prot_E-siliculosus-1a_M_contig71.15307.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig71.15307.1
Unique Nameprot_E-siliculosus-1a_M_contig71.15307.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length256
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig71.15307.1 vs. uniprot
Match: D8LDR9_ECTSI (NUOI homolog, NADH dehydrogenase (Ubiquinone) subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDR9_ECTSI)

HSP 1 Score: 397 bits (1019), Expect = 3.450e-138
Identity = 211/255 (82.75%), Postives = 212/255 (83.14%), Query Frame = 0
Query:    1 MVLATVRGRGSLLAHRAVLVASGAARTSNAVSVLPRRLFSNMPPNPPSVKSKERSEFREAKLPVDNIEFKETGLLTTIDRLSNIMFMAEIFRALWLSAEVFFKPKVTINYPFEKGPLSPRFRGEHALRRYPSGEERCISCKLCEAICPAQAITIEAEQREDGSRKTTRYDIDMTKCIYCGFCQASLSFADWTTLFLSSFSDQEACPVDAIVEGPNYEFATETHEELLYDKEKLLANGDRWEVAIAQNLAADHPYR 255
            MVLATVRGRGSLLAHRAVLVASGAARTSNAV+VLPRRL SNMPPNPPSVKSKERSEFREAKLPVDNIEFKETGLLTTIDRLSNIMFMAEIFRALWLSAEVFFKPKVTINYPFEKGPLSPRFRGEHALRRYPSGEERCISCKLCEAICPAQAITIEAEQREDGSRKTT                                          IVEGPNYEFATETHEELLYDKEKLLANGDRWEVAIAQNLAADHPYR
Sbjct:    1 MVLATVRGRGSLLAHRAVLVASGAARTSNAVAVLPRRLLSNMPPNPPSVKSKERSEFREAKLPVDNIEFKETGLLTTIDRLSNIMFMAEIFRALWLSAEVFFKPKVTINYPFEKGPLSPRFRGEHALRRYPSGEERCISCKLCEAICPAQAITIEAEQREDGSRKTTXXXXXXXXXXXXXXXXXXXXXXX-------------------IVEGPNYEFATETHEELLYDKEKLLANGDRWEVAIAQNLAADHPYR 236          
BLAST of mRNA_E-siliculosus-1a_M_contig71.15307.1 vs. uniprot
Match: A0A4S8IBF3_MUSBA (4Fe-4S ferredoxin-type domain-containing protein n=3 Tax=Musa TaxID=4640 RepID=A0A4S8IBF3_MUSBA)

HSP 1 Score: 248 bits (634), Expect = 1.880e-79
Identity = 127/203 (62.56%), Postives = 142/203 (69.95%), Query Frame = 0
Query:   79 DRLSNIMFMAEIFRALWLSAEVFFKPKVTINYPFEKGPLSPRFRGEHALRRYPSGEERCISCKLCEAI--------------------------CPAQAITIEAEQREDGSRKTTRYDIDMTKCIYCGFCQASLSFADWTTLFLSSFSDQEACPVDAIVEGPNYEFATETHEELLYDKEKLLANGDRWEVAIAQNLAADHPYR 255
            +R  N +F+ E+ R L L+ + FF+ KVTINYPFEKGPLSPRFRGEHALRRYP+GEERCI+CKLCEAI                          CPAQAITIEAE+REDGSR+TTRYDIDMTKCIYCGFCQ                   EACPVDAIVEGPN+EFATETHEELLYDKEKLL NGDRWE  IA+NL ++  YR
Sbjct:   67 ERSINTLFLTEMVRGLMLTLKYFFERKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAIIRVWSVSISQYVSISLYMITNPDTRICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQ-------------------EACPVDAIVEGPNFEFATETHEELLYDKEKLLENGDRWETEIAENLRSESLYR 250          
BLAST of mRNA_E-siliculosus-1a_M_contig71.15307.1 vs. uniprot
Match: A0A2N9HQV2_FAGSY (4Fe-4S ferredoxin-type domain-containing protein n=2 Tax=fabids TaxID=91835 RepID=A0A2N9HQV2_FAGSY)

HSP 1 Score: 248 bits (633), Expect = 3.250e-79
Identity = 128/211 (60.66%), Postives = 143/211 (67.77%), Query Frame = 0
Query:   79 DRLSNIMFMAEIFRALWLSAEVFFKPKVTINYPFEKGPLSPRFRGEHALRRYPSGEERCISCKLCEA----------------------------------ICPAQAITIEAEQREDGSRKTTRYDIDMTKCIYCGFCQASLSFADWTTLFLSSFSDQEACPVDAIVEGPNYEFATETHEELLYDKEKLLANGDRWEVAIAQNLAADHPYR 255
            +R  N +F+ E+ R L L+ + FF+PKVTINYPFEKGPLSPRFRGEHALRRYP+GEERCI+CKLCEA                                  ICPAQAITIEAE+REDGSR+TTRYDIDMTKCIYCGFCQ                   EACPVDAIVEGPN+EFATETHEELLYDKEKLL NGDRWE  IA+NL ++  YR
Sbjct:   65 ERSINTLFLTEMVRGLMLTLKYFFEPKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAVLEITTKQDCYEARVRQVGHRTRTGYCWGTGTAWICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQ-------------------EACPVDAIVEGPNFEFATETHEELLYDKEKLLENGDRWESEIAENLRSESLYR 256          
BLAST of mRNA_E-siliculosus-1a_M_contig71.15307.1 vs. uniprot
Match: A0A1B6QHS2_SORBI (4Fe-4S ferredoxin-type domain-containing protein n=19 Tax=Poaceae TaxID=4479 RepID=A0A1B6QHS2_SORBI)

HSP 1 Score: 243 bits (620), Expect = 2.570e-77
Identity = 126/205 (61.46%), Postives = 139/205 (67.80%), Query Frame = 0
Query:   79 DRLSNIMFMAEIFRALWLSAEVFFKPKVTINYPFEKGPLSPRFRGEHALRRYPSGEERCISCKLCEA----------------------------ICPAQAITIEAEQREDGSRKTTRYDIDMTKCIYCGFCQASLSFADWTTLFLSSFSDQEACPVDAIVEGPNYEFATETHEELLYDKEKLLANGDRWEVAIAQNLAADHPYR 255
            +R  N +F+ E+ R L L+ + FF   VTINYPFEKGPLSPRFRGEHALRRY SGEERCI+CKLCEA                            ICPAQAITIEAE+REDGSR+TTRYDIDMTKCIYCGFCQ                   EACPVDAIVEGPN+EFATETHEELLYDKEKLL NGDRWE  IA+NL ++  YR
Sbjct:   66 ERSINTLFLTEMVRGLMLTLKYFFDRNVTINYPFEKGPLSPRFRGEHALRRYESGEERCIACKLCEALLRWQLLIHNSGYLRKKNHCSHGTNDVQICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQ-------------------EACPVDAIVEGPNFEFATETHEELLYDKEKLLENGDRWETEIAENLRSESLYR 251          
BLAST of mRNA_E-siliculosus-1a_M_contig71.15307.1 vs. uniprot
Match: A0A8J6L6A5_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6L6A5_TENMO)

