prot_E-siliculosus-1a_M_contig72.15412.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig72.15412.1
Unique Nameprot_E-siliculosus-1a_M_contig72.15412.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length148
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig72.15412.1 vs. uniprot
Match: A0A835YQE8_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQE8_9STRA)

HSP 1 Score: 135 bits (339), Expect = 6.760e-34
Identity = 67/135 (49.63%), Postives = 94/135 (69.63%), Query Frame = 0 
Query:   10 VQNQFAVVLSWDEVRALQKLYGDPDSESIDFMKFAVALGKSPGHGPDKSRRAYNFLPKHTTEYDLKAIEKKIMHKLEDRCEVAGNYQYQWARRMLCDSTSTLAGGMDKEQLKLRLSGLLGVELSDGEMDVLFRKY 144
            V++QFA+ L+ +E+ ALQ  Y      ++DF++FA AL K+P +G D++R  +NFLP      DL+ +E+ +  K+ DR  +AGNYQYQ A RMLCD+   LAGGM +E LKLR+S LLGVE++D E+D LF KY
Sbjct:    2 VESQFALALTVEEMVALQTRYPGNQPGTVDFLQFAEALSKTPQYGLDRTRGCFNFLPASKGNRDLQGLERDMRQKITDRLHLAGNYQYQSAYRMLCDANYQLAGGMGREDLKLRVSELLGVEINDREVDALFSKY 136
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig72.15412.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YQE8_9STRA6.760e-3449.63EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig72contigE-siliculosus-1a_M_contig72:684302..685935 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig72.15412.1mRNA_E-siliculosus-1a_M_contig72.15412.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig72 684302..685935 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig72.15412.1 ID=prot_E-siliculosus-1a_M_contig72.15412.1|Name=mRNA_E-siliculosus-1a_M_contig72.15412.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=148bp
MSMDEFKRQVQNQFAVVLSWDEVRALQKLYGDPDSESIDFMKFAVALGKS
PGHGPDKSRRAYNFLPKHTTEYDLKAIEKKIMHKLEDRCEVAGNYQYQWA
RRMLCDSTSTLAGGMDKEQLKLRLSGLLGVELSDGEMDVLFRKYADP*
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