prot_E-siliculosus-1a_M_contig72.15385.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig72.15385.1
Unique Nameprot_E-siliculosus-1a_M_contig72.15385.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length65
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig72.15385.1 vs. uniprot
Match: D8LIE1_ECTSI (Rhodanese Homology Domain superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIE1_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 2.520e-33
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 
Query:    1 MDRRLMKRTGLVLCDPQALGGGRAAARSMVARAAEVKGSVEHARVPGAGPSGGLHVFKWKTYSH 64
            MDRRLMKRTGLVLCDPQALGGGRAAARSMVARAAEVKGSVEHARVPGAGPSGGLHVFKWKTYSH
Sbjct:  811 MDRRLMKRTGLVLCDPQALGGGRAAARSMVARAAEVKGSVEHARVPGAGPSGGLHVFKWKTYSH 874
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BLAST of mRNA_E-siliculosus-1a_M_contig72.15385.1 vs. uniprot
Match: A0A6H5L4H6_9PHAE (Rhodanese domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H6_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 3.650e-31
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 
Query:    4 RLMKRTGLVLCDPQALGGGRAAARSMVARAAEVKGSVEHARVPGAGPSGGLHVFKWKTYSH 64
            RLMKRTGLVLCDPQALGGGRAAARSMVARAAEVKGSVEHARVPGAGPSGGLHVFKWKTYSH
Sbjct:  830 RLMKRTGLVLCDPQALGGGRAAARSMVARAAEVKGSVEHARVPGAGPSGGLHVFKWKTYSH 890
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig72.15385.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIE1_ECTSI2.520e-33100.00Rhodanese Homology Domain superfamily n=1 Tax=Ecto... [more]
A0A6H5L4H6_9PHAE3.650e-31100.00Rhodanese domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig72contigE-siliculosus-1a_M_contig72:409911..410507 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig72.15385.1mRNA_E-siliculosus-1a_M_contig72.15385.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig72 409319..410579 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig72.15385.1 ID=prot_E-siliculosus-1a_M_contig72.15385.1|Name=mRNA_E-siliculosus-1a_M_contig72.15385.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=65bp
MDRRLMKRTGLVLCDPQALGGGRAAARSMVARAAEVKGSVEHARVPGAGP
SGGLHVFKWKTYSH*
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