HSP 1 Score: 239 bits (611), Expect = 6.330e-77
Identity = 122/195 (62.56%), Postives = 136/195 (69.74%), Query Frame = 0
Query:   79 DRLSNIMFMAEIFRALWLSAEVFFKPKVTINYPFEKGPLSPRFRGEHALRRYPSGEERCISCKLCEAICPAQ------------------AITIEAEQREDGSRKTTRYDIDMTKCIYCGFCQASLSFADWTTLFLSSFSDQEACPVDAIVEGPNYEFATETHEELLYDKEKLLANGDRWEVAIAQNLAADHPYR 255
            DR +  +F+ E+ R   ++    FK   TINYPFEKGPLSPRFRGEHALRRYPSGEERCI+CKLCEAICPAQ                  AITIEAE+R DGSR+TTRYDIDMTKCIYCGFCQ                   EACPVDAIVEGPN+EF+TETHEELLY+KEKLL NGD+WE  IA N+ ADH YR
Sbjct:    8 DRAAQKVFLTELVRGFGVTLGHIFKEPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQVELSTFPPTLPLTCFVTKAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQ-------------------EACPVDAIVEGPNFEFSTETHEELLYNKEKLLNNGDKWESEIAANIHADHLYR 183          
BLAST of mRNA_E-siliculosus-1a_M_contig71.15307.1 vs. uniprot
Match: A0A565ASL5_9BRAS (4Fe-4S ferredoxin-type domain-containing protein n=11 Tax=Brassicaceae TaxID=3700 RepID=A0A565ASL5_9BRAS)

HSP 1 Score: 238 bits (607), Expect = 2.100e-75
Identity = 123/205 (60.00%), Postives = 139/205 (67.80%), Query Frame = 0
Query:   76 TTIDRLSNIMFMAEIFRALWLSAEVFFKPKVTINYPFEKGPLSPRFRGEHALRRYPSGEERCISCK-------LCE------------------AICPAQAITIEAEQREDGSRKTTRYDIDMTKCIYCGFCQASLSFADWTTLFLSSFSDQEACPVDAIVEGPNYEFATETHEELLYDKEKLLANGDRWEVAIAQNLAADHPYR 255
            T  +R  N +F+ E+ R L L+ + FF PKVTINYPFEKGPLSPRFRGEHALRRYP+GEERC+          +CE                   +CPAQAITIEAE+REDGSR+TTRYDIDMTKCIYCGFCQ                   EACPVDAIVEGPN+EFATETHEELLYDKEKLL NGDRWE  IA+NL ++  YR
Sbjct:   62 TVFERSINTLFLTEMVRGLSLTLKYFFDPKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCLPVNSVRLEFVICEHHDITIRLKLGFLTDAYHQVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQ-------------------EACPVDAIVEGPNFEFATETHEELLYDKEKLLENGDRWETEIAENLRSESLYR 247          
BLAST of mRNA_E-siliculosus-1a_M_contig71.15307.1 vs. uniprot
Match: UPI001884EE19 (LOW QUALITY PROTEIN: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like n=2 Tax=Muroidea TaxID=337687 RepID=UPI001884EE19)

HSP 1 Score: 237 bits (604), Expect = 2.840e-75
Identity = 116/190 (61.05%), Postives = 134/190 (70.53%), Query Frame = 0
Query:   66 NIEFKETGLLTTIDRLSNIMFMAEIFRALWLSAEVFFKPKVTINYPFEKGPLSPRFRGEHALRRYPSGEERCISCKLCEAICPAQAITIEAEQREDGSRKTTRYDIDMTKCIYCGFCQASLSFADWTTLFLSSFSDQEACPVDAIVEGPNYEFATETHEELLYDKEKLLANGDRWEVAIAQNLAADHPYR 255
            N+   E  + +  DR +  +   E+FR L ++    F+   TINYPFE GPLSP FRGEHAL RYPSGEE CI+CKL EAICPAQAITIEAE R DGSR+TTRYDIDMTKCIYCGFCQ                   EACPVD IVEGPN+EF+TETHEELLY+KEKLL NGD+WE  I+ N+ AD+ YR
Sbjct:   40 NVSELEMDMKSVTDRAAQTLLWTELFRGLGMTLSYLFREPATINYPFEXGPLSPCFRGEHALCRYPSGEEHCIACKLYEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQ-------------------EACPVDTIVEGPNFEFSTETHEELLYNKEKLLNNGDKWEAEISANIQADYLYR 210          
BLAST of mRNA_E-siliculosus-1a_M_contig71.15307.1 vs. uniprot
Match: A0A803VMU5_FICAL (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial n=3 Tax=Passeriformes TaxID=9126 RepID=A0A803VMU5_FICAL)

HSP 1 Score: 236 bits (601), Expect = 9.830e-75
Identity = 120/212 (56.60%), Postives = 138/212 (65.09%), Query Frame = 0
Query:   66 NIEFKETGLLTTIDRLSNIMFMAEIFRALWLSAEVFFKPKVTINYPFEKGPLSPRFRGEHALRRYPSGEERCISCKLCEAICPAQ----------------------AITIEAEQREDGSRKTTRYDIDMTKCIYCGFCQASLSFADWTTLFLSSFSDQEACPVDAIVEGPNYEFATETHEELLYDKEKLLANGDRWEVAIAQNLAADHPYR 255
            N+      + +  DR +  +   E+ R L ++    F+   TINYPFEKGPLSPRFRGEHALRRYPSGEERCI+CKLCEA+CPAQ                      AITIEAE R DGSR+TTRYDIDMTKCIYCGFCQ                   EACPVDAIVEGPN+EF+TETHEELLY+KEKLL NGD+WE  IA N+ AD+ YR
Sbjct:   38 NVREPAMDMRSITDRAAQTLLWTELVRGLAMTLSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAVCPAQVSLPPXXXXXXXGLHVTVSPCQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQ-------------------EACPVDAIVEGPNFEFSTETHEELLYNKEKLLNNGDKWEAEIAANIQADYLYR 230          
BLAST of mRNA_E-siliculosus-1a_M_contig71.15307.1 vs. uniprot
Match: A0A075AEY3_9TREM (4Fe-4S ferredoxin-type domain-containing protein n=2 Tax=Eumetazoa TaxID=6072 RepID=A0A075AEY3_9TREM)

HSP 1 Score: 230 bits (586), Expect = 8.510e-74
Identity = 114/154 (74.03%), Postives = 122/154 (79.22%), Query Frame = 0
Query:  102 FKPKVTINYPFEKGPLSPRFRGEHALRRYPSGEERCISCKLCEAICPAQAITIEAEQREDGSRKTTRYDIDMTKCIYCGFCQASLSFADWTTLFLSSFSDQEACPVDAIVEGPNYEFATETHEELLYDKEKLLANGDRWEVAIAQNLAADHPYR 255
            FK   TINYPFEKGPLSPRFRGEHALRRYPSGE+    CKLCEAICPAQAITIEAE R DGSR+TTRYDIDMTKCIYCGFCQ                   EACPVDAIVEGPN+E++TETHEELLY+KEKLL NGDRWEV IA+NL AD+ YR
Sbjct:    7 FKEPATINYPFEKGPLSPRFRGEHALRRYPSGED----CKLCEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQ-------------------EACPVDAIVEGPNFEYSTETHEELLYNKEKLLQNGDRWEVEIAENLKADYLYR 137          
BLAST of mRNA_E-siliculosus-1a_M_contig71.15307.1 vs. uniprot
Match: A0A371HJF1_MUCPR (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-B, mitochondrial (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371HJF1_MUCPR)

