prot_E-siliculosus-1a_M_contig72.15393.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig72.15393.1
Unique Name	prot_E-siliculosus-1a_M_contig72.15393.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	162

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig72.15393.1 vs. uniprot
Match: A0A6H5JNP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNP0_9PHAE)

HSP 1 Score: 236 bits (602), Expect = 2.020e-77
Identity = 143/161 (88.82%), Postives = 144/161 (89.44%), Query Frame = 0

Query:    1 MAVSGAVRALVSALLVAFAVEAFVVPAPAALARDLGRPSNKQQLTPTPNTAATSSRSLTPARMSTYEQSSPEPSXXXXXXXXSEMELQELIVDFTDDGRILLEVKGVKGSECRVITEDLIKALGDVITTENTEEYFQERVVNTQKDAVQLGWSYDASKPEW 161
            MAVSGAVRALV ALLVAFAVEAFVVPAPAALAR+LGRPSN QQLTPTPNTAATSSRSLT A             XXXXXXXX EMELQELIVDFTDDGRILLEVKGVKGSECRVITEDLIKALGDVITTENTEEYFQERVVNTQKDAVQLGWSYDASKPEW
Sbjct:    1 MAVSGAVRALVFALLVAFAVEAFVVPAPAALARNLGRPSNTQQLTPTPNTAATSSRSLTRAXXXXXXXXXXXXXXXXXXXXXPEMELQELIVDFTDDGRILLEVKGVKGSECRVITEDLIKALGDVITTENTEEYFQERVVNTQKDAVQLGWSYDASKPEW 161

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BLAST of mRNA_E-siliculosus-1a_M_contig72.15393.1 vs. uniprot
Match: D8LID7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LID7_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 1.530e-54
Identity = 90/99 (90.91%), Postives = 91/99 (91.92%), Query Frame = 0

Query:   63 MSTYEQSSPEPSXXXXXXXXSEMELQELIVDFTDDGRILLEVKGVKGSECRVITEDLIKALGDVITTENTEEYFQERVVNTQKDAVQLGWSYDASKPEW 161
            MSTYEQSSPEPS        SEMELQELIVDFTDDGRILLEVKGVKGSECRVITEDLIKALGDVITTENTEEYFQE+VVNTQKDAVQLGWSYDASKPEW
Sbjct:    1 MSTYEQSSPEPSASGEMSSSSEMELQELIVDFTDDGRILLEVKGVKGSECRVITEDLIKALGDVITTENTEEYFQEKVVNTQKDAVQLGWSYDASKPEW 99

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig72.15393.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig72.15393.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JNP0_9PHAE	2.020e-77	88.82	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LID7_ECTSI	1.530e-54	90.91	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021375	Protein of unknown function DUF2997	PFAM	PF11211	DUF2997	coord: 95..136 e-value: 1.7E-12 score: 46.9
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 21..32
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 9..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..8
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 33..161
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..32
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..22 score: 0.743
None	No IPR available	TMHMM	TMhelix		coord: 10..32

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig72	contig	E-siliculosus-1a_M_contig72:454994..458454 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig72.15393.1	mRNA_E-siliculosus-1a_M_contig72.15393.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig72 453931..458454 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig72.15393.1 ID=prot_E-siliculosus-1a_M_contig72.15393.1|Name=mRNA_E-siliculosus-1a_M_contig72.15393.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=162bp
MAVSGAVRALVSALLVAFAVEAFVVPAPAALARDLGRPSNKQQLTPTPNT
AATSSRSLTPARMSTYEQSSPEPSASGEMSSSSEMELQELIVDFTDDGRI
LLEVKGVKGSECRVITEDLIKALGDVITTENTEEYFQERVVNTQKDAVQL
GWSYDASKPEW*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR021375	DUF2997