prot_E-siliculosus-1a_M_contig71.15325.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig71.15325.1
Unique Nameprot_E-siliculosus-1a_M_contig71.15325.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length275
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig71.15325.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 1.210e-39
Identity = 112/286 (39.16%), Postives = 147/286 (51.40%), Query Frame = 0 
Query:    2 IQSTRRGDQTALRSAVMSGNKHVFEAILGVSVGRMPPLEVKNMLIPEAKRSRGLLGYAAVQSGSIELVQAVFLEV--GKELLLDMKEVHGVISAAATLGSVHMWEASTQAVTNLCGDLLPKTDPSVVLG---------------AIGSKDPTIVRAVYSFVRKLLPAETDSEGFGKFIAAGFSQWTDFVREEQEHSPDVGTGGLGWAIEVFSCFLEYPAVLDPKDVVNLSRHASEGWMRTCFLDTVASVENP--SGMTLSVALAEAAVVAPRGERRKLLSVQIKLD 268
            + S+R      L +A  SG++  FEA LG     +PP EV++ +   +  +  L+  AA +SGSIEL QAV  +   GK L      V      A+ L               +  DLL    P  VLG               A+ S+DP+IV AV  FV      E     FG FI +GFS WT  V E+   +   G GGL WAI   SC L+YP + D  D++ LSR  S  W+RTCFL+TVA  +NP   GMTLS+A A++A VAP GERRKLLS+Q ++D
Sbjct:  328 VWSSRSDSGRVLCAAASSGSRGTFEAALGSLELELPPDEVRDAMRTSSMHAELLV--AAAKSGSIELWQAVVNDTREGKALGQAKTSVVSDDKGASLLLRTAXXXXXXXXXXXVRHDLL-LVQPEQVLGFLSRNSGLANVLVKGAVRSRDPSIVGAVIQFVH-CTRLEQGVLDFGAFIGSGFSDWTTVVLEKSNFAQGAGGGGLDWAIGALSCLLQYPTMFDTADLIQLSRERSAEWLRTCFLETVACSDNPFVPGMTLSIAFAKSASVAPEGERRKLLSLQERVD 609
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig71.15325.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLB1_ECTSI1.210e-3939.16Ankyrin Repeat Transient Receptor Potential Channe... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig71contigE-siliculosus-1a_M_contig71:764742..774866 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig71.15325.1mRNA_E-siliculosus-1a_M_contig71.15325.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig71 763814..776275 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig71.15325.1 ID=prot_E-siliculosus-1a_M_contig71.15325.1|Name=mRNA_E-siliculosus-1a_M_contig71.15325.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=275bp
MIQSTRRGDQTALRSAVMSGNKHVFEAILGVSVGRMPPLEVKNMLIPEAK
RSRGLLGYAAVQSGSIELVQAVFLEVGKELLLDMKEVHGVISAAATLGSV
HMWEASTQAVTNLCGDLLPKTDPSVVLGAIGSKDPTIVRAVYSFVRKLLP
AETDSEGFGKFIAAGFSQWTDFVREEQEHSPDVGTGGLGWAIEVFSCFLE
YPAVLDPKDVVNLSRHASEGWMRTCFLDTVASVENPSGMTLSVALAEAAV
VAPRGERRKLLSVQIKLDICCWKS*
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