prot_E-siliculosus-1a_M_contig72.15389.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig72.15389.1
Unique Nameprot_E-siliculosus-1a_M_contig72.15389.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length184
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig72.15389.1 vs. uniprot
Match: A0A6H5KJ84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ84_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 3.350e-54
Identity = 96/109 (88.07%), Postives = 100/109 (91.74%), Query Frame = 0 
Query:   75 MAAFLRDENCTQADFAAVLTRAHAEGALGKESLGSLVIETMTAVDDFESFTNFMNNAVAAEDEDDSDGAPENAAVQDGEEESKRCRLESDGSDGSNEGAPETAARRRRK 183
            MAAFLRDENCTQADFAAVLTRAHAEGALGKESLGSLVIETMTAVD+FESFTNFMNN VA E ED+SDGAP+   VQDGEEESKRCRLESDGSDGSNEGA +TA R RRK
Sbjct:    1 MAAFLRDENCTQADFAAVLTRAHAEGALGKESLGSLVIETMTAVDEFESFTNFMNNTVAGEHEDNSDGAPDYTTVQDGEEESKRCRLESDGSDGSNEGAADTAVRSRRK 109
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig72.15389.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJ84_9PHAE3.350e-5488.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042541BART domain superfamilyGENE3D1.20.58.1900coord: 64..135
e-value: 1.1E-5
score: 27.1
IPR023379BART domainPFAMPF11527ARL2_Bind_BARTcoord: 66..129
e-value: 3.3E-5
score: 24.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig72contigE-siliculosus-1a_M_contig72:435270..438277 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig72.15389.1mRNA_E-siliculosus-1a_M_contig72.15389.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig72 435270..438277 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig72.15389.1 ID=prot_E-siliculosus-1a_M_contig72.15389.1|Name=mRNA_E-siliculosus-1a_M_contig72.15389.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=184bp
MDDCTYYRLLNSCVDHFLEVLGPRLDRWAETKARRWKDNVEDEQVIEDEG
HAHWQARTLRRLKKRAFIKLFEQVMAAFLRDENCTQADFAAVLTRAHAEG
ALGKESLGSLVIETMTAVDDFESFTNFMNNAVAAEDEDDSDGAPENAAVQ
DGEEESKRCRLESDGSDGSNEGAPETAARRRRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023379BART_dom
IPR042541BART_sf