prot_E-siliculosus-1a_M_contig72.15424.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig72.15424.1
Unique Nameprot_E-siliculosus-1a_M_contig72.15424.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length189
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig72.15424.1 vs. uniprot
Match: A0A6H5KXF6_9PHAE (YjgF_endoribonc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXF6_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 1.370e-60
Identity = 103/117 (88.03%), Postives = 107/117 (91.45%), Query Frame = 0
Query:    1 MIASAAARVGAKSRTSLARCCRAVHVEAHLESKGIKLPKAIVPPQGSYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGDNITEEEGVAAAHLVALNMLATLKCE--GFDRRVYIIGL 115
            MIASAAARVGAKSRTSL RCCRAVHVEAHLESKGIKLPKAIVPPQGSYVVAYQTGKTLY+SGHIPMTPEGVLLTGTVGD+ITEEEGVAAAHLVALNMLATLK +    DR   I+ L
Sbjct:    4 MIASAAARVGAKSRTSLGRCCRAVHVEAHLESKGIKLPKAIVPPQGSYVVAYQTGKTLYVSGHIPMTPEGVLLTGTVGDSITEEEGVAAAHLVALNMLATLKYQLGDLDRVARIVKL 120          
BLAST of mRNA_E-siliculosus-1a_M_contig72.15424.1 vs. uniprot
Match: A0A812PJA3_9DINO (TCP17 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812PJA3_9DINO)

HSP 1 Score: 77.4 bits (189), Expect = 2.410e-14
Identity = 44/103 (42.72%), Postives = 65/103 (63.11%), Query Frame = 0
Query:    5 AAARVGAKSRTSLARCCRAVHVEAHLESKGIKLPKAIVPP---QGSYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGDNITEEEGVAAAHLVALNMLATLKCE 104
            A ARV  ++   L  C   VH EA LE  G++LP    PP   Q +Y+++ ++G T++ +GH+PM  +G L++G VG ++  EE  AAA LV LN+L+TLK E
Sbjct:   12 ACARVMPRAVARLGAC--GVHTEAKLEELGLELP----PPGKAQANYILSVRSGDTIFTAGHLPMMHDGTLMSGKVGVDLNTEEAYAAAELVGLNILSTLKAE 108          
BLAST of mRNA_E-siliculosus-1a_M_contig72.15424.1 vs. uniprot
Match: A0A4P5WJN3_9BACT (YjgF_endoribonc domain-containing protein n=4 Tax=Planctomycetia TaxID=203683 RepID=A0A4P5WJN3_9BACT)

HSP 1 Score: 76.6 bits (187), Expect = 2.860e-14
Identity = 48/118 (40.68%), Postives = 65/118 (55.08%), Query Frame = 0
Query:   13 SRTSLARCCRAVHVEAHLESKGIKLPKAIVPPQGSYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGDNITEEEGVAAAHLVALNMLATLKC-----EGFDRRVYIIGLVFTSNQRSQH 125
            S   L R   AV VEA L   GI LP A  PP G Y       +  Y+SG +P  P+G L+TG VG  +TEE+G AAA +VAL MLAT++      +   R V ++G+V ++    +H
Sbjct:    4 SYPELIRKVIAVSVEARLVELGITLP-APPPPGGVYTPVVIVDRLAYVSGQVPYGPDGKLVTGRVGSELTEEQGAAAARVVALTMLATIRASLGSLDRVKRIVKVLGMVNSTADFQRH 120          
BLAST of mRNA_E-siliculosus-1a_M_contig72.15424.1 vs. uniprot
Match: A0A3B9D0R4_9PLAN (YjgF_endoribonc domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3B9D0R4_9PLAN)

HSP 1 Score: 73.6 bits (179), Expect = 3.120e-13
Identity = 42/105 (40.00%), Postives = 59/105 (56.19%), Query Frame = 0
Query:   26 VEAHLESKGIKLPKAIVPPQGSYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGDNITEEEGVAAAHLVALNMLATLKCE-----GFDRRVYIIGLVFTSNQRSQH 125
            +EA +E  G+ LP A  PP G+Y          Y+SG  P T EG  LTG VGD++TEE+G+ AA +V L MLAT+K +        R V ++G+V ++     H
Sbjct:    3 IEARIEELGLTLPDA-PPPGGNYSPVVVVDGMAYVSGQGPWTTEGTYLTGKVGDDLTEEQGIEAARVVGLTMLATIKAQLGSLDRVKRVVKVLGMVNSTPDFGTH 106          
BLAST of mRNA_E-siliculosus-1a_M_contig72.15424.1 vs. uniprot
Match: A0A2D0N357_9BACT (YjgF_endoribonc domain-containing protein n=1 Tax=Flavilitoribacter nigricans DSM 23189 = NBRC 102662 TaxID=1122177 RepID=A0A2D0N357_9BACT)

