prot_E-siliculosus-1a_M_contig72.15359.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig72.15359.1
Unique Nameprot_E-siliculosus-1a_M_contig72.15359.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length340
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig72.15359.1 vs. uniprot
Match: A0A6H5JAC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAC9_9PHAE)

HSP 1 Score: 631 bits (1628), Expect = 6.920e-228
Identity = 325/339 (95.87%), Postives = 331/339 (97.64%), Query Frame = 0 
Query:    1 MKSGSKIHSLQVTTHEDRIGNSDRLSGRQQDALEKGTTRDGGLPRARGGNNTTRDLAAAPAQHVDLNPDELTVEVPGLRVHAPWPGLHGACEGCGAPSVSGLGSGPTECDHCHRQIPGGEGGFRGKSKAPAAAAVGGEKAGKAGVVAVTSSRKVALSDERAKALAWAGGAMXXXXXXXXXXXXVTWRGIPFSLFSALSPWLAIYLPIPLGFLNGGWSVHCAKSGHIQHHSTGSCASRGGMCGTAWGCSGPSCALNLGLDLGLLITAVLAALPAGASARGCDYDCFWLLCFPCAPGGGEGMAAALVLTALGLAFAAGFKMWIMAPTLLSGPNSEQDFLPW 339
            MKSGSKIHSLQVTTHEDRI NSDRL GRQQDALEKGTTRDG LPRARGGN+TTRD+AAAPAQHVDLNPD+L VEVPGLRVHAPWPGLHGACEGCG PSVSGLGSGPTEC+HCHRQIPGGEGGFRGKSKAPAAAAVGGEKAGKAGVVAVTSSRKVALSDERAKALAWAGGAMXXXXXXXXXXXXVTWRGIPFSLFSALSPWLAIYLPIPLGFLNGGWSVHCAKSGHI+HHSTGSCASRGGMCGTAWGCSGPSCALNLGLDLGLLITAVLAALPAGASARGCDY CFWLLCFPCAPGGGEGMAAALVLTALGLAFA GFKMWIMAP L+SGPNSEQDFLPW
Sbjct:    1 MKSGSKIHSLQVTTHEDRIANSDRLCGRQQDALEKGTTRDGDLPRARGGNSTTRDIAAAPAQHVDLNPDDLKVEVPGLRVHAPWPGLHGACEGCGTPSVSGLGSGPTECEHCHRQIPGGEGGFRGKSKAPAAAAVGGEKAGKAGVVAVTSSRKVALSDERAKALAWAGGAMXXXXXXXXXXXXVTWRGIPFSLFSALSPWLAIYLPIPLGFLNGGWSVHCAKSGHIRHHSTGSCASRGGMCGTAWGCSGPSCALNLGLDLGLLITAVLAALPAGASARGCDYSCFWLLCFPCAPGGGEGMAAALVLTALGLAFATGFKMWIMAPALVSGPNSEQDFLPW 339
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig72.15359.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JAC9_9PHAE6.920e-22895.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..162
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 322..339
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 192..212
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 213..300
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 187..191
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 163..186
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 301..321
NoneNo IPR availableTMHMMTMhelixcoord: 295..317
NoneNo IPR availableTMHMMTMhelixcoord: 253..275
NoneNo IPR availableTMHMMTMhelixcoord: 196..218
NoneNo IPR availableTMHMMTMhelixcoord: 164..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig72contigE-siliculosus-1a_M_contig72:145696..148849 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig72.15359.1mRNA_E-siliculosus-1a_M_contig72.15359.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig72 145696..148849 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig72.15359.1 ID=prot_E-siliculosus-1a_M_contig72.15359.1|Name=mRNA_E-siliculosus-1a_M_contig72.15359.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=340bp
MKSGSKIHSLQVTTHEDRIGNSDRLSGRQQDALEKGTTRDGGLPRARGGN
NTTRDLAAAPAQHVDLNPDELTVEVPGLRVHAPWPGLHGACEGCGAPSVS
GLGSGPTECDHCHRQIPGGEGGFRGKSKAPAAAAVGGEKAGKAGVVAVTS
SRKVALSDERAKALAWAGGAMLTTSSLLLLLLLVTWRGIPFSLFSALSPW
LAIYLPIPLGFLNGGWSVHCAKSGHIQHHSTGSCASRGGMCGTAWGCSGP
SCALNLGLDLGLLITAVLAALPAGASARGCDYDCFWLLCFPCAPGGGEGM
AAALVLTALGLAFAAGFKMWIMAPTLLSGPNSEQDFLPW*
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