0.000e+072.88RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FGV7_ECTSI1.170e-1641.61Similar to PHD finger family protein, partial n=1 ... [more]
D8LMP4_ECTSI2.940e-1543.51RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K2A7_9PHAE8.780e-1534.68RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L829_9PHAE5.240e-931.72RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A822EPR3_9NEOB3.180e-547.17(mimic poison frog) hypothetical protein (Fragment... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 88..108
NoneNo IPR availablePANTHERPTHR46563FAMILY NOT NAMEDcoord: 155..466
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 155..214
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 166..206
e-value: 5.0E-6
score: 36.0
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 165..207
e-value: 7.6E-10
score: 39.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 166..207
score: 13.492
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 119..231
e-value: 2.4E-16
score: 61.4
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 183..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig73contigE-siliculosus-1a_M_contig73:736982..744335 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig73.15515.1mRNA_E-siliculosus-1a_M_contig73.15515.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig73 736982..744335 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig73.15515.1 ID=prot_E-siliculosus-1a_M_contig73.15515.1|Name=mRNA_E-siliculosus-1a_M_contig73.15515.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=924bp
GRWSLVPGQGHEKTYHHRRQERHSFTASSQPPSTQRSIMDPPRRSGGRDD
EPRSHWVDPGYCKYYPGTAPTPHPLKITRTYPAPTLLAQRQQQQQEQQQQ
QHNALANEGEKSDGDSNDGDSNDPNSFNNNNQDAGAASTATDNAVNAARP
RTKRKNPEKVNDEARCPICQDLLPEENRGIVKCGHVFCLKCVLQWVKKQQ
NSCPTCRAEVCHIKRTLSLAEALEKNANRKPPTKAQLKRAKRKSAIGKPC
PKPDITTEKIRVRKKFSREQIRQNALAPHPQAPGGFLHAQEQAEAAAEAA
QTVPDAQPDQVEAIVNQQVAIAVFSSSPSPPPATPQVPSPLPPSSPHSFA
TDLEDRRVAIEADRQALLESTSAFRGHLSVGGGSHVGGAGGARSIGDNGG
GVGVSVGEASLDMRVENNSGSGSDVENNSGGGGGGAVGGRGWRSTVNTDN
SSSGVSSDGGGVGSVSRDADNRNSRNNDGVRTGGAAEAAAQESSSNRDVQ
GAATSSGGDNLDHDDDDDDDGRGDGVGSITTFGRLLSVLGSGRIRVSPNG
GIGGIDGGGGGGIAAAAPSSVPCSPLLPSYSRRSNDNNSTSNSSYGVGNP
ATDPETRSAAQAAMAASRAASRYTSLVPEQALAVQGLAALESSPTLRQLR
AVARLVVGGSTSAGMARAPAVASVSRRRQLQDGLGQGSRQDRDDEAGVSG
RRDGGKSNSEERGNLLPRIDSDDNRSDNISSRGGGNGSEEEPCVEPVSRR
TAVGEKDVSHTEERDEYAFPGRNDNDTTAGGTTGSASPVLSDSSAAVACG
SSTSILESSAHVSGNDAAPSGSINGGANTAVAGAEDDCGGDPDGAGVAGS
VHAGGGISVSASGAAGPGGVAINSGRVHSSPLNNNNNNNNNNTCSYLTWL
ESRSDFNHWTLPSSDDDDDATSD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017907Znf_RING_CS
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING