prot_E-siliculosus-1a_M_contig713.15339.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig713.15339.1
Unique Nameprot_E-siliculosus-1a_M_contig713.15339.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length176
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig713.15339.1 vs. uniprot
Match: D7FUC3_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC3_ECTSI)

HSP 1 Score: 266 bits (681), Expect = 9.840e-80
Identity = 132/177 (74.58%), Postives = 147/177 (83.05%), Query Frame = 0
Query:    3 NEEGANSKSGGAVPRQLRRLLDVLDSCN--LSRLDGNPWTEPPESIVTKGATGIRGYFEDLYAEPCRIQRNSVKIILVGQEGAGKTSLRQSMKANKAAPTGEWEEESTVFADVEPMELEGASVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAEAF-QNPDQGIGDQVEKDCRKLE 176
            +EEGA+  SGG +P QL RLLDVLD     +  L+ NPW EPPESIV KG   IRGYFEDLYAEPCR++R+SVK+ILVGQEGAGKTSLRQSMK N+A PTG+W+EESTVFADVEPMELEG+SVRVYDCAGQ AYTGLLQMFLTPRSVCVLVCNAEAF Q      G Q+ +DCRKLE
Sbjct:  194 HEEGAHGMSGGRIPSQLCRLLDVLDRAEGGVLSLEDNPWAEPPESIVAKGPKSIRGYFEDLYAEPCRVERSSVKVILVGQEGAGKTSLRQSMKTNEATPTGDWKEESTVFADVEPMELEGSSVRVYDCAGQAAYTGLLQMFLTPRSVCVLVCNAEAFGQQRANDTGGQIMEDCRKLE 370          
BLAST of mRNA_E-siliculosus-1a_M_contig713.15339.1 vs. uniprot
Match: D8LCS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS7_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 6.550e-79
Identity = 130/174 (74.71%), Postives = 144/174 (82.76%), Query Frame = 0
Query:    4 EEGANSKSGGAVPRQLRRLLDVLDSCNLSRLDGNPWTEPPESIVTKGATGIRGYFEDLYAEPCRIQRNSVKIILVGQEGAGKTSLRQSMKANKAAPTGEWEEESTVFADVEPMELEGASVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAEAF-QNPDQGIGDQVEKDCRKLE 176
            +E A   SGG +P +LRRLL+ LD  +   L GNPW EPPESIVTKG   IRGYFEDLYAEPCR+QR SVK++LVGQEGAGKTSLRQSMKAN+A PTGEW+EESTVFADV+PMELEG+SVRVYDCAGQV YTGLLQMFLTPRSVCVLVCN EAF Q        QV++DCRKLE
Sbjct:  528 QERAKRMSGGTIPSELRRLLETLDGADTD-LGGNPWAEPPESIVTKGMESIRGYFEDLYAEPCRVQRRSVKVVLVGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVQPMELEGSSVRVYDCAGQVGYTGLLQMFLTPRSVCVLVCNVEAFEQRLGSEANGQVQEDCRKLE 700          
BLAST of mRNA_E-siliculosus-1a_M_contig713.15339.1 vs. uniprot
Match: A0A6H5L650_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L650_9PHAE)

HSP 1 Score: 257 bits (657), Expect = 1.600e-78
Identity = 130/181 (71.82%), Postives = 148/181 (81.77%), Query Frame = 0
Query:    3 NEEGANSKSGGAVPRQLRRLLDVLDSCNLSR---LDGNPWTEPPESIVTKGATGIRGYFEDLYAEPCRIQRNSVKIILVGQEGAGKTSLRQSMKANKAAPTGEWEEESTVFADVEPMELEGASVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAEAFQNPDQGIG----DQVEKDCRKLE 176
            N +G +S SGG +P QL RLLD+L+S    R   L+ NPW EPPESIV KG   +RGYFEDL+A+ CRI+R  VK++LVGQEGAGKTSLRQSMKANKA PTGEW+EESTVFADVEPM+LEG+SVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNA  F+   Q +G    DQVE+DCRKLE
Sbjct:  101 NHDGGDSMSGGPMPSQLCRLLDLLESREAGRHLSLNSNPWAEPPESIVAKGLKSVRGYFEDLFADHCRIKRRGVKVVLVGQEGAGKTSLRQSMKANKATPTGEWKEESTVFADVEPMKLEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFR---QQLGSDNIDQVEEDCRKLE 278          
BLAST of mRNA_E-siliculosus-1a_M_contig713.15339.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI)

HSP 1 Score: 263 bits (671), Expect = 2.280e-78
Identity = 132/179 (73.74%), Postives = 148/179 (82.68%), Query Frame = 0
Query:    3 NEEGANSKSGGAVPRQLRRLLDVLDSCNLS---RLDGNPWTEPPESIVTKGATGIRGYFEDLYAEPCRIQRNSVKIILVGQEGAGKTSLRQSMKANKAAPTGEWEEESTVFADVEPMELEGASVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAEAF--QNPDQGIGDQVEKDCRKLE 176
            +EE ++S  GG+ PRQL RLLDVLD         LD NPW EPPESIV KGA  IRGYFEDLYAEPCR+QR+SVKIILVGQEGAGKTSLR+SMKA +A PTGEW+EESTVFADVE MELEG+S+RVYDCAGQVAYTGLLQMFLTPR+VCV+VCNAE+F  Q      G QV++DCRKLE
Sbjct:  264 HEEASHSMQGGSFPRQLCRLLDVLDRAEREVDLNLDDNPWAEPPESIVAKGAKNIRGYFEDLYAEPCRVQRSSVKIILVGQEGAGKTSLRKSMKAKEATPTGEWKEESTVFADVERMELEGSSIRVYDCAGQVAYTGLLQMFLTPRAVCVIVCNAESFGQQRGTCETGGQVKEDCRKLE 442          
BLAST of mRNA_E-siliculosus-1a_M_contig713.15339.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI)

HSP 1 Score: 261 bits (668), Expect = 3.380e-78
Identity = 134/176 (76.14%), Postives = 143/176 (81.25%), Query Frame = 0
Query:    4 EEGANSKSGGAVPRQLRRLLDVLDSCN--LSRLDGNPWTEPPESIVTKGATGIRGYFEDLYAEPCRIQRNSVKIILVGQEGAGKTSLRQSMKANKAAPTGEWEEESTVFADVEPMELEGASVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAEAF-QNPDQGIGDQVEKDCRKLE 176
            EEG N   GG +P QL RLLDVLD     +  LD NPW EPP SIV+KG T IRGYFEDLY E  R+QRNSVKIILVGQEGAGKTSLRQSMKAN A PTGEW+EESTVFADVEPM+LEG+ VRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAEAF Q      G QV++DCRKLE
Sbjct:  167 EEGGNRTLGGQLPSQLCRLLDVLDRATGGILGLDDNPWAEPPASIVSKGPTSIRGYFEDLYVESSRVQRNSVKIILVGQEGAGKTSLRQSMKANAAIPTGEWKEESTVFADVEPMQLEGSFVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAEAFGQQRGDDTGGQVKEDCRKLE 342          
BLAST of mRNA_E-siliculosus-1a_M_contig713.15339.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI)

HSP 1 Score: 258 bits (660), Expect = 1.960e-77
Identity = 135/180 (75.00%), Postives = 148/180 (82.22%), Query Frame = 0
Query:    1 VGNEEGANSKSGGAVPRQLRRLLDVLD---SCNLSRLDGNPWTEPPESIVTKGATGIRGYFEDLYAEPCRIQRNSVKIILVGQEGAGKTSLRQSMKANKAAPTGEWEEESTVFADVEPMELEGASVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAEAF-QNPDQGIGDQVEKDCRKLE 176
            V ++EG +   GGA+P QL RLL VLD     NL+ L GNPW EPPESIV KG   IRGYFEDLYAEPC I+R+SVK++LVGQEGAGKTSLRQSMKANKA PTGEW+EESTVFADVEPMELEG+SVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNA  F Q       DQVE+DCRKL+
Sbjct:   51 VHHKEGGDIMPGGAMPSQLCRLLVVLDRLSGVNLALL-GNPWAEPPESIVAKGPKSIRGYFEDLYAEPCWIKRSSVKVVLVGQEGAGKTSLRQSMKANKATPTGEWKEESTVFADVEPMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGQQLGSDNVDQVEEDCRKLQ 229          
BLAST of mRNA_E-siliculosus-1a_M_contig713.15339.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 3.210e-76
Identity = 128/182 (70.33%), Postives = 143/182 (78.57%), Query Frame = 0
Query:    1 VGNEEGANSKSGGAVPRQLRRLLDVLDSCNLSR-----LDGNPWTEPPESIVTKGATGIRGYFEDLYAEPCRIQRNSVKIILVGQEGAGKTSLRQSMKANKAAPTGEWEEESTVFADVEPMELEGASVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAEAF-QNPDQGIGDQVEKDCRKLE 176
            +G++EG    SGG +P QL RLLDVLD     +     L  NPW EPPE IV KG   +RGYFEDLYAEPCRI+R+ VK++LVGQEGAGKTSLRQSMKAN+A PTGEW+EESTVFADVE MELEG+SVRVYDCAGQVAYTGLLQMFLTPR+VCVLVCNA  F Q       DQV +DCRKLE
Sbjct:  117 IGHDEGTQRMSGGPMPSQLCRLLDVLDDIQQGKFQSLKLGTNPWVEPPEPIVVKGPKAVRGYFEDLYAEPCRIKRSIVKVVLVGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVEAMELEGSSVRVYDCAGQVAYTGLLQMFLTPRAVCVLVCNAGKFGQQTRSESNDQVGEDCRKLE 298          
BLAST of mRNA_E-siliculosus-1a_M_contig713.15339.1 vs. uniprot
Match: D7G431_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G431_ECTSI)

HSP 1 Score: 255 bits (652), Expect = 4.290e-76
Identity = 127/174 (72.99%), Postives = 145/174 (83.33%), Query Frame = 0
Query:    4 EEGANSKSGGAVPRQLRRLLDVLDSCNLSRLDGNPWTEPPESIVTKGATGIRGYFEDLYAEPCRIQRNSVKIILVGQEGAGKTSLRQSMKANKAAPTGEWEEESTVFADVEPMELEGASVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAEAF-QNPDQGIGDQVEKDCRKLE 176
            ++G    SGG++P QL RLLDVL+   +  LDGNPW EPPESIV KG   +R YFEDLYAEPCRI+R S K++LVGQEGAGK+SLRQSMKAN+  PTGEW+EESTVFADVEPMELEG+SVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNA AF Q  ++    +VE+DCRKLE
Sbjct:   76 DKGGCGMSGGSMPGQLCRLLDVLERAKIV-LDGNPWAEPPESIVDKGRKSMRSYFEDLYAEPCRIERISTKVVLVGQEGAGKSSLRQSMKANEPTPTGEWKEESTVFADVEPMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAAAFGQQLERKNSGEVEEDCRKLE 248          
BLAST of mRNA_E-siliculosus-1a_M_contig713.15339.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI)

HSP 1 Score: 256 bits (653), Expect = 8.600e-76
Identity = 128/177 (72.32%), Postives = 145/177 (81.92%), Query Frame = 0
Query:    4 EEGANSKSGGAVPRQLRRLLDVLDSC--NLSRLDGNPWTEPPESIVTKGATGIRGYFEDLYAEPCRIQRNSVKIILVGQEGAGKTSLRQSMKANKAAPTGEWEEESTVFADVEPMELEGASVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAEAF--QNPDQGIGDQVEKDCRKLE 176
            +E  +S SGG +P QL RLLDVLD        L GNPWTEPPES+V KG   IRGYFEDLYAEPCRI R+SVK++LVGQEGAGKTSLRQSMKANKA+PTG+W EESTVFA+VEPMEL+G+SVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNA  F  +   +  G+  ++DCRKLE
Sbjct:  337 KERGDSMSGGTMPSQLCRLLDVLDPVPSRYVGLGGNPWTEPPESVVAKGPKSIRGYFEDLYAEPCRITRSSVKVVLVGQEGAGKTSLRQSMKANKASPTGKWNEESTVFANVEPMELDGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGQRRGSEDCGEVEQEDCRKLE 513          
BLAST of mRNA_E-siliculosus-1a_M_contig713.15339.1 vs. uniprot
Match: A0A6H5K2U4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2U4_9PHAE)

HSP 1 Score: 237 bits (605), Expect = 5.030e-71
Identity = 117/167 (70.06%), Postives = 135/167 (80.84%), Query Frame = 0
Query:   13 GAVPRQLRRLLDVLDSCN--LSRLDGNPWTEPPESIVTKGATGIRGYFEDLYAEPCRIQRNSVKIILVGQEGAGKTSLRQSMKANKAAPTGEWEEESTVFADVEPMELEGASVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAEAF-QNPDQGIGDQVEKDCRKLE 176
            G +P QL RLLD+LD     +  L+ NPW EP ESIVTKG   IRGYFE LYAEPCR+QR+SV +ILVGQEGAG TSL QSMKAN+A  TG+W+EESTVFADVEPMELEG+SVR+YDCAGQ AYTGLLQMF+TPRSVCVL+CN EAF Q   +  G Q+ ++CRKLE
Sbjct:    5 GLIPSQLCRLLDILDRAEGGILSLEDNPWAEPLESIVTKGPKSIRGYFEVLYAEPCRLQRSSVNVILVGQEGAGNTSLCQSMKANEATSTGDWKEESTVFADVEPMELEGSSVRLYDCAGQAAYTGLLQMFMTPRSVCVLMCNVEAFGQRRGRDTGGQISENCRKLE 171          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig713.15339.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUC3_ECTSI9.840e-8074.58LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LCS7_ECTSI6.550e-7974.71LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5L650_9PHAE1.600e-7871.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUD0_ECTSI2.280e-7873.74LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FUC9_ECTSI3.380e-7876.14LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FZA1_ECTSI1.960e-7775.00LRR-GTPase of the ROCO family, incomplete sequence... [more]
A0A6H5KSZ8_9PHAE3.210e-7670.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G431_ECTSI4.290e-7672.99LRR-GTPase of the ROCO family, incomplete sequence... [more]
D8LF46_ECTSI8.600e-7672.32LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5K2U4_9PHAE5.030e-7170.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.2190coord: 46..75
e-value: 3.8E-17
score: 64.9
NoneNo IPR availablePFAMPF08477Roccoord: 74..160
e-value: 2.0E-10
score: 40.9
NoneNo IPR availableGENE3D3.40.50.300coord: 76..157
e-value: 3.8E-17
score: 64.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 67..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig713contigE-siliculosus-1a_M_contig713:8220..9854 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig713.15339.1mRNA_E-siliculosus-1a_M_contig713.15339.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig713 8219..9854 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig713.15339.1 ID=prot_E-siliculosus-1a_M_contig713.15339.1|Name=mRNA_E-siliculosus-1a_M_contig713.15339.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=176bp
VGNEEGANSKSGGAVPRQLRRLLDVLDSCNLSRLDGNPWTEPPESIVTKG
ATGIRGYFEDLYAEPCRIQRNSVKIILVGQEGAGKTSLRQSMKANKAAPT
GEWEEESTVFADVEPMELEGASVRVYDCAGQVAYTGLLQMFLTPRSVCVL
VCNAEAFQNPDQGIGDQVEKDCRKLE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase