prot_E-siliculosus-1a_M_contig72.15351.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig72.15351.1
Unique Nameprot_E-siliculosus-1a_M_contig72.15351.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length534
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig72.15351.1 vs. uniprot
Match: A0A6H5J880_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J880_9PHAE)

HSP 1 Score: 702 bits (1813), Expect = 9.000e-250
Identity = 475/533 (89.12%), Postives = 484/533 (90.81%), Query Frame = 0 
Query:    1 MSTPQRGGYSSRVKGKYRGRTSXXXXXXXXXXXXXXQKVGTPGGAGKGVQFEAALDPGTPAAAGTVGLGGGGDDNATGASSGGEGVDTFSYDDVSNLATVTPVVTKRSVSRAEVESSGGSATDKDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPAVARGESKSDISNNSSNGNAAAVPAATVEGGAGVPVQQPAVGEGGDADEASAAVVDPRSALSSSMEKQAGPRSRPEVGKKPQRSSTAKSARKVPRYPQVLLETAGHAKPRNMSDALKIAVAAEIKGLIRKRGKEPDCKAAVQACKDSGMQVLKHAKEICADLDPRPKVDLKEVRKALAEESRRYHAQIAEEEKLWAIEEQKCLALAESTKRSQQAKVQAHDEKHAQGHVPSLTGNKEVRALLEPLDQDEEESAAANPSLDGTDTCKRVCDEIVASTNHMILNATAIGRCLQEMGSGVADAQETKERLAQVFRQVSLKSYPNVNDPKAGIAAMLK 533
            MSTPQRGGYSSR KGK RGRT+  X           QKVGTPGGAGKGVQFEAA DPGTPAAAGT GLG GGDDNATGASSGGEGVDTFSYDDVSNLATVTPVVTKRSVSRAEVES GGSA          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPA A  ESKSD+SN SSNG+AAAVPA   EGGAGVP QQPAV EGGDADEAS+AVVDPRSALSSS E+QAGPRSRP VGKK +RSSTAKSARKVPRYPQVL ETAG+AKPRNMSDALKIAVA+EIKGLIRKRGKEPDCKAAVQACKDSGMQ+LKHAKEICA LDPRPKVDLKEVRKALAEESRRYHAQIAEEEKLWAIEEQKCLALAESTKRSQ AKVQAHDE  A GHVPSLTGNKEVRALLEPLDQDEEE AA NPSLDGTDTCKRVCDEIVASTNHMILNATAIGRCLQEMGSGVADAQETKERLAQVFRQVSLKSYPNVNDPKAGIAAMLK
Sbjct:    1 MSTPQRGGYSSRSKGKNRGRTTSSXSRSRAPPLQKKQKVGTPGGAGKGVQFEAAFDPGTPAAAGTAGLGRGGDDNATGASSGGEGVDTFSYDDVSNLATVTPVVTKRSVSRAEVESGGGSAXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPAAAGNESKSDMSNISSNGHAAAVPAVAAEGGAGVPAQQPAVAEGGDADEASSAVVDPRSALSSSKEQQAGPRSRPNVGKKTRRSSTAKSARKVPRYPQVLPETAGYAKPRNMSDALKIAVASEIKGLIRKRGKEPDCKAAVQACKDSGMQILKHAKEICAGLDPRPKVDLKEVRKALAEESRRYHAQIAEEEKLWAIEEQKCLALAESTKRSQ-AKVQAHDEIQAHGHVPSLTGNKEVRALLEPLDQDEEECAAVNPSLDGTDTCKRVCDEIVASTNHMILNATAIGRCLQEMGSGVADAQETKERLAQVFRQVSLKSYPNVNDPKAGIAAMLK 525
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BLAST of mRNA_E-siliculosus-1a_M_contig72.15351.1 vs. uniprot
Match: D8LIH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIH4_ECTSI)

HSP 1 Score: 414 bits (1064), Expect = 7.710e-141
Identity = 219/223 (98.21%), Postives = 220/223 (98.65%), Query Frame = 0 
Query:  311 MSDALKIAVAAEIKGLIRKRGKEPDCKAAVQACKDSGMQVLKHAKEICADLDPRPKVDLKEVRKALAEESRRYHAQIAEEEKLWAIEEQKCLALAESTKRSQQAKVQAHDEKHAQGHVPSLTGNKEVRALLEPLDQDEEESAAANPSLDGTDTCKRVCDEIVASTNHMILNATAIGRCLQEMGSGVADAQETKERLAQVFRQVSLKSYPNVNDPKAGIAAMLK 533
            MSDALKIAVAAEIKGLIRKRGKEPDCKAAVQACKDSGMQVLKHAKEICADLDPRPKVDLKEVRKALAEESRRYHAQIAEEEKLWAIEEQKCLALAESTKRSQ AKVQAH+EK A GHVPSLTGNKEVRALLEPLDQDEEESAAANPSLDGTDTCKRVCDEIVASTNHMILNATAIGRCLQEMGSGVADAQETKERLAQVFRQVSLKSYPNVNDPKAGIAAMLK
Sbjct:    1 MSDALKIAVAAEIKGLIRKRGKEPDCKAAVQACKDSGMQVLKHAKEICADLDPRPKVDLKEVRKALAEESRRYHAQIAEEEKLWAIEEQKCLALAESTKRSQ-AKVQAHNEKQAHGHVPSLTGNKEVRALLEPLDQDEEESAAANPSLDGTDTCKRVCDEIVASTNHMILNATAIGRCLQEMGSGVADAQETKERLAQVFRQVSLKSYPNVNDPKAGIAAMLK 222
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig72.15351.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J880_9PHAE9.000e-25089.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIH4_ECTSI7.710e-14198.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..180
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 203..533
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 181..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig72contigE-siliculosus-1a_M_contig72:81868..88246 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig72.15351.1mRNA_E-siliculosus-1a_M_contig72.15351.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig72 81632..89963 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig72.15351.1 ID=prot_E-siliculosus-1a_M_contig72.15351.1|Name=mRNA_E-siliculosus-1a_M_contig72.15351.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=534bp
MSTPQRGGYSSRVKGKYRGRTSSSSSSSRAPPPQKKQKVGTPGGAGKGVQ
FEAALDPGTPAAAGTVGLGGGGDDNATGASSGGEGVDTFSYDDVSNLATV
TPVVTKRSVSRAEVESSGGSATDKDTQQQQQQQQQQQRPQQGGKGKKRAA
ERQGGAAEGTDTEEEYESGGARRRKKRKQEAAAAAAAAAAAAVTAAALPA
VARGESKSDISNNSSNGNAAAVPAATVEGGAGVPVQQPAVGEGGDADEAS
AAVVDPRSALSSSMEKQAGPRSRPEVGKKPQRSSTAKSARKVPRYPQVLL
ETAGHAKPRNMSDALKIAVAAEIKGLIRKRGKEPDCKAAVQACKDSGMQV
LKHAKEICADLDPRPKVDLKEVRKALAEESRRYHAQIAEEEKLWAIEEQK
CLALAESTKRSQQAKVQAHDEKHAQGHVPSLTGNKEVRALLEPLDQDEEE
SAAANPSLDGTDTCKRVCDEIVASTNHMILNATAIGRCLQEMGSGVADAQ
ETKERLAQVFRQVSLKSYPNVNDPKAGIAAMLK*
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