prot_E-siliculosus-1a_M_contig73.15490.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig73.15490.1
Unique Nameprot_E-siliculosus-1a_M_contig73.15490.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length198
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig73.15490.1 vs. uniprot
Match: D7FRY6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRY6_ECTSI)

HSP 1 Score: 360 bits (925), Expect = 1.790e-125
Identity = 195/197 (98.98%), Postives = 196/197 (99.49%), Query Frame = 0 
Query:    1 MAPVSYITLVVSALTLLLPRKGADAFVHPRPALLRSRQQQQSVMVMSATRRAFLSDQLVGAIGAGVLGLGLATERATAYEKEYLKEPTAEFKAMEARQADFSAAQRAYKQEFVKKLDAFLAVETDEEAVSTLNAMSNTVIQRGGLPESVRINDLLKTCRRKKAAMKDSGKWSTPVQIAYETLVQTTNRTVVPLQSGS 197
            MAPVSYITLVVSALTLLLPRKGADAFVHPRPAL RSRQQQQS+MVMSATRRAFLSDQLVGAIGAGVLGLGLATERATAYEKEYLKEPTAEFKAMEARQADFSAAQRAYKQEFVKKLDAFLAVETDEEAVSTLNAMSNTVIQRGGLPESVRINDLLKTCRRKKAAMKDSGKWSTPVQIAYETLVQTTNRTVVPLQSGS
Sbjct:    1 MAPVSYITLVVSALTLLLPRKGADAFVHPRPALPRSRQQQQSIMVMSATRRAFLSDQLVGAIGAGVLGLGLATERATAYEKEYLKEPTAEFKAMEARQADFSAAQRAYKQEFVKKLDAFLAVETDEEAVSTLNAMSNTVIQRGGLPESVRINDLLKTCRRKKAAMKDSGKWSTPVQIAYETLVQTTNRTVVPLQSGS 197
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig73.15490.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRY6_ECTSI1.790e-12598.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..197
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.651

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig73contigE-siliculosus-1a_M_contig73:426364..428626 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig73.15490.1mRNA_E-siliculosus-1a_M_contig73.15490.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig73 426364..428626 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig73.15490.1 ID=prot_E-siliculosus-1a_M_contig73.15490.1|Name=mRNA_E-siliculosus-1a_M_contig73.15490.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=198bp
MAPVSYITLVVSALTLLLPRKGADAFVHPRPALLRSRQQQQSVMVMSATR
RAFLSDQLVGAIGAGVLGLGLATERATAYEKEYLKEPTAEFKAMEARQAD
FSAAQRAYKQEFVKKLDAFLAVETDEEAVSTLNAMSNTVIQRGGLPESVR
INDLLKTCRRKKAAMKDSGKWSTPVQIAYETLVQTTNRTVVPLQSGS*
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