prot_E-siliculosus-1a_M_contig72.15398.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig72.15398.1
Unique Nameprot_E-siliculosus-1a_M_contig72.15398.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length114
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig72.15398.1 vs. uniprot
Match: A0A6H5KBW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW6_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 3.220e-43
Identity = 69/77 (89.61%), Postives = 70/77 (90.91%), Query Frame = 0 
Query:    2 RFQLNEEHVTPARPWNRQPDGGXXXXXXRNLVTVSLGDSGELDGYVVASTTCAPNGRPTVETVEVRQLTDRGLTHVQ 78
            RFQLNEEH+TPARPWNRQPDGG      RNLVTVSLGDSGELDGYVVASTTCAPNG PTVETVEVRQLTDRGLTHVQ
Sbjct:    3 RFQLNEEHITPARPWNRQPDGGGSGGGGRNLVTVSLGDSGELDGYVVASTTCAPNGTPTVETVEVRQLTDRGLTHVQ 79
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BLAST of mRNA_E-siliculosus-1a_M_contig72.15398.1 vs. uniprot
Match: D8LID1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LID1_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 7.310e-36
Identity = 71/106 (66.98%), Postives = 77/106 (72.64%), Query Frame = 0 
Query:    2 RFQLNEEHVTPARPWNRQPDGGXXXXXXRNLVTVSLGDSGELDGYVVASTTCAPNGRPTVETVEVRQLTDRGLTHVQQISVKNLLTGGQSAVMRTWARVPMTGEDH 107
            RF+L+EE VTPARPWNR   GGXXXXXX N VTVSLG+S +LDGYVVA+TT APNGRPTVETVEVRQLTD GLTH+Q                R W RVPMT ED 
Sbjct:   45 RFELDEEQVTPARPWNRPQHGGXXXXXXVNQVTVSLGESEQLDGYVVATTTSAPNGRPTVETVEVRQLTDGGLTHIQXXXXXXXXXXXXXXXXRVWVRVPMTHEDQ 150
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig72.15398.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KBW6_9PHAE3.220e-4389.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LID1_ECTSI7.310e-3666.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig72contigE-siliculosus-1a_M_contig72:491186..492207 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig72.15398.1mRNA_E-siliculosus-1a_M_contig72.15398.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig72 491186..492207 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig72.15398.1 ID=prot_E-siliculosus-1a_M_contig72.15398.1|Name=mRNA_E-siliculosus-1a_M_contig72.15398.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=114bp
FRFQLNEEHVTPARPWNRQPDGGGGGGGGRNLVTVSLGDSGELDGYVVAS
TTCAPNGRPTVETVEVRQLTDRGLTHVQQISVKNLLTGGQSAVMRTWARV
PMTGEDHLRLLAA*
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