prot_E-siliculosus-1a_M_contig72.15358.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig72.15358.1
Unique Nameprot_E-siliculosus-1a_M_contig72.15358.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length395
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig72.15358.1 vs. uniprot
Match: A0A6H5JAD8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAD8_9PHAE)

HSP 1 Score: 471 bits (1212), Expect = 5.210e-165
Identity = 244/251 (97.21%), Postives = 246/251 (98.01%), Query Frame = 0 
Query:  144 MAGXXXXXXXXXXXXFAAAFSMVEQALELSPLDHAEAMGLETWEAAGSSGTIAGFKGRKVDWVSHCTINEPDGSTRECLRAWVMPMFDVPHLSITLGSGPNGLTAEMDLVAKDDVMYAKAYREQYYGGPTTAWWDAIMQNPNVVPAKVSMDLKERSLASPVHFSVTMPDTAENAAVLGNAAQEIAAIWLGFLDDAAEIARVRRGTMLSRDSEVRRTWWAVTGNDKALGDRGQEIAAGMAGPGDMGYTGQAS 394
            MAG  XXXXXXXXXXFAAAFSMVEQALELSPLDHAEAMGLETWEAAGSSGTIAGFKG+KVDWVS CTINE DGSTRECLRAWVMPMFDVPHLSITLGSGPNGLTAEMDLVAKDDVMYAKAYREQYYGGPTTAWW+AIMQNPNVVPAKVSMDLKERSLASPVHFSVTMPDTAENAAVLGNAAQEIAAIWLGFLDDA EIARVRRGTMLSRDSEVRRTWWAVTGNDKALGDRGQEIAAGMAGPGDMGYTGQAS
Sbjct:    1 MAGGGXXXXXXXXXXFAAAFSMVEQALELSPLDHAEAMGLETWEAAGSSGTIAGFKGKKVDWVSRCTINEADGSTRECLRAWVMPMFDVPHLSITLGSGPNGLTAEMDLVAKDDVMYAKAYREQYYGGPTTAWWEAIMQNPNVVPAKVSMDLKERSLASPVHFSVTMPDTAENAAVLGNAAQEIAAIWLGFLDDATEIARVRRGTMLSRDSEVRRTWWAVTGNDKALGDRGQEIAAGMAGPGDMGYTGQAS 251
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BLAST of mRNA_E-siliculosus-1a_M_contig72.15358.1 vs. uniprot
Match: D8LIG6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIG6_ECTSI)

HSP 1 Score: 423 bits (1088), Expect = 4.390e-145
Identity = 290/302 (96.03%), Postives = 294/302 (97.35%), Query Frame = 0 
Query:    1 MKVACSVALVVMAGSPHGGAGFHAGSARTGNMRSQRIMRMAAGKWEPSGAKWAPPRANPQPQVSHPGAPARXXXXXXXXXXXNPAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPAAPTPPXXMAGXXXXXXXXXXXXFAAAFSMVEQALELSPLDHAEAMGLETWEAAGSSGTIAGFKGRKVDWVSHCTINEPDGSTRECLRAWVMPMFDVPHLSITLGSGPNGLTAEMDLVAKDDVMYAKAYREQYYGGPTTAWWDAIMQNPNVVPAKVSMDLKERSLAS 302
            MK+ACSVALVVMAGSPHGGAGFHAG+ARTGNMRS RIMRMAAGKWEPSGAKWAPPRA+PQPQVSHPGAPARXXXXXXXXXXXNPAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPAAPTPPXXMA XXXXXXXXXXXXFAAAFSMVEQALELSPLDHAEAMGLETWEAAGSSGTIAGFKGRKVDWVSHCTINEPDGSTRECLRAWVMPMFDVPHLSITLGSGPNGLTAEMDLVAKDDVMYAKAYREQYYGGPTTAWWDAIMQNPNVVPAK S   + RS AS
Sbjct:    1 MKIACSVALVVMAGSPHGGAGFHAGTARTGNMRSHRIMRMAAGKWEPSGAKWAPPRADPQPQVSHPGAPARXXXXXXXXXXXNPAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPAAPTPPXXMAXXXXXXXXXXXXXFAAAFSMVEQALELSPLDHAEAMGLETWEAAGSSGTIAGFKGRKVDWVSHCTINEPDGSTRECLRAWVMPMFDVPHLSITLGSGPNGLTAEMDLVAKDDVMYAKAYREQYYGGPTTAWWDAIMQNPNVVPAKASSTTRRRSPAS 302
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BLAST of mRNA_E-siliculosus-1a_M_contig72.15358.1 vs. uniprot
Match: A0A836CMT3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMT3_9STRA)