HSP 1 Score: 73.9 bits (180), Expect = 5.010e-13
Identity = 44/105 (41.90%), Postives = 62/105 (59.05%), Query Frame = 0
Query:   26 VEAHLESKGIKLPKAIVPPQGSYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGDNITEEEGVAAAHLVALNMLATLKCEGFD-----RRVYIIGLVFTSNQRSQH 125
            VEA L   GI LP+ + PP  +YV A QTG  ++++G  P  PEG  +TG +G ++TEEEG AAA   A+  LA LK E  D     R V ++G+V  + + + H
Sbjct:   43 VEAKLAELGITLPE-VSPPVANYVNAVQTGNLIFMAGKGPSKPEGGYITGKLGQDLTEEEGYAAARQAAIVQLAALKAEIGDLNRVKRVVKVLGMVNATPEFTNH 146          
BLAST of mRNA_E-siliculosus-1a_M_contig72.15424.1 vs. uniprot
Match: A0A7S1YXV5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YXV5_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 9.070e-13
Identity = 45/113 (39.82%), Postives = 67/113 (59.29%), Query Frame = 0
Query:   22 RAVHVEAHLESKGIKLPKAIVPPQGSYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGDN---ITEEEGVAAAHLVALNMLATLK-----CEGFDRRVYIIGLV-FTSNQRSQH 125
            R++H+E  L+   I LP    P     +V + +   LYISGH+P+T +G LLTG VGD+    + EEG AAA L ALNM++T+K      +  ++ V + G+V  T + +SQH
Sbjct:   29 RSIHIEKKLKDLKITLPPPPQPKANYNIVCHASSNMLYISGHLPITNDGELLTGVVGDDGDGKSIEEGYAAARLAALNMVSTMKEQLGDLDRVEQVVKVFGIVNSTVDFKSQH 141          
BLAST of mRNA_E-siliculosus-1a_M_contig72.15424.1 vs. uniprot
Match: A0A2E3PUX1_9RHOB (YjgF_endoribonc domain-containing protein n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E3PUX1_9RHOB)

HSP 1 Score: 72.0 bits (175), Expect = 1.230e-12
Identity = 42/93 (45.16%), Postives = 55/93 (59.14%), Query Frame = 0
Query:   26 VEAHLESKGIKLPKAIVPPQGSYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGDNITEEEGVAAAHLVALNMLATLKCE--GFDRRVYIIGLV 116
            +E H+ S GI LPKA  P   +YV   QTG  L+ISG IPM P G+   G +GD+ + E G AAA L A+N+LA  K      DR V ++ +V
Sbjct:    5 IENHISSLGITLPKAAAPA-ANYVPYVQTGNQLFISGQIPMGPNGIEHQGKLGDDYSLENGQAAAKLCAINLLAQAKAALGDLDRIVRLVKIV 96          
BLAST of mRNA_E-siliculosus-1a_M_contig72.15424.1 vs. uniprot
Match: A0A1M7FKT9_9HYPH (Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family n=2 Tax=Roseibium TaxID=150830 RepID=A0A1M7FKT9_9HYPH)

HSP 1 Score: 71.2 bits (173), Expect = 2.410e-12
Identity = 42/96 (43.75%), Postives = 57/96 (59.38%), Query Frame = 0
Query:   26 VEAHLESKGIKLPKAIVPPQGSYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGDNITEEEGVAAAHLVALNMLATLKCEGFD-----RRVYIIGLV 116
            VE+ L S G+ LP    P   +YV   QTG+ L+ISG +PM P+G+   G VGD+++ E+G AAA L A+N+LA  K    D     R V I+G V
Sbjct:    5 VESRLASMGVILPTPATPV-ANYVPFVQTGQQLFISGQLPMNPDGLQYAGKVGDSLSLEQGRAAARLCAINLLAQAKAATGDLEKIVRLVKIVGFV 99          
BLAST of mRNA_E-siliculosus-1a_M_contig72.15424.1 vs. uniprot
Match: A0A846N3A8_9PROT (Enamine deaminase RidA (YjgF/YER057c/UK114 family) n=1 Tax=Rhizomicrobium palustre TaxID=189966 RepID=A0A846N3A8_9PROT)

