prot_E-siliculosus-1a_M_contig73.15508.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig73.15508.1
Unique Nameprot_E-siliculosus-1a_M_contig73.15508.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length462
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig73.15508.1 vs. uniprot
Match: A0A6H5KMH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMH9_9PHAE)

HSP 1 Score: 470 bits (1210), Expect = 2.530e-160
Identity = 391/470 (83.19%), Postives = 399/470 (84.89%), Query Frame = 0 
Query:    1 MGVLCMAVHVPAGGGGRVVIVTGGDDQAICVAELEVVAVLDDGRCSPTTTITSDRRGPSPSQGSRGQGGDEVPARKRRSAVRLVAGSPQVFEGGAGSAIKGMQLLPVDPPPPPNPPARLPGPSTESPITMQSPTPSAGIHDDDAAVAPPPSSRSANFSSSFSTTPAVEPGVGAGAGPPCSLSLFTVARDQRLSRWNLVKDGSSSSSRSFGSVGDWSPSSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDME----------GASRQGHEGAAERRWRLRWRAGCVTEVCDVSGLDVAPLPRHEEPRQHRRHAAGEDTLGXXXXXXXXXXXXXXXXXXSGDRASSPCHRHRTVAALLREKAEGEETATNACGGVPGSETEVSTRRDAFVAPAAIVAVSGQGLQLVVFGAC 460
            MGVLCMAVHVPAG  GRVVIVTGGDDQAICVAELEVV VLDDGRCSPTT I SDR GPS SQGSRGQGG EVPAR+RRSAVRLVAGSPQVFEG AGSAIKGMQLLPVDPP     P RLPGPSTESP TMQSPTPSAGIHDDDAAVAPPPSSRSANFS S STTPAVEPGVGAGAGPPCSLSLFTVARDQRLSRW+LVKD S                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             GASRQG +GAAERRWRLRWRAGCVT+VCDVSGLDVAPL   E   QHR+HAAGE TLG   XXXXXXXXXXXXXXXSGDRASSPCHRHRTVA LLR++ EG ETA NACGGVP SE E  TR +AF APAAIVAVSGQGLQLVVFGAC
Sbjct:    1 MGVLCMAVHVPAGEAGRVVIVTGGDDQAICVAELEVVVVLDDGRCSPTTRIASDR-GPSSSQGSRGQGGGEVPARERRSAVRLVAGSPQVFEGAAGSAIKGMQLLPVDPPSXXXXPFRLPGPSTESPTTMQSPTPSAGIHDDDAAVAPPPSSRSANFSFS-STTPAVEPGVGAGAGPPCSLSLFTVARDQRLSRWDLVKDSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASRQGQKGAAERRWRLRWRAGCVTDVCDVSGLDVAPLSPREP--QHRQHAAGEATLGGRSXXXXXXXXXXXXXXXSGDRASSPCHRHRTVARLLRKEGEGGETAENACGGVPSSEAEDWTRGEAFGAPAAIVAVSGQGLQLVVFGAC 466
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig73.15508.1 vs. uniprot
Match: D7FVQ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ9_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 2.200e-28
Identity = 66/77 (85.71%), Postives = 67/77 (87.01%), Query Frame = 0 
Query:    1 MGVLCMAVHVPAGGGGRVVIVTGGDDQAICVAELEVVAVLDDGRCSPTTTITSDRRGPSPSQGSRGQGGDEVPARKR 77
            MGVLCMAVHVPAG  GRVV+VTGGDDQAICVAELEV  VLDDGRCSPTTTI SDR G S S G RGQGGDEVPARKR
Sbjct:  107 MGVLCMAVHVPAGERGRVVVVTGGDDQAICVAELEVAEVLDDGRCSPTTTIASDR-GRSSSLGPRGQGGDEVPARKR 182
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig73.15508.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KMH9_9PHAE2.530e-16083.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVQ9_ECTSI2.200e-2885.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig73contigE-siliculosus-1a_M_contig73:649664..651835 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig73.15508.1mRNA_E-siliculosus-1a_M_contig73.15508.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig73 649628..651839 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig73.15508.1 ID=prot_E-siliculosus-1a_M_contig73.15508.1|Name=mRNA_E-siliculosus-1a_M_contig73.15508.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=462bp
MGVLCMAVHVPAGGGGRVVIVTGGDDQAICVAELEVVAVLDDGRCSPTTT
ITSDRRGPSPSQGSRGQGGDEVPARKRRSAVRLVAGSPQVFEGGAGSAIK
GMQLLPVDPPPPPNPPARLPGPSTESPITMQSPTPSAGIHDDDAAVAPPP
SSRSANFSSSFSTTPAVEPGVGAGAGPPCSLSLFTVARDQRLSRWNLVKD
GSSSSSRSFGSVGDWSPSSEQQQQQPATTPAGTNDRRAASGPTTPRRRDD
DDGGAVGVSSCCPSGGGDGDRDPLRARRRRPMLSSLSQKGGGSDDDDGSG
ESEEQKEEEDMEGASRQGHEGAAERRWRLRWRAGCVTEVCDVSGLDVAPL
PRHEEPRQHRRHAAGEDTLGGDRRSSSSSQQRAPGGGGSGDRASSPCHRH
RTVAALLREKAEGEETATNACGGVPGSETEVSTRRDAFVAPAAIVAVSGQ
GLQLVVFGACS*
back to top