HSP 1 Score: 212 bits (539), Expect = 1.070e-62
Identity = 111/234 (47.44%), Postives = 144/234 (61.54%), Query Frame = 0 
Query:  161 AAFSMVEQALELSPLDHAEAMGLETWEAAGSSGTIAGFKGRKVDWVSHCTINEPDGSTRECLRAWVMPMFDVPHLSITLGSGPNGLTAEMDLVAKDDVMYAKAYREQYYGGPTTAWWDAIMQNPNVVPAKVSMDLKERSLASPVHFSVTMPDTAENAAVLGNAAQEIAAIWLGFLDDAAEIARVRRGTMLSRDSEVRRTWWAVTGNDKALGDRGQEIAAGMAGPGDMGYTGQAS 394
            AAF  +E    L P DHAEAM L+ +     SGTI G+ G KVDW S  +   P G     L  W  PM+DVPHL++ L    + LT + DL+AKDD MY++ Y E YYGG T AW+++I+ N +     V   L+ R+LASP    V+ P++ E A +   +  +I  +WL +L DAAEIARVRRGTMLSRD+ +RR  WAVT  D   GD+ Q+IA  +AGPGDM Y GQ S
Sbjct:   52 AAFKKIEADQALRPSDHAEAMELDAFTVGDVSGTIEGYLGTKVDWCSKVSTKGPGGDASYALSCWTFPMYDVPHLTVALSKSGDTLTLKADLIAKDDTMYSQDYLESYYGGETLAWYESIVGNAHTTSLPVPATLRGRALASPGLVHVSGPES-EVAELFAASVDKITDMWLAWLADAAEIARVRRGTMLSRDNILRRMSWAVTCKDPMFGDQSQQIATAIAGPGDMAYVGQYS 284
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig72.15358.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JAD8_9PHAE5.210e-16597.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIG6_ECTSI4.390e-14596.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CMT3_9STRA1.070e-6247.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.1500.20coord: 160..382
e-value: 2.1E-25
score: 91.2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..394
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig72contigE-siliculosus-1a_M_contig72:137291..145272 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig72.15358.1mRNA_E-siliculosus-1a_M_contig72.15358.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig72 136031..145272 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig72.15358.1 ID=prot_E-siliculosus-1a_M_contig72.15358.1|Name=mRNA_E-siliculosus-1a_M_contig72.15358.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=395bp
MKVACSVALVVMAGSPHGGAGFHAGSARTGNMRSQRIMRMAAGKWEPSGA
KWAPPRANPQPQVSHPGAPARVSHPGAPPHVSNPAQVSNPAQVSNPAQVS
NPAQVSSPAQVSSPTQVSSPAQVSSPGQVSQPASPAAPTPPPPMAGGGGG
GGAGAGAGFAAAFSMVEQALELSPLDHAEAMGLETWEAAGSSGTIAGFKG
RKVDWVSHCTINEPDGSTRECLRAWVMPMFDVPHLSITLGSGPNGLTAEM
DLVAKDDVMYAKAYREQYYGGPTTAWWDAIMQNPNVVPAKVSMDLKERSL
ASPVHFSVTMPDTAENAAVLGNAAQEIAAIWLGFLDDAAEIARVRRGTML
SRDSEVRRTWWAVTGNDKALGDRGQEIAAGMAGPGDMGYTGQAS*
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