prot_E-siliculosus-1a_M_contig73.15483.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig73.15483.1
Unique Nameprot_E-siliculosus-1a_M_contig73.15483.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length264
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig73.15483.1 vs. uniprot
Match: A0A6H5KYE3_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYE3_9PHAE)

HSP 1 Score: 474 bits (1221), Expect = 2.030e-168
Identity = 251/263 (95.44%), Postives = 254/263 (96.58%), Query Frame = 0
Query:    1 MKAPTLLLCVLPAASGFIPSPVVVSRTSLADRRQRATIAQVATVAIDTPRTLPKGKRVVRRKKRQPSQPKHVDTTNAPVTLIKSKAEYDEILRHNSNSLVVIKFFAPWCRSCKALDVKYRRMAVENDDVTFVEIDVHQSPDLKKVLGVRAVPTVKLHAGSLGQVASFTCGPRKAPELARKIQLCKDVPALTARLGKGSGMIEMLADELNSDKPVAASSLPQPGREVRSAESVIAKGLMEKVANQEMAESSQRTLDEFPTEDGL 263
            MKAPTLLLCVLPAASGFIPS VVVSRTSL DRRQR TIAQ+ATVAIDTPRTLPKGKR+VRRKKRQPSQPKHVDT NAPVTLIKSKAEYDEILRHN NSLVVIKFFAPWCRSCKALDVKYRRMAVENDDV FVEIDVHQSPDLKKVLGVRAVPTVKLHAG LGQVASFTCGPRKAPELARKIQLCKDVPALTARLGKGSGMIEMLADELNSDKPVAASSLPQPGREVRSAESVIAKGLMEKVA+QEMAESSQRTLDE PTED L
Sbjct:    1 MKAPTLLLCVLPAASGFIPS-VVVSRTSLPDRRQRTTIAQIATVAIDTPRTLPKGKRIVRRKKRQPSQPKHVDTANAPVTLIKSKAEYDEILRHNINSLVVIKFFAPWCRSCKALDVKYRRMAVENDDVKFVEIDVHQSPDLKKVLGVRAVPTVKLHAGPLGQVASFTCGPRKAPELARKIQLCKDVPALTARLGKGSGMIEMLADELNSDKPVAASSLPQPGREVRSAESVIAKGLMEKVAHQEMAESSQRTLDEVPTEDRL 262          
BLAST of mRNA_E-siliculosus-1a_M_contig73.15483.1 vs. uniprot
Match: A0A835Z936_9STRA (Thioredoxin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z936_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.170e-38
Identity = 76/169 (44.97%), Postives = 108/169 (63.91%), Query Frame = 0
Query:   72 VDTTNAPVTLIKSKAEYDEILRHNSNSLVVIKFFAPWCRSCKALDVKYRRMAVENDDVTFVEIDVHQSPDLKKVLGVRAVPTVKLHAGSLGQVASFTCGPRKAPELARKIQLCKDVPALTARLGKGSGMIEMLADELNSDKPVAASSLPQPGREVRSAESVIAKGLMEK 240
            VD + APVT + +  EY  +L  N  SLVV K+FAPWCRSCKA+D+K++R+A+EN  V F EID+  S +LK+  GV+A+P + +HAG LG V +FTCGP K P L+R+I +  +V A  A+   G      L ++L++     AS LP P   + +A    +KGLME+
Sbjct:   12 VDLSTAPVTRVTTSQEYHALLAENPESLVVFKWFAPWCRSCKAMDLKFKRLALENPCVVFAEIDIDVSRELKRQHGVKAIPAIHMHAGHLGLVENFTCGPSKVPLLSRRIDMYANVAAYVAKAKGG------LMEKLSAFSAGVASKLPIPSAPIGTA----SKGLMER 170          
BLAST of mRNA_E-siliculosus-1a_M_contig73.15483.1 vs. uniprot
Match: A0A836CK13_9STRA (Thioredoxin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK13_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.090e-27
Identity = 54/118 (45.76%), Postives = 78/118 (66.10%), Query Frame = 0
Query:   75 TNAPVTLIKSKAEYDEILRHNSNSLVVIKFFAPWCRSCKALDVKYRRMAVENDDVTFVEIDVHQSPDLKKVLGVRAVPTVKLHAGSLGQVASFTCGPRKAPELARKIQLCKDVPALTA 192
            + APV  + S  EY ++L  N + LVV K+ AP+CR+CKA+D+K+RR+A+E  DV F +I+V ++ DLK+  GV  +P + +HAG LGQV +F CGP  AP L  ++    DV A  A
Sbjct:   75 STAPVQHVASSQEYHQLLALNPDKLVVFKWHAPYCRACKAMDLKFRRLALERRDVVFADINVARAVDLKRAHGVAVIPAIHMHAGHLGQVEAFACGPSSAPLLRARVDRYADVSAYVA 192          
BLAST of mRNA_E-siliculosus-1a_M_contig73.15483.1 vs. uniprot
Match: A0A2V3IJC0_9FLOR (Thioredoxin-like 2-1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJC0_9FLOR)

HSP 1 Score: 99.8 bits (247), Expect = 3.540e-22
Identity = 50/111 (45.05%), Postives = 71/111 (63.96%), Query Frame = 0
Query:   74 TTNAPVTLIKSKAEYDEILRHNSNSLVVIKFFAPWCRSCKALDVKYRRMAVENDDVTFVEIDVHQSPDLKKVLGVRAVPTVKLHAGSLGQVASFTCGPRKAPELARKIQLC 184
            TT  PV LI    +Y ++LR +S+SLVV+K FAPWCRSC+AL  K  R A E  +V F ++D  Q+ +L   LGV ++PT   + G  G++  F+CGP++A  L  KI+ C
Sbjct:   58 TTLEPVQLIHGVEQYLQVLRESSDSLVVLKVFAPWCRSCRALTPKVNRFAREFSNVRFFKMDYEQNKELCHRLGVASMPTFVFYWGVAGEIEKFSCGPQRAYILREKIEQC 168          
BLAST of mRNA_E-siliculosus-1a_M_contig73.15483.1 vs. uniprot
Match: A0A7S1TN71_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TN71_9RHOD)

HSP 1 Score: 91.7 bits (226), Expect = 6.320e-19
Identity = 43/108 (39.81%), Postives = 66/108 (61.11%), Query Frame = 0
Query:   74 TTNAPVTLIKSKAEYDEILRHNSNSLVVIKFFAPWCRSCKALDVKYRRMAVENDDVTFVEIDVHQSPDLKKVLGVRAVPTVKLHAGSLGQVASFTCGPRKAPELARKI 181
            T   PV  +    +Y   L  +S  LVVIKF+APWCRSCKA++ K +R+A E  ++ F E+D  ++ +L + +GV+++P    + GS G+V  FT GP +A  L  K+
Sbjct:   77 TRMEPVVRLSGFGDYLAALECSSERLVVIKFYAPWCRSCKAMEPKVKRLAREYPEILFCEVDFQENHELCRRIGVKSIPAFHFYDGSAGRVEDFTAGPARAKMLIEKV 184          
BLAST of mRNA_E-siliculosus-1a_M_contig73.15483.1 vs. uniprot
Match: A0A7S3YAB7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAB7_HETAK)

HSP 1 Score: 89.7 bits (221), Expect = 9.300e-18
Identity = 48/112 (42.86%), Postives = 66/112 (58.93%), Query Frame = 0
Query:   87 EYDEILRHNSNSLVVIKFFAPWCRSCKALDVKYRRMA---VENDDVTFVEIDVH--QSPDLKKVLGVRAVPTVKLHAGSLGQVASFTCGPRKAPELARKIQLCKDVPALTAR 193
            EY ++L  + N LVV+KF+APWCRSCKALDVK+R+ A       DV F E DV   Q+  +KK+L +  +P V ++ GS G+V  F CGP K      +++   D     AR
Sbjct:   98 EYLDVLTQSKNQLVVMKFYAPWCRSCKALDVKFRKWARGEYAARDVRFFECDVFDPQNAAIKKMLEIDNIPLVHMYQGSQGKVEDFKCGPSKFEYFVERLEARLDPAGAAAR 209          
BLAST of mRNA_E-siliculosus-1a_M_contig73.15483.1 vs. uniprot
Match: A0A1X6NXU9_PORUM (Thioredoxin domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NXU9_PORUM)

HSP 1 Score: 84.0 bits (206), Expect = 1.120e-15
Identity = 44/116 (37.93%), Postives = 69/116 (59.48%), Query Frame = 0
Query:   66 PSQPKHVDTTNAPVTLIKSKAEYDEILRHNSNSLVVIKFFAPWCRSCKALDVKYRRMAVENDDVTFVEIDVHQSPDLKKVLGVRAVPTVKLHAGSLGQVASFTCGPRKAPELARKI 181
            P++   V    AP+T   S  EY E+L+ +S  + V+KF+APWCRSC+A+  K  R+A E  ++ F EID   + +L   LGV+ +PT   ++G+ G+V  F  GP +A  +  K+
Sbjct:   77 PARAMDVAEVVAPIT---SFDEYMEMLQASSGGVAVLKFYAPWCRSCRAIAPKVARLAHEFPEIRFYEIDYEANKELCWRLGVKNLPTFHFYSGAAGRVEDFNAGPARAHVIREKV 189          
BLAST of mRNA_E-siliculosus-1a_M_contig73.15483.1 vs. uniprot
Match: A0A7S3ATR9_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ATR9_9EUKA)

HSP 1 Score: 81.3 bits (199), Expect = 4.060e-15
Identity = 46/111 (41.44%), Postives = 65/111 (58.56%), Query Frame = 0
Query:   72 VDTTNAPVTLIKSKAEYDEILRHNSNSLVVIKFFAPWCRSCKALDVKYRRMAVENDDVTFVEIDVHQSPDLKKVLGVRAVPTVKLHAGSLGQVASFTCGPRKAPELARKIQ 182
            +D T+A   LI      +E  R N   +VVIKFFA WCR+CKA+  K+ R+A +  DV F EI    +  L K LG++ +P +++  GS G+V  FTCGP K   L  K++
Sbjct:   58 IDDTDAYEALI------EEATRENR--VVVIKFFASWCRACKAMSPKFTRIADDWPDVEFHEIMFDNNKKLCKSLGIKILPYIEIIGGSGGKVEGFTCGPSKISRLQEKLE 160          
BLAST of mRNA_E-siliculosus-1a_M_contig73.15483.1 vs. uniprot
Match: A0A7S3VCG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VCG8_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 8.030e-15
Identity = 42/142 (29.58%), Postives = 78/142 (54.93%), Query Frame = 0
Query:   82 IKSKAEYDEILRHNSNSLVVIKFFAPWCRSCKALDVKYRRMAVEND----DVTFVEIDVHQSPDLKKVLGVRAVPTVKLHAGSLGQVASFTCGPRKAPELARKIQLCKDVPALTARLGKGSGMIEMLADELNSDKPVAASSL 219
            ++SK E+  +L  N + ++++KF+APWCR+CK L+ K+ +++ +       + F ++ V  + +  K LGV A+P+V ++ G  G + SF CGP K P L +KI        +  ++   +  ++ L D +    P A  S+
Sbjct:  119 LESKEEHQALLEQNQDKIILLKFYAPWCRACKGLEPKFIQISKDKKYAKLPLVFAQLSVANAKEYVKALGVLALPSVHIYGGEEGLLESFPCGPSKVPILKKKI-----AQVVNMKVDPKTFELKPLCDSVGEAVPCAVRSI 255          
BLAST of mRNA_E-siliculosus-1a_M_contig73.15483.1 vs. uniprot
Match: K0SW29_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SW29_THAOC)

HSP 1 Score: 84.3 bits (207), Expect = 8.190e-15
Identity = 41/104 (39.42%), Postives = 68/104 (65.38%), Query Frame = 0
Query:   82 IKSKAEYDEILRHNSNSLVVIKFFAPWCRSCKALDVKYRRMAVE----NDDVTFVEIDVHQSPDLKKVLGVRAVPTVKLHAGSLGQVASFTCGPRKAPELARKI 181
            I++  ++   L  NS+ ++VIKFFAPWCR+CK+++ KY +++ +    N  + F ++ V  +    K LG+ A+P+V+++AGS G V +F CGP K P L RK+
Sbjct:   93 IQTPEQHTAWLDANSDKIMVIKFFAPWCRACKSVEPKYVQISRDPKYANIPIIFGQLSVQNNKSYVKSLGIMALPSVQIYAGSEGLVENFPCGPSKIPLLKRKL 196          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig73.15483.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYE3_9PHAE2.030e-16895.44Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A835Z936_9STRA1.170e-3844.97Thioredoxin domain-containing protein n=1 Tax=Trib... [more]
A0A836CK13_9STRA2.090e-2745.76Thioredoxin domain-containing protein n=1 Tax=Trib... [more]
A0A2V3IJC0_9FLOR3.540e-2245.05Thioredoxin-like 2-1, chloroplastic n=1 Tax=Gracil... [more]
A0A7S1TN71_9RHOD6.320e-1939.81Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S3YAB7_HETAK9.300e-1842.86Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1X6NXU9_PORUM1.120e-1537.93Thioredoxin domain-containing protein n=1 Tax=Porp... [more]
A0A7S3ATR9_9EUKA4.060e-1541.44Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S3VCG8_9STRA8.030e-1529.58Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
K0SW29_THAOC8.190e-1539.42Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 81..181
e-value: 2.1E-17
score: 63.0
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 59..186
score: 9.808
NoneNo IPR availableGENE3D3.40.30.10coord: 69..187
e-value: 3.5E-22
score: 80.4
NoneNo IPR availablePANTHERPTHR43601FAMILY NOT NAMEDcoord: 26..185
NoneNo IPR availablePANTHERPTHR43601:SF10THIOREDOXIN-LIKE 2-2, CHLOROPLASTICcoord: 26..185
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..263
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.647
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 72..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig73contigE-siliculosus-1a_M_contig73:377883..386215 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig73.15483.1mRNA_E-siliculosus-1a_M_contig73.15483.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig73 377389..386215 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig73.15483.1 ID=prot_E-siliculosus-1a_M_contig73.15483.1|Name=mRNA_E-siliculosus-1a_M_contig73.15483.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=264bp
MKAPTLLLCVLPAASGFIPSPVVVSRTSLADRRQRATIAQVATVAIDTPR
TLPKGKRVVRRKKRQPSQPKHVDTTNAPVTLIKSKAEYDEILRHNSNSLV
VIKFFAPWCRSCKALDVKYRRMAVENDDVTFVEIDVHQSPDLKKVLGVRA
VPTVKLHAGSLGQVASFTCGPRKAPELARKIQLCKDVPALTARLGKGSGM
IEMLADELNSDKPVAASSLPQPGREVRSAESVIAKGLMEKVANQEMAESS
QRTLDEFPTEDGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR013766Thioredoxin_domain