HSP 1 Score: 233 bits (594), Expect = 1.560e-73
Identity = 116/162 (71.60%), Postives = 124/162 (76.54%), Query Frame = 0
Query:  106 VTINYPFEKGPLSPRFRGEHALRRYPSGEERCISCKLCEA------------ICPAQAITIEAEQREDGSRKTTRYDIDMTKCIYCGFCQASLSFADWTTLFLSSFSDQEACPVDAIVEGPNYEFATETHEELLYDKEKLLANGDRWEVAIAQNLAADHPYR 255
            V INYPFEKGPLSPRFRGEHALRRYP+GEERCI+CKLCEA            ICPAQAITIEAE+REDGSR+TTRYDIDMTKCIYCGFCQ                   EACPVDAIVEGPN+EFATETHEELLYDKEKLL NGDRWE  IA+NL ++  YR
Sbjct:   98 VLINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEALYVDVTKCSLSLICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQ-------------------EACPVDAIVEGPNFEFATETHEELLYDKEKLLENGDRWETEIAENLRSESLYR 240          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig71.15307.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDR9_ECTSI3.450e-13882.75NUOI homolog, NADH dehydrogenase (Ubiquinone) subu... [more]
A0A4S8IBF3_MUSBA1.880e-7962.564Fe-4S ferredoxin-type domain-containing protein n... [more]
A0A2N9HQV2_FAGSY3.250e-7960.664Fe-4S ferredoxin-type domain-containing protein n... [more]
A0A1B6QHS2_SORBI2.570e-7761.464Fe-4S ferredoxin-type domain-containing protein n... [more]
A0A8J6L6A5_TENMO6.330e-7762.56Uncharacterized protein n=1 Tax=Tenebrio molitor T... [more]
A0A565ASL5_9BRAS2.100e-7560.004Fe-4S ferredoxin-type domain-containing protein n... [more]
UPI001884EE192.840e-7561.05LOW QUALITY PROTEIN: NADH dehydrogenase [ubiquinon... [more]
A0A803VMU5_FICAL9.830e-7556.60NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A075AEY3_9TREM8.510e-7474.034Fe-4S ferredoxin-type domain-containing protein n... [more]
A0A371HJF1_MUCPR1.560e-7371.60NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPFAMPF12838Fer4_7coord: 136..209
e-value: 8.5E-10
score: 39.1
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPROSITEPS513794FE4S_FER_2coord: 128..157
score: 9.869
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPROSITEPS513794FE4S_FER_2coord: 167..185
score: 6.416
IPR010226NADH-quinone oxidoreductase, chain ITIGRFAMTIGR01971TIGR01971coord: 94..183
e-value: 5.2E-36
score: 120.9
IPR010226NADH-quinone oxidoreductase, chain IPANTHERPTHR10849NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 8, MITOCHONDRIALcoord: 202..255
coord: 66..184
IPR010226NADH-quinone oxidoreductase, chain IHAMAPMF_01351NDH1_NuoIcoord: 84..239
score: 23.509
NoneNo IPR availableGENE3D3.30.70.3270coord: 202..254
e-value: 3.1E-6
score: 28.9
coord: 110..185
e-value: 4.4E-27
score: 96.6
NoneNo IPR availablePANTHERPTHR10849:SF20NADH DEHYDROGENASE (UBIQUINONE) FE-S PROTEIN 8, (NADH-COENZYME Q REDUCTASE)-RELATEDcoord: 202..255
coord: 66..184
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..255
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSUPERFAMILY548624Fe-4S ferredoxinscoord: 110..184
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved sitePROSITEPS001984FE4S_FER_1coord: 137..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig71contigE-siliculosus-1a_M_contig71:619525..621510 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig71.15307.1mRNA_E-siliculosus-1a_M_contig71.15307.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig71 619525..621510 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig71.15307.1 ID=prot_E-siliculosus-1a_M_contig71.15307.1|Name=mRNA_E-siliculosus-1a_M_contig71.15307.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=256bp
MVLATVRGRGSLLAHRAVLVASGAARTSNAVSVLPRRLFSNMPPNPPSVK
SKERSEFREAKLPVDNIEFKETGLLTTIDRLSNIMFMAEIFRALWLSAEV
FFKPKVTINYPFEKGPLSPRFRGEHALRRYPSGEERCISCKLCEAICPAQ
AITIEAEQREDGSRKTTRYDIDMTKCIYCGFCQASLSFADWTTLFLSSFS
DQEACPVDAIVEGPNYEFATETHEELLYDKEKLLANGDRWEVAIAQNLAA
DHPYR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0179004Fe4S_Fe_S_CS
IPR010226NADH_quinone_OxRdtase_chainI
IPR0178964Fe4S_Fe-S-bd