prot_E-siliculosus-1a_M_contig73.15472.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig73.15472.1
Unique Nameprot_E-siliculosus-1a_M_contig73.15472.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length799
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig73.15472.1 vs. uniprot
Match: D7FRX2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRX2_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 3.350e-12
Identity = 36/40 (90.00%), Postives = 38/40 (95.00%), Query Frame = 0 
Query:  250 RAGLRQGFMTFLENRRCAQSAASRAKYHDRTRKLRRSIHR 289
            R GLRQGFMTFL+NRRCAQSAA+RAK HDRTRKLRRSIHR
Sbjct:   16 RVGLRQGFMTFLDNRRCAQSAAARAKDHDRTRKLRRSIHR 55
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig73.15472.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRX2_ECTSI3.350e-1290.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 101..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig73contigE-siliculosus-1a_M_contig73:303216..308641 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig73.15472.1mRNA_E-siliculosus-1a_M_contig73.15472.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig73 303216..308650 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig73.15472.1 ID=prot_E-siliculosus-1a_M_contig73.15472.1|Name=mRNA_E-siliculosus-1a_M_contig73.15472.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=799bp
MLVESAMIDSQLAKIAAVRSCLGHGGQGPSRGLETGDCHQTSNDHTKILS
KIFVCWRHELEAKARDRAWWATRNRCTLTKAVVMWSAWLQRNRGMDAELA
AREALAEAKRLSRALHRFREMCVRRRRKRHLKRVFRAFHRLSQRRLQRAW
CRWRKLALDIQAKAVFHSWAATTKQSLLLDEAKRAVSASQEAKAIAIVLK
RWRSRARASALARLLHAWAVIGPVRKAVGVMRSLAYEARAEERLRYRLLR
AGLRQGFMTFLENRRCAQSAASRAKYHDRTRKLRRSIHRWVAGHSQKMAI
ELWQHSVLQAKQRTSIKIWVSETNVSKRTRQRARRLCVKRLKQHVVRRRN
TRALASEAVKFRRAHLWGGLRRWHARSISIQRQQRSNDAAYRMRRARFLR
QGLASFSALKQESCAVYRAKVFRRDRCLNATISCWRRTITQFGDQHDLGQ
SACRHFRGQTLSAGLSFWRRRVVHVTRVNNTITRFQGQQGQRVGFLKFRR
WMENRRLVRLSMWRAGVWAEAHRARNALMTWRSHARAFAGIQTSVRIARH
RKQTRQAAQSRCSTLDGYVFQVLRTHARARNLERRVLRAWFSHTESTARA
SKQVRVFRLRSGLRGLRSWVKSSETWRQRRLQAKTHRNHRVVGAMFSTWR
NRVYPLGLRAHWGGIRPCTCNEGTTNSKTTQQKEELAVGSREMQCLRTTE
AATARDWESVAGCSSLLLLRLPMIGQRVRRVLYVWRKRAKKEIRFRYIRD
TLPKRKVPRPPRASQEREIGLLMGNPKPKGYLQLHMLNTSEKRALPIR*
back to top