prot_E-siliculosus-1a_M_contig721.15435.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig721.15435.1
Unique Name	prot_E-siliculosus-1a_M_contig721.15435.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	78

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig721.15435.1 vs. uniprot
Match: E6ZES6_ECTSI (Cytochrome c oxidase subunit 1 n=691 Tax=Phaeophyceae TaxID=2870 RepID=E6ZES6_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 1.020e-44
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0

Query:    1 MHFLGLAGMPRRIPDYPDSYAGWNGIASFGSILSSLASLFFFFVVYVTLTKGSVEEANPWVKGRGLAFPVLTQVSAK 77
            MHFLGLAGMPRRIPDYPDSYAGWNGIASFGSILSSLASLFFFFVVYVTLTKGSVEEANPWVKGRGLAFP LTQVSAK
Sbjct:  454 MHFLGLAGMPRRIPDYPDSYAGWNGIASFGSILSSLASLFFFFVVYVTLTKGSVEEANPWVKGRGLAFPALTQVSAK 530

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BLAST of mRNA_E-siliculosus-1a_M_contig721.15435.1 vs. uniprot
Match: A0A0U5ACT6_9PHAE (Cytochrome oxidase subunit 1 (Fragment) n=1 Tax=Stschapovia flagellaris TaxID=243166 RepID=A0A0U5ACT6_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 3.050e-44
Identity = 66/77 (85.71%), Postives = 73/77 (94.81%), Query Frame = 0

Query:    1 MHFLGLAGMPRRIPDYPDSYAGWNGIASFGSILSSLASLFFFFVVYVTLTKGSVEEANPWVKGRGLAFPVLTQVSAK 77
            MHFLGL+GMPRRIPDYPDSYAGWNG+ASFGSILSS+ASL FFF+VY+TLTKGSVEEANPW+KGRGLAFP L +VS K
Sbjct:   10 MHFLGLSGMPRRIPDYPDSYAGWNGLASFGSILSSIASLLFFFIVYLTLTKGSVEEANPWIKGRGLAFPALPRVSPK 86

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BLAST of mRNA_E-siliculosus-1a_M_contig721.15435.1 vs. uniprot
Match: A0A0S2I710_SACJA (Cytochrome c oxidase subunit 1 n=14 Tax=Saccharina japonica TaxID=88149 RepID=A0A0S2I710_SACJA)

HSP 1 Score: 149 bits (375), Expect = 8.540e-41
Identity = 68/77 (88.31%), Postives = 75/77 (97.40%), Query Frame = 0

Query:    1 MHFLGLAGMPRRIPDYPDSYAGWNGIASFGSILSSLASLFFFFVVYVTLTKGSVEEANPWVKGRGLAFPVLTQVSAK 77
            MHFLGLAGMPRRIPDYPDSYAGWNG+ASFGSILSS+ASLFFFFVVY+TLT+GSVEE+NPWVKGRGLAFPVL + S+K
Sbjct:  453 MHFLGLAGMPRRIPDYPDSYAGWNGLASFGSILSSIASLFFFFVVYITLTRGSVEESNPWVKGRGLAFPVLPRRSSK 529

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BLAST of mRNA_E-siliculosus-1a_M_contig721.15435.1 vs. uniprot
Match: A0A0U4ZTN0_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=8 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U4ZTN0_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 2.970e-38
Identity = 63/74 (85.14%), Postives = 71/74 (95.95%), Query Frame = 0

Query:    1 MHFLGLAGMPRRIPDYPDSYAGWNGIASFGSILSSLASLFFFFVVYVTLTKGSVEEANPWVKGRGLAFPVLTQV 74
            MHFLGLAGMPRRIPDYPDSYAGWNG+ASFGSILSS+ASLFFFFVVY+TLT+GSVE++NPWV GRGLAFP L ++
Sbjct:  350 MHFLGLAGMPRRIPDYPDSYAGWNGVASFGSILSSIASLFFFFVVYLTLTQGSVEKSNPWVSGRGLAFPSLAKM 423

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BLAST of mRNA_E-siliculosus-1a_M_contig721.15435.1 vs. uniprot
Match: A0A8E8PDM6_9PHAE (Cytochrome c oxidase subunit 1 n=2 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8PDM6_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 4.340e-37
Identity = 64/77 (83.12%), Postives = 70/77 (90.91%), Query Frame = 0

Query:    1 MHFLGLAGMPRRIPDYPDSYAGWNGIASFGSILSSLASLFFFFVVYVTLTKGSVEEANPWVKGRGLAFPVLTQVSAK 77
            MHFLGLAGMPRRIPDYPD+YAGWN IASFGSILSS+ASLFFFFVVY+TLT+GSVEE+NPWVKGRGLAF  +  V  K
Sbjct:  446 MHFLGLAGMPRRIPDYPDAYAGWNSIASFGSILSSIASLFFFFVVYITLTQGSVEESNPWVKGRGLAFSPIPDVLLK 522

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BLAST of mRNA_E-siliculosus-1a_M_contig721.15435.1 vs. uniprot
Match: A0A5K7TLP3_9PHAE (Cytochrome c oxidase subunit 1 n=55 Tax=Phaeophyceae TaxID=2870 RepID=A0A5K7TLP3_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 9.460e-36
Identity = 61/72 (84.72%), Postives = 68/72 (94.44%), Query Frame = 0

Query:    1 MHFLGLAGMPRRIPDYPDSYAGWNGIASFGSILSSLASLFFFFVVYVTLTKGSVEEANPWVKGRGLAFPVLT 72
            MHFLGLAGMPRRIPDYPDS+ GWN +ASFGSILSSLAS+FFF+VVYVTLT+GSVEE+NPWVKGRGLAF + T
Sbjct:  458 MHFLGLAGMPRRIPDYPDSFGGWNAVASFGSILSSLASIFFFYVVYVTLTRGSVEESNPWVKGRGLAFMIPT 529

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BLAST of mRNA_E-siliculosus-1a_M_contig721.15435.1 vs. uniprot
Match: A0A6N3IW01_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=2 Tax=Ecklonia arborea TaxID=1849970 RepID=A0A6N3IW01_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 1.380e-35
Identity = 58/75 (77.33%), Postives = 66/75 (88.00%), Query Frame = 0

Query:    1 MHFLGLAGMPRRIPDYPDSYAGWNGIASFGSILSSLASLFFFFVVYVTLTKGSVEEANPWVKGRGLAFPVLTQVS 75
            MHFLGLAGMPRRIPDYPD YAGWNG+ASFGSILSS+ASL FFF+VY+TLT+G VE +NPWVK R  AFP+L + S
Sbjct:  131 MHFLGLAGMPRRIPDYPDCYAGWNGLASFGSILSSVASLLFFFIVYITLTRGYVEGSNPWVKDRKFAFPLLPRRS 205

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BLAST of mRNA_E-siliculosus-1a_M_contig721.15435.1 vs. uniprot
Match: A0A0U1XAH8_SARHM (Cytochrome c oxidase subunit 1 n=118 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U1XAH8_SARHM)

HSP 1 Score: 133 bits (334), Expect = 6.090e-35
Identity = 58/75 (77.33%), Postives = 68/75 (90.67%), Query Frame = 0

Query:    1 MHFLGLAGMPRRIPDYPDSYAGWNGIASFGSILSSLASLFFFFVVYVTLTKGSVEEANPWVKGRGLAFPVLTQVS 75
            MHFLGLAGMPRRIPDYPDSYAGWN +ASFGSILSS+ASLFFF++VY+TLT+G +EE+NPWVK RG+AFP +   S
Sbjct:  453 MHFLGLAGMPRRIPDYPDSYAGWNSVASFGSILSSVASLFFFYIVYLTLTEGHLEESNPWVKNRGIAFPTIESKS 527

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BLAST of mRNA_E-siliculosus-1a_M_contig721.15435.1 vs. uniprot
Match: A0A8F0K0Q8_9PHAE (Cytochrome c oxidase subunit 1 n=5 Tax=Laminariales TaxID=2886 RepID=A0A8F0K0Q8_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 4.580e-33
Identity = 58/77 (75.32%), Postives = 70/77 (90.91%), Query Frame = 0

Query:    1 MHFLGLAGMPRRIPDYPDSYAGWNGIASFGSILSSLASLFFFFVVYVTLTKGSVEEANPWVKGRGLAFPVLTQVSAK 77
            MHFLGLAGMPRR+PDYPDS+ GWN +ASFGSILSS+ASLFFFFVVY+TLT+GSV ++N WV+GRGLAFP L + S++
Sbjct:  453 MHFLGLAGMPRRVPDYPDSFFGWNALASFGSILSSVASLFFFFVVYITLTQGSVVKSNYWVEGRGLAFPPLPRRSSQ 529