HSP 1 Score: 70.9 bits (172), Expect = 3.460e-12
Identity = 40/89 (44.94%), Postives = 59/89 (66.29%), Query Frame = 0
Query:   26 VEAHLESKGIKLPKAIVPPQ--GSYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGDNITEEEGVAAAHLVALNMLATLK--CEGFDRRV 110
            +EA L+  GI+LP   VPP    SYV A ++G T+++SG IP+T EG+   G VG +++ E+G AAA L A+N++A +K  C+G   RV
Sbjct:    5 IEARLKDLGIELP---VPPAPVASYVAAVKSGSTVFLSGQIPVTTEGLKYVGIVGQDLSVEDGRAAARLCAINLIAQIKAACDGDLDRV 90          
BLAST of mRNA_E-siliculosus-1a_M_contig72.15424.1 vs. uniprot
Match: A0A1P8WPL4_9PLAN (Putative endoribonuclease L-PSP n=1 Tax=Fuerstiella marisgermanici TaxID=1891926 RepID=A0A1P8WPL4_9PLAN)

HSP 1 Score: 70.5 bits (171), Expect = 4.630e-12
Identity = 42/104 (40.38%), Postives = 59/104 (56.73%), Query Frame = 0
Query:   27 EAHLESKGIKLPKAIVPPQGSYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGDNITEEEGVAAAHLVALNMLATLKCE-----GFDRRVYIIGLVFTSNQRSQH 125
            EA +   G+ LP+A  P  G+Y          Y+SG  P+ P+G  LTG VGD++TEEEGVAAA +V L MLAT+K +        R V ++G+V ++     H
Sbjct:    4 EARIAELGLTLPEA-PPAGGTYSPVLVVNGMAYVSGQGPVGPDGNYLTGRVGDDLTEEEGVAAARVVGLTMLATIKAQLGSLDKVKRVVKVLGMVNSTPDFKTH 106          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig72.15424.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXF6_9PHAE1.370e-6088.03YjgF_endoribonc domain-containing protein n=2 Tax=... [more]
A0A812PJA3_9DINO2.410e-1442.72TCP17 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A4P5WJN3_9BACT2.860e-1440.68YjgF_endoribonc domain-containing protein n=4 Tax=... [more]
A0A3B9D0R4_9PLAN3.120e-1340.00YjgF_endoribonc domain-containing protein n=1 Tax=... [more]
A0A2D0N357_9BACT5.010e-1341.90YjgF_endoribonc domain-containing protein n=1 Tax=... [more]
A0A7S1YXV5_9STRA9.070e-1339.82Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A2E3PUX1_9RHOB1.230e-1245.16YjgF_endoribonc domain-containing protein n=4 Tax=... [more]
A0A1M7FKT9_9HYPH2.410e-1243.75Enamine deaminase RidA, house cleaning of reactive... [more]
A0A846N3A8_9PROT3.460e-1244.94Enamine deaminase RidA (YjgF/YER057c/UK114 family)... [more]
A0A1P8WPL4_9PLAN4.630e-1240.38Putative endoribonuclease L-PSP n=1 Tax=Fuerstiell... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035959RutC-like superfamilyGENE3D3.30.1330.40coord: 17..135
e-value: 8.8E-21
score: 76.0
IPR035959RutC-like superfamilySUPERFAMILY55298YjgF-likecoord: 25..107
NoneNo IPR availablePANTHERPTHR43760FAMILY NOT NAMEDcoord: 23..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig72contigE-siliculosus-1a_M_contig72:760901..762742 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig72.15424.1mRNA_E-siliculosus-1a_M_contig72.15424.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig72 758339..762793 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig72.15424.1 ID=prot_E-siliculosus-1a_M_contig72.15424.1|Name=mRNA_E-siliculosus-1a_M_contig72.15424.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=189bp
MIASAAARVGAKSRTSLARCCRAVHVEAHLESKGIKLPKAIVPPQGSYVV
AYQTGKTLYISGHIPMTPEGVLLTGTVGDNITEEEGVAAAHLVALNMLAT
LKCEGFDRRVYIIGLVFTSNQRSQHSCRLLQPAVTQKSSSPRGPLPTPPA
VYTLPSIFNARKSAAFSSRVCITFLLVCVRHTGGTRVP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035959RutC-like_sf