prot_E-siliculosus-1a_M_contig72.15374.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig72.15374.1
Unique Nameprot_E-siliculosus-1a_M_contig72.15374.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length484
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig72.15374.1 vs. uniprot
Match: A0A6H5JAH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAH0_9PHAE)

HSP 1 Score: 615 bits (1587), Expect = 5.860e-217
Identity = 420/483 (86.96%), Postives = 427/483 (88.41%), Query Frame = 0 
Query:    1 MQWSKRATTPATTASASKPSSAGKRERWWRVLESAKWELGSEPRHQQTGTRLRPGRWLLSAWRKTAHQFRSNMRWGSLSYVARAWEEQSTTTDICRAAEGRAKADSSTCSNNNEAIQGPENAGGTDATNSAMVASFLRRRAPQGLAFALVAATVYVVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTGDVAERVDDTRPGLAQQFGEDXXXXXXXXXXXXXXXXXXXXXXXXXGEEGIRKGTSERDEPGPTACPSPEHDREGNDGGKATHAGVRTDGQQQGDVSSDGAIQGGGQPGHSVEEQDSALARMSRGQPLLSESSTEDILAEADHLIADAANNTFNSSRATTTPTKPRAGKPRATSKATGPTQAARRKSKDPPRGTSSPKPTLTRMTSASRSSDTRSPKRPRVYPEVSGEEVDALVSLTQRALERDPSALSEIAKDASLQQGGDK 483
            MQWSKRAT PATTASASKPSSAGKRE W RVLESAKWELGSEPR QQTGTRLR GRWLLSAWRKTAHQFRSNMRWGSLSY+ARAWEEQSTTTDIC AA+GRAKADSSTCSNNNEAIQGPENAGGTDATN A+VASFLRRRAPQGLAFALV ATVYVVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  DT DVAER +DTRPGLA++  ED                         GEEG RKGTSE DEPGPTACPSPEHDREGND GK THAGVRTDGQQQ DVSSDGAIQGGGQP HS EEQDSALARMSRGQ LLSESSTEDILAEADHLIADAANNTFNS RA TTPTKPRAGK RATSKATGP QAARRKSKD PRGT S K TL+RMTSASRSSDTRSPKRPRVYPEVSGEEVDALVSLT RALERDPSALSEIAKDASLQQGGDK
Sbjct:    1 MQWSKRAT-PATTASASKPSSAGKREGWSRVLESAKWELGSEPRDQQTGTRLRSGRWLLSAWRKTAHQFRSNMRWGSLSYIARAWEEQSTTTDICSAADGRAKADSSTCSNNNEAIQGPENAGGTDATNPAVVASFLRRRAPQGLAFALVVATVYVVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--DTRDVAERANDTRPGLAKRSDEDVDGEHAVGGKSVGGKEEEMDGRMDVGEEGTRKGTSEHDEPGPTACPSPEHDREGNDVGKVTHAGVRTDGQQQDDVSSDGAIQGGGQPSHSAEEQDSALARMSRGQSLLSESSTEDILAEADHLIADAANNTFNSIRAMTTPTKPRAGKLRATSKATGPIQAARRKSKDSPRGTPSLKLTLSRMTSASRSSDTRSPKRPRVYPEVSGEEVDALVSLTHRALERDPSALSEIAKDASLQQGGDK 480
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BLAST of mRNA_E-siliculosus-1a_M_contig72.15374.1 vs. uniprot
Match: D8LIF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF2_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 7.010e-26
Identity = 59/60 (98.33%), Postives = 59/60 (98.33%), Query Frame = 0 
Query:  424 MTSASRSSDTRSPKRPRVYPEVSGEEVDALVSLTQRALERDPSALSEIAKDASLQQGGDK 483
            MTS SRSSDTRSPKRPRVYPEVSGEEVDALVSLTQRALERDPSALSEIAKDASLQQGGDK
Sbjct:    1 MTSVSRSSDTRSPKRPRVYPEVSGEEVDALVSLTQRALERDPSALSEIAKDASLQQGGDK 60
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig72.15374.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JAH0_9PHAE5.860e-21786.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIF2_ECTSI7.010e-2698.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 159..483
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 141..158
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig72contigE-siliculosus-1a_M_contig72:257713..262763 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig72.15374.1mRNA_E-siliculosus-1a_M_contig72.15374.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig72 256448..263171 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig72.15374.1 ID=prot_E-siliculosus-1a_M_contig72.15374.1|Name=mRNA_E-siliculosus-1a_M_contig72.15374.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=484bp
MQWSKRATTPATTASASKPSSAGKRERWWRVLESAKWELGSEPRHQQTGT
RLRPGRWLLSAWRKTAHQFRSNMRWGSLSYVARAWEEQSTTTDICRAAEG
RAKADSSTCSNNNEAIQGPENAGGTDATNSAMVASFLRRRAPQGLAFALV
AATVYVVYRRRRRRPGGRPRSRRQRGERRSDVAAAAARQWWWQRAGGSGQ
EVERKDDGGGSSGGGGGGDTGDVAERVDDTRPGLAQQFGEDSDDGHAGGG
ESVGGNEEEMDSRMDVGEEGIRKGTSERDEPGPTACPSPEHDREGNDGGK
ATHAGVRTDGQQQGDVSSDGAIQGGGQPGHSVEEQDSALARMSRGQPLLS
ESSTEDILAEADHLIADAANNTFNSSRATTTPTKPRAGKPRATSKATGPT
QAARRKSKDPPRGTSSPKPTLTRMTSASRSSDTRSPKRPRVYPEVSGEEV
DALVSLTQRALERDPSALSEIAKDASLQQGGDK*
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