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BLAST of mRNA_E-siliculosus-1a_M_contig721.15435.1 vs. uniprot
Match: A0A650AKK5_9CHLO (Cytochrome c oxidase subunit 1 n=1 Tax=prasinophyte sp. MBIC10622 TaxID=156113 RepID=A0A650AKK5_9CHLO)

HSP 1 Score: 102 bits (255), Expect = 7.410e-24
Identity = 49/71 (69.01%), Postives = 54/71 (76.06%), Query Frame = 0

Query:    1 MHFLGLAGMPRRIPDYPDSYAGWNGIASFGSILSSLASLFFFFVVYVTLTKGSVEEANPWVKGRGLAFPVL 71
            MHFLGLAGMPRRIPDYPD+YAGWN IAS+GS LS L ++FFF+VVY TLT   V E NPW  G G   P L
Sbjct:  431 MHFLGLAGMPRRIPDYPDAYAGWNAIASYGSYLSVLGAIFFFYVVYKTLTSEEVCERNPW--GEGDQSPTL 499

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig721.15435.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig721.15435.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
E6ZES6_ECTSI	1.020e-44	98.70	Cytochrome c oxidase subunit 1 n=691 Tax=Phaeophyc...	[more]
A0A0U5ACT6_9PHAE	3.050e-44	85.71	Cytochrome oxidase subunit 1 (Fragment) n=1 Tax=St...	[more]
A0A0S2I710_SACJA	8.540e-41	88.31	Cytochrome c oxidase subunit 1 n=14 Tax=Saccharina...	[more]
A0A0U4ZTN0_9PHAE	2.970e-38	85.14	Cytochrome c oxidase subunit 1 (Fragment) n=8 Tax=...	[more]
A0A8E8PDM6_9PHAE	4.340e-37	83.12	Cytochrome c oxidase subunit 1 n=2 Tax=Phaeophycea...	[more]
A0A5K7TLP3_9PHAE	9.460e-36	84.72	Cytochrome c oxidase subunit 1 n=55 Tax=Phaeophyce...	[more]
A0A6N3IW01_9PHAE	1.380e-35	77.33	Cytochrome c oxidase subunit 1 (Fragment) n=2 Tax=...	[more]
A0A0U1XAH8_SARHM	6.090e-35	77.33	Cytochrome c oxidase subunit 1 n=118 Tax=Phaeophyc...	[more]
A0A8F0K0Q8_9PHAE	4.580e-33	75.32	Cytochrome c oxidase subunit 1 n=5 Tax=Laminariale...	[more]
A0A650AKK5_9CHLO	7.410e-24	69.01	Cytochrome c oxidase subunit 1 n=1 Tax=prasinophyt...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036927	Cytochrome c oxidase-like, subunit I superfamily	GENE3D	1.20.210.10		coord: 1..74 e-value: 2.1E-19 score: 71.3
IPR036927	Cytochrome c oxidase-like, subunit I superfamily	SUPERFAMILY	81442	Cytochrome c oxidase subunit I-like	coord: 1..64
IPR000883	Cytochrome c oxidase subunit I	PANTHER	PTHR10422	CYTOCHROME C OXIDASE SUBUNIT 1	coord: 1..62
None	No IPR available	PANTHER	PTHR10422:SF6		coord: 1..62
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 50..77
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..49
None	No IPR available	TMHMM	TMhelix		coord: 25..47
IPR023616	Cytochrome c oxidase-like, subunit I domain	PROSITE	PS50855	COX1	coord: 1..77 score: 10.593

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig721	contig	E-siliculosus-1a_M_contig721:11726..11959 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig721.15435.1	mRNA_E-siliculosus-1a_M_contig721.15435.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig721 11726..11986 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig721.15435.1 ID=prot_E-siliculosus-1a_M_contig721.15435.1|Name=mRNA_E-siliculosus-1a_M_contig721.15435.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=78bp
MHFLGLAGMPRRIPDYPDSYAGWNGIASFGSILSSLASLFFFFVVYVTLT
KGSVEEANPWVKGRGLAFPVLTQVSAK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023616	Cyt_c_oxase-like_su1_dom
IPR000883	Cyt_C_Oxase_1
IPR036927	Cyt_c_oxase-like_su1_sf