prot_E-siliculosus-1a_M_contig73.15504.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig73.15504.1
Unique Name	prot_E-siliculosus-1a_M_contig73.15504.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	90

Homology

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig73.15504.1 vs. uniprot
Match: D7FVR3_ECTSI (Dynein light chain n=2 Tax=Stramenopiles TaxID=33634 RepID=D7FVR3_ECTSI)

HSP 1 Score: 180 bits (457), Expect = 1.350e-57
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0

Query:    1 MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89
            MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG
Sbjct:    1 MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig73.15504.1 vs. uniprot
Match: C1FDC9_MICCC (Dynein light chain n=2 Tax=Eukaryota TaxID=2759 RepID=C1FDC9_MICCC)

HSP 1 Score: 176 bits (446), Expect = 6.420e-56
Identity = 86/89 (96.63%), Postives = 88/89 (98.88%), Query Frame = 0

Query:    1 MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89
            MSERKAVIKNADMSEDMQQDAVDCA+QALEKYNIEKDIAAFIKKEFDKKY+ TWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG
Sbjct:    1 MSERKAVIKNADMSEDMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig73.15504.1 vs. uniprot
Match: A0A2C9K100_BIOGL (Dynein light chain n=4 Tax=Euthyneura TaxID=216307 RepID=A0A2C9K100_BIOGL)

HSP 1 Score: 176 bits (445), Expect = 9.130e-56
Identity = 85/89 (95.51%), Postives = 88/89 (98.88%), Query Frame = 0

Query:    1 MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89
            MSERKAVIKNADMSEDMQQDAVDCA+QALEKYNIEKDIAAFIKKEFDKKY+ TWHCIVGRNFGSYVTHETKHFIYFYLGQVA+LLFKSG
Sbjct:    1 MSERKAVIKNADMSEDMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig73.15504.1 vs. uniprot
Match: W4HCB9_9STRA (Dynein light chain n=26 Tax=Oomycota TaxID=4762 RepID=W4HCB9_9STRA)

HSP 1 Score: 175 bits (443), Expect = 1.840e-55
Identity = 85/89 (95.51%), Postives = 87/89 (97.75%), Query Frame = 0

Query:    1 MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89
            MSERKAVIKNADM EDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKY+ TWHCIVGRNFGSYVTHETKHFIYFYLGQVA+LLFKSG
Sbjct:    1 MSERKAVIKNADMHEDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig73.15504.1 vs. uniprot
Match: C1ML17_MICPC (Dynein light chain n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1ML17_MICPC)

HSP 1 Score: 175 bits (443), Expect = 1.840e-55
Identity = 85/89 (95.51%), Postives = 88/89 (98.88%), Query Frame = 0

Query:    1 MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89
            MSERKAVIKNADMSED+QQDAVDCA+QALEKYNIEKDIAAFIKKEFDKKY+ TWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG
Sbjct:    1 MSERKAVIKNADMSEDLQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig73.15504.1 vs. uniprot
Match: A0A7L9QEK2_9CHLO (Dynein light chain n=1 Tax=Trebouxia sp. TR9 TaxID=1825957 RepID=A0A7L9QEK2_9CHLO)

HSP 1 Score: 175 bits (444), Expect = 2.570e-55
Identity = 84/89 (94.38%), Postives = 88/89 (98.88%), Query Frame = 0

Query:    1 MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89
            MSERKAVIKNADMSEDMQQDA+DCA+QALEKYN+EKDIAAFIKKEFDKKY+ TWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG
Sbjct:   23 MSERKAVIKNADMSEDMQQDAIDCATQALEKYNVEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 111

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig73.15504.1 vs. uniprot
Match: M4BH12_HYAAE (Dynein light chain n=5 Tax=Eukaryota TaxID=2759 RepID=M4BH12_HYAAE)

HSP 1 Score: 174 bits (441), Expect = 3.720e-55
Identity = 85/89 (95.51%), Postives = 87/89 (97.75%), Query Frame = 0

Query:    1 MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89
            M+ERKAVIKNADM EDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKY+ TWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG
Sbjct:    1 MAERKAVIKNADMHEDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig73.15504.1 vs. uniprot
Match: A0A401QGE4_SCYTO (Dynein light chain n=3 Tax=Chondrichthyes TaxID=7777 RepID=A0A401QGE4_SCYTO)

HSP 1 Score: 174 bits (440), Expect = 5.290e-55
Identity = 83/89 (93.26%), Postives = 88/89 (98.88%), Query Frame = 0

Query:    1 MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89
            MS+RKAVIKNADMSEDMQQDAVDCA+QA+EKYNIEKDIAAFIKKEFDKKY+ TWHCIVGRNFGSYVTHETKHFIYFYLGQVA+LLFKSG
Sbjct:    1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig73.15504.1 vs. uniprot
Match: A0A485LAB0_9STRA (Dynein light chain n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LAB0_9STRA)

HSP 1 Score: 175 bits (443), Expect = 5.340e-55
Identity = 85/89 (95.51%), Postives = 87/89 (97.75%), Query Frame = 0

Query:    1 MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89
            MSERKAVIKNADM EDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKY+ TWHCIVGRNFGSYVTHETKHFIYFYLGQVA+LLFKSG
Sbjct:   35 MSERKAVIKNADMHEDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 123

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig73.15504.1 vs. uniprot
Match: A0A6A3E1H5_9STRA (Dynein light chain n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3E1H5_9STRA)

HSP 1 Score: 175 bits (443), Expect = 6.890e-55
Identity = 85/89 (95.51%), Postives = 87/89 (97.75%), Query Frame = 0

Query:    1 MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89
            MSERKAVIKNADM EDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKY+ TWHCIVGRNFGSYVTHETKHFIYFYLGQVA+LLFKSG
Sbjct:   43 MSERKAVIKNADMHEDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 131

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig73.15504.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig73.15504.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FVR3_ECTSI	1.350e-57	100.00	Dynein light chain n=2 Tax=Stramenopiles TaxID=336...	[more]
C1FDC9_MICCC	6.420e-56	96.63	Dynein light chain n=2 Tax=Eukaryota TaxID=2759 Re...	[more]
A0A2C9K100_BIOGL	9.130e-56	95.51	Dynein light chain n=4 Tax=Euthyneura TaxID=216307...	[more]
W4HCB9_9STRA	1.840e-55	95.51	Dynein light chain n=26 Tax=Oomycota TaxID=4762 Re...	[more]
C1ML17_MICPC	1.840e-55	95.51	Dynein light chain n=2 Tax=Micromonas pusilla TaxI...	[more]
A0A7L9QEK2_9CHLO	2.570e-55	94.38	Dynein light chain n=1 Tax=Trebouxia sp. TR9 TaxID...	[more]
M4BH12_HYAAE	3.720e-55	95.51	Dynein light chain n=5 Tax=Eukaryota TaxID=2759 Re...	[more]
A0A401QGE4_SCYTO	5.290e-55	93.26	Dynein light chain n=3 Tax=Chondrichthyes TaxID=77...	[more]
A0A485LAB0_9STRA	5.340e-55	95.51	Dynein light chain n=1 Tax=Aphanomyces stellatus T...	[more]
A0A6A3E1H5_9STRA	6.890e-55	95.51	Dynein light chain n=2 Tax=Phytophthora TaxID=4783...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 1..88 e-value: 7.1E-61 score: 218.2
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 5..88 e-value: 1.9E-42 score: 143.5
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 1..89
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10		coord: 1..89 e-value: 7.7E-48 score: 162.5
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 1..89
None	No IPR available	PANTHER	PTHR11886:SF62	DYNEIN LIGHT CHAIN	coord: 1..89
IPR019763	Dynein light chain, type 1/2, conserved site	PROSITE	PS01239	DYNEIN_LIGHT_1	coord: 55..69

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig73	contig	E-siliculosus-1a_M_contig73:606312..608561 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig73.15504.1	mRNA_E-siliculosus-1a_M_contig73.15504.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig73 605024..611495 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig73.15504.1 ID=prot_E-siliculosus-1a_M_contig73.15504.1|Name=mRNA_E-siliculosus-1a_M_contig73.15504.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=90bp
MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKY
SATWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019763	Dynein_light_1/2_CS
IPR037177	DLC_sf
IPR001372	Dynein_light_chain_typ